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KJC3_008931-T1, KJC3_008931-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008931-T1
Unique NameKJC3_008931-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3506947..3508571+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008931-T1 ID=KJC3_008931-T1|Name=KJC3_008931-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1625bp|location=Sequence derived from alignment at ch6:3506947..3508571+ (Aspergillus niger KJC3)
CCTCCAGTAAAAATAACCCTCGCGCAATCAGATCCCAATTCTATTTGGAT
TAGTTTCGACAAACTAACTTACTATCCCACTCCAATCTGTTTCTGCATAA
CAAAAATGGCCGAGACATCCTCATCCATCCCGACTCCCCCGCACTGCACC
GCCGATTTCTGCTTGATCCCAGTGGGTGATTTCATTTCCTATCCAGTTCC
CCCCAACTCTACCTACCTTGCACTTAGTTATTCGCCTCATGCTGCCTGAC
TATCTCCACATCGTACCCATGCCATGGCTACTACTTATCTATCCATGCAA
TCACTACCCAGTTCGGTCTGCATGTCATCAGACCGAGGGGGTGAAAGTGA
CGTGACACATTCATTCATTCATTCCCATCTTGTCCAGCATCAAGCAATCA
ATCAAGCAGTCATCCCACATGCGTGGATGCACCAGGATCATGACCCCACG
AAGCAAACCTTTGGCCATGTCCTATTTTGATTCCCTGAACACAGCTAAGA
ACTTACGCTACTGGCGATAATAGATCGGCACATCATCTCCCTCCGTGTCC
GCCCAAATAGCCGATGTTCAGCGCCTTATTGAGAAATCCGGCCTGAAATA
CGTCATGCATTCAGCTGGGACCACGCTCGGTATGTATACCGCTATTGGAT
TTATCCTCCGATAGCCAATATTATTGATGTGCGCGTGCGCATATGTATGT
TTATTGGCTGACGTCTATCATAGAGGGTCCTTGGGATAGAGTTCATCAGG
TTATTGGTCAAGCGCATACGATTCTTCATCAGCAGGGTATTGTGAGGATT
CAAACAGATATTCGCGTTGGCTCGAGGTGTGTAATTGCTTTTCTTGTTGG
CTTGTTGGCTTGCTTCTGTTGTTTTCTTGGTTTGATGTTGTGGTGGGGGG
CTTGGAGACTGTTGTTATCTACTTGCTTGGGTGGGCGGTGGTTACACAAG
CTAACTATTCTTGCTTACAGAACCGATAAGGAACAGTCCTTTGAGGACAA
GGTGAACAAGGTCCGTGAGTTGTTGAAAAACGACTAAGCAGATACTACAA
GGGTATGTGCGTGGTACTCGATTGAGTGGAAACGCTCCAGCAGTTGCACC
TTTCTTTATATGCTATCGCTTATGGACATGGTATAACGATCATATCAGTT
AGATACACTGTGCAACATATGATAATCATCCGAACGCCAACCTGGTACCC
TTATTTATAGCAAAAGGAATGTCGTGAGGCTCGTCCAAACCTTAAAAACC
AGCGCTGATGTTGCAACTGTAAATATGTGGAATAGATGCAAATGACAATG
TACTAAATAGGCTAGTAAATTCAAAATGAAGGGAGAAAGGACGGTGAAGA
CACCACAAAGTATGAGGTCTCAGCGGTCAGCTTAAACTGCAATACCGCCG
CCCAGCAGACTTCCCCAATCTCCACCAGCCCAGATCCACTCGCCCATGCT
GGGATTCGCCCCATCTTTGGCTTTTTGGACGACTTCGACCAGGCCCTTGA
AAACGTTGGAGTACGTGGAGGCCGAGCTTGTGACGCTGACAGAAGTCAGG
TTCTTCCGTCCAGTAGCGTTGGTGACATTGTTTAGACTGTCCACGGTATC
GATGGCGGGACCCTTGTCGAAGAAG
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Coding sequence (CDS) from alignment at ch6:3506947..3508571+

>KJC3_008931-T1 ID=KJC3_008931-T1|Name=KJC3_008931-T1|organism=Aspergillus niger KJC3|type=CDS|length=1368bp|location=Sequence derived from alignment at ch6:3506947..3508571+ (Aspergillus niger KJC3)
ATGGCCGAGACATCCTCATCCATCCCGACTCCCCCGCACTGCACCGCCGA
TTTCTGCTTGATCCCAATCGGCACATCATCTCCCTCCGTGTCCGCCCAAA
TAGCCGATGTTCAGCGCCTTATTGAGAAATCCGGCCTGAAATACGTCATG
CATTCAGCTGGGACCACGCTCGAGGGTCCTTGGGATAGAGTTCATCAGGT
TATTGGTCAAGCGCATACGATTCTTCATCAGCAGGGTATTGTGAGGATTC
AAACAGATATTCGCGTTGGCTCGAGAACCGATAAGGAACAGTCCTTTGAG
GACAAGGTGAACAAGGTCCGTGAGTTGTTGAAAAACGACTAAATGGCCGA
GACATCCTCATCCATCCCGACTCCCCCGCACTGCACCGCCGATTTCTGCT
TGATCCCAATCGGCACATCATCTCCCTCCGTGTCCGCCCAAATAGCCGAT
GTTCAGCGCCTTATTGAGAAATCCGGCCTGAAATACGTCATGCATTCAGC
TGGGACCACGCTCGAGGGTCCTTGGGATAGAGTTCATCAGGTTATTGGTC
AAGCGCATACGATTCTTCATCAGCAGGGTATTGTGAGGATTCAAACAGAT
ATTCGCGTTGGCTCGAGAACCGATAAGGAACAGTCCTTTGAGGACAAGGT
GAACAAGGTCCGTGAGTTGTTGAAAAACGACTAAATGGCCGAGACATCCT
CATCCATCCCGACTCCCCCGCACTGCACCGCCGATTTCTGCTTGATCCCA
ATCGGCACATCATCTCCCTCCGTGTCCGCCCAAATAGCCGATGTTCAGCG
CCTTATTGAGAAATCCGGCCTGAAATACGTCATGCATTCAGCTGGGACCA
CGCTCGAGGGTCCTTGGGATAGAGTTCATCAGGTTATTGGTCAAGCGCAT
ACGATTCTTCATCAGCAGGGTATTGTGAGGATTCAAACAGATATTCGCGT
TGGCTCGAGAACCGATAAGGAACAGTCCTTTGAGGACAAGGTGAACAAGG
TCCGTGAGTTGTTGAAAAACGACTAAATGGCCGAGACATCCTCATCCATC
CCGACTCCCCCGCACTGCACCGCCGATTTCTGCTTGATCCCAATCGGCAC
ATCATCTCCCTCCGTGTCCGCCCAAATAGCCGATGTTCAGCGCCTTATTG
AGAAATCCGGCCTGAAATACGTCATGCATTCAGCTGGGACCACGCTCGAG
GGTCCTTGGGATAGAGTTCATCAGGTTATTGGTCAAGCGCATACGATTCT
TCATCAGCAGGGTATTGTGAGGATTCAAACAGATATTCGCGTTGGCTCGA
GAACCGATAAGGAACAGTCCTTTGAGGACAAGGTGAACAAGGTCCGTGAG
TTGTTGAAAAACGACTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008931KJC3_008931Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008931-T1KJC3_008931-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008931-T1.utr5p1KJC3_008931-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008931-T1.exon1KJC3_008931-T1.exon1Aspergillus niger KJC3exon
KJC3_008931-T1.exon2KJC3_008931-T1.exon2Aspergillus niger KJC3exon
KJC3_008931-T1.exon3KJC3_008931-T1.exon3Aspergillus niger KJC3exon
KJC3_008931-T1.exon4KJC3_008931-T1.exon4Aspergillus niger KJC3exon
KJC3_008931-T1.exon5KJC3_008931-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008931-T1.cdsKJC3_008931-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008931-T1.utr3p1KJC3_008931-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_008931-T1.utr3p2KJC3_008931-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029756
DBxrefInterPro:IPR002767
DBxrefPFAM:PF01910
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3506947..3508571 +
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