|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3509010..3513020- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008933-T1 ID=KJC3_008933-T1|Name=KJC3_008933-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4011bp|location=Sequence derived from alignment at ch6:3509010..3513020- (Aspergillus niger KJC3)
GCAGAAGAAAGCCGCCAGTTACCTGTGTTCACATGTGCCACTAACACACT
TCGTGATAGAGTGCGATTTACGAGGATGGTCAGATTTACTGCCGCCTTCC
TTTCGCTCTCCTTTCCTCAAACCTCATGCGCCCGGCTCTTCTTCGACTAC
TGAAGAGGCCGTCAGCTCTCTCGGTTCTCGACTCCCTGATATCGATGCCA
ATTGGGTTTGAACAATTGGACGTTCGACGCACAGCTAAATGTGTTCGATG
CTTATCCAAGACTCACAAACAGGCGAGAAGTGCGCCAGCTGCGGAGCTGC
AACAAACGCCTGCGAACGATTCCTCTTTTCCATCAACGAGGCGAGCATTC
AGCTTCCGCATATACGAAATTAATACGCCACAAAAACAGGCCGCAGCTAA
AAGTGGAAGCTCTGGCGACACGGCTCAAAGCTTCACCGGGATAAGCTCTC
GTAGCCTTGCGTTACAACCAGAGAGATTGGAATTTGAATCGGACATAGGA
CATACGGATGACATCGGAACCCGATTAATAGACGACCCGGTGCATCGGAA
CGATTTCGCTCTCTGGGAGGAGTTACTCCGCTACCGGCAACGTCATTATG
GTGATAAAGGCACGTTGGATATTTGGGAGGGCTTGACGAGCCGCGTTGAT
GGTGTGCAACTGCCCGTTGAAGGAGAAGTCGCTGATTTCTTTTGGCAAAG
CTTTGTGGAAGCTGGCATACGGCACGGTGTCATTCTGAACGAAATCGCTA
ATTATGCGCTGGCGCTTTGGAATACAACGGGGAAGCGCTGGGAGGGTTTC
TATGAGGCTGTCGTTGGTGGCTTTATTGACCGTGGCATGACGCAGCAGGC
TGTTGAATGGCACAAACGCCTTCATCATCCTCATTTGACACGCCCGAACG
ATATTTTACATGTCTTCCGGCCGACCGTTCCTGCTCGACAGCAACATAGA
ATTACTGGAGCGATAAAGACCAGGGGGCGGGCTGCTTCATCAAGCTTATG
GGCCTTCCGTAGCATCTGCCGTATGACTCCAGGCCACCAGATCTATGCTC
CCATCATGTCTACCCTGTTGCGCTGTGGCCGTCTTGACGATGCGCTCTCA
ATGCACAGACTCCTCATTCAAGAAAATGACCATCCACATTCCTTCGACGA
ATTCGAGCCAGTACTAGAGAGCGCCAAACAGTACGGGCCGTGGTCGTCCT
ACCAAGAGCTCCACCGCTATGCCTCCCAACGATTCCCTGAAAAGCTAAAC
GAAACCGATGATCCTGACACAGTTGCTGCAGAAACTCAAGGAAAGGTTGC
GCATGAAGAGAGACCAATAAAGGATGAATTCGGCGCCCGAATTTTTGCTA
CGGAGGCTCTTAACTTCGATACAATCCTTTCTGGCTTGAAAATGTTTGGC
GTGCCAGCTCTTGGACCGCAATCTCTACGAGAGATGGCGCTCAGAGCTCG
GGGGAGCCAAGATATACTGAGTAAGCTCCGAAAGCTCGAACGAGCAGGCA
TCTCGCTGGGGAACTCTGTCTTCGTGCGTCTTCTTCGCAAGCTCGCCACG
GAGAACCGCGACATACTCTTATCGGACTTGCTCCACAGCGATGAGCATCC
CGACGTCCTTGAGGATGCGCGCATACAAGAGTCTCTACTTCTATCTTACT
ATCTTAGTAAGGATTGGCGTCATTATCATATGACCCTGGCAATCTTAAGT
GAACTATCCAACGAAGGGCCGGCTCTGTTCAACATTCATTTCAGAAAACA
TCTTGCAGCTGGCGAGTGGACTCTGGCCTCCAAGCTGGTTGATGAAATGG
CACTGCGCAGTCAAAGCCTCACCAAAGAAAGCATTGACTTCATGGTTGAA
AAGGTCCTGACTCCTCGCAGGCCCGGTGTCAGCCCAATCAAGGGTCAGCG
TCGCTCAGAAGTCGTGGAAGTAACCTTTCTCTTCCGTGTCTTACGACGCA
TCGTTCCTGTGGGTGCTTCTGTGTCTCCTGACCTTTGGGTCGAGATGATC
AAGCGATTCGGCATGATGAATTGTTGGGATGAGCTTCGAACATGTTGTCT
CTGGCTGGCCCGTCATTATTCTTCTAAGCCCCAACAAGACCACGCTCCTC
TCCAGATCATATCGCTATCGACTGTACAGCAATCGTCTCATGCTATCTCA
CCGGACCAACAGCGCAATTCCATCCTCGGGGCTATATTCAGCAAACAGAC
GCAAGCCGCTCTTGTCTATTGGGGGTTCCGGATGCGTGTTTCCTCCAAAC
GAGACGACTATAATCCTTTCCACACGGATGATGAGAACTTTGTTCCTTGG
GTGCGTGGTCTTGTTCTCCTTCGCGAGCTTGGACAGAACGGTGTGCAGCT
TTGGACGAGATGGATCAGACGGGCTTGCCGGCACCGGCTTGCGGTGCTAT
ACGGACGACCTCGCCGCTCCAGTCGTCACATGAGTCGCATGTTGCGACGG
GAAAACCCATATAGTGTGGAGCGAGTCCTGGGAGATATTGACCGTGCGTG
GGGACAGCCCCTCCTGCTCCAAGGTTGGGAGCCCAGGGATGTGTATCGGC
TGGTTAACCCACCCAGCTCGAAGATGTCTCAACGTCGAACACGTCGAACC
TTCTTGAGGGAAAAGAGCCTGCGAGGGGCAGCCTTTGTGAGTAGCCGGTG
AAATTATATATGTACAATATACCACATAGCAACACATACGATAGAACAAC
AATTTTACTGTAATACTAGCCCAGCACAAGACACACCGCTCACGTGAAGA
AACCGGGGCAACGCGGCCACACAACAAACGAGACAAACATGGGCGGGCTT
CGCCACGCGCAGATGGCGTGGCCCGTCAGCAAATGCGAAACAGGAGCAGT
CATGACCGACCCTTGTTCCTAAGAATAGGCTGGCAGGCAACGCGGCCAGA
CTCCATCTCCCAGAGCCTTGTTCATACCGGCCCACCGTCACTGGTAGATC
AACACTGCCCTCTTAACTTTCTCATGACCCGTAGGGGTGATCCAAGCCAA
ATGGCGCGGTTGTTGCCGTGGTTCAGGCTTTAGGAGTCCATGTAGTGCGT
CTTGGTAGTCCACACTCTCTGCACAATTCACTCATTGCTTTCACGAGTGG
GGTTTATTGATTATTGCTCTGCCTGCTCGCCTGCATCATCCACATCCTTT
ACACATCCTTTATGGCCCGAAGGTTGGATGCTTACTGTGTCTGATTCTTC
TTTCTCCCTTTCCCCCTCTTTTCTTTGCTGAAACAATAATTCTCACTCAT
CTGGCGCATCAATTAATTAAACCCTTGAATTAAGTAGACGGATAATTTCC
CCTTTTCTTGATATACGCGCATTCGGTGTGTATCACTTGTTGCTTGGACT
TCGCAGCCAATTCTTTTTGCATGAGTCCTACCGGCTTATATAGCATCTGA
ACGATTGATATCCTTTTCCACCCAACCAGAACGCGCAATCAGCATGCTAG
GACTGGGAGTTCTAGCGCTCCTTCCCTTCGCAGCGGCGAAGGCTGTACGG
CCGCGATCCACTGCATGCAACAACTCCCCAGACTTGTGTTCCAAGTCATA
CGGAGAAATCACTCATCTGGGTGCACACGACAGTCCGTTTCTACGAGATG
CCTCGACAGATTACTCTACCTTTGGAGACCAGTGAGTTGGATTGGGAAAG
CAGAACGTCAATGCGGTTTGTTGACCACGTCACAGATACTACAATACTAC
GCTCCAGCTTGACGCTGGTGTCCGTCTCGTCACAGCTCAAGTCCATAAGT
CGAATTCACAGTGGCGTCTATGTCACTCTAGTTGCGATTATCTAGATGCA
GGACTGTTGAGTACATGGCTGTCAGATATCAAAAGCTGGTTGGACTCCAA
CCCCAATGATGGTACGTTGGTGACAGACTGCAATTATTCCCAGACGAACT
GAAAACTAATATATTCTGTCAAATCTCAGTTGTGACTGTTTTGCTGGTCA
ACTCAGACGACGCAACAGCTTCTGATCTGCACTCGCAATTCGAAACGGCC
AATCTCACCAA back to topCoding sequence (CDS) from alignment at ch6:3509010..3513020- >KJC3_008933-T1 ID=KJC3_008933-T1|Name=KJC3_008933-T1|organism=Aspergillus niger KJC3|type=CDS|length=2526bp|location=Sequence derived from alignment at ch6:3509010..3513020- (Aspergillus niger KJC3)
ATGCGCCCGGCTCTTCTTCGACTACTGAAGAGGCCGTCAGCTCTCTCGGT
TCTCGACTCCCTGATATCGATGCCAATTGGGTTTGAACAATTGGACGTTC
GACGCACAGCTAAATGTGTTCGATGCTTATCCAAGACTCACAAACAGGCG
AGAAGTGCGCCAGCTGCGGAGCTGCAACAAACGCCTGCGAACGATTCCTC
TTTTCCATCAACGAGGCGAGCATTCAGCTTCCGCATATACGAAATTAATA
CGCCACAAAAACAGGCCGCAGCTAAAAGTGGAAGCTCTGGCGACACGGCT
CAAAGCTTCACCGGGATAAGCTCTCGTAGCCTTGCGTTACAACCAGAGAG
ATTGGAATTTGAATCGGACATAGGACATACGGATGACATCGGAACCCGAT
TAATAGACGACCCGGTGCATCGGAACGATTTCGCTCTCTGGGAGGAGTTA
CTCCGCTACCGGCAACGTCATTATGGTGATAAAGGCACGTTGGATATTTG
GGAGGGCTTGACGAGCCGCGTTGATGGTGTGCAACTGCCCGTTGAAGGAG
AAGTCGCTGATTTCTTTTGGCAAAGCTTTGTGGAAGCTGGCATACGGCAC
GGTGTCATTCTGAACGAAATCGCTAATTATGCGCTGGCGCTTTGGAATAC
AACGGGGAAGCGCTGGGAGGGTTTCTATGAGGCTGTCGTTGGTGGCTTTA
TTGACCGTGGCATGACGCAGCAGGCTGTTGAATGGCACAAACGCCTTCAT
CATCCTCATTTGACACGCCCGAACGATATTTTACATGTCTTCCGGCCGAC
CGTTCCTGCTCGACAGCAACATAGAATTACTGGAGCGATAAAGACCAGGG
GGCGGGCTGCTTCATCAAGCTTATGGGCCTTCCGTAGCATCTGCCGTATG
ACTCCAGGCCACCAGATCTATGCTCCCATCATGTCTACCCTGTTGCGCTG
TGGCCGTCTTGACGATGCGCTCTCAATGCACAGACTCCTCATTCAAGAAA
ATGACCATCCACATTCCTTCGACGAATTCGAGCCAGTACTAGAGAGCGCC
AAACAGTACGGGCCGTGGTCGTCCTACCAAGAGCTCCACCGCTATGCCTC
CCAACGATTCCCTGAAAAGCTAAACGAAACCGATGATCCTGACACAGTTG
CTGCAGAAACTCAAGGAAAGGTTGCGCATGAAGAGAGACCAATAAAGGAT
GAATTCGGCGCCCGAATTTTTGCTACGGAGGCTCTTAACTTCGATACAAT
CCTTTCTGGCTTGAAAATGTTTGGCGTGCCAGCTCTTGGACCGCAATCTC
TACGAGAGATGGCGCTCAGAGCTCGGGGGAGCCAAGATATACTGAGTAAG
CTCCGAAAGCTCGAACGAGCAGGCATCTCGCTGGGGAACTCTGTCTTCGT
GCGTCTTCTTCGCAAGCTCGCCACGGAGAACCGCGACATACTCTTATCGG
ACTTGCTCCACAGCGATGAGCATCCCGACGTCCTTGAGGATGCGCGCATA
CAAGAGTCTCTACTTCTATCTTACTATCTTAGTAAGGATTGGCGTCATTA
TCATATGACCCTGGCAATCTTAAGTGAACTATCCAACGAAGGGCCGGCTC
TGTTCAACATTCATTTCAGAAAACATCTTGCAGCTGGCGAGTGGACTCTG
GCCTCCAAGCTGGTTGATGAAATGGCACTGCGCAGTCAAAGCCTCACCAA
AGAAAGCATTGACTTCATGGTTGAAAAGGTCCTGACTCCTCGCAGGCCCG
GTGTCAGCCCAATCAAGGGTCAGCGTCGCTCAGAAGTCGTGGAAGTAACC
TTTCTCTTCCGTGTCTTACGACGCATCGTTCCTGTGGGTGCTTCTGTGTC
TCCTGACCTTTGGGTCGAGATGATCAAGCGATTCGGCATGATGAATTGTT
GGGATGAGCTTCGAACATGTTGTCTCTGGCTGGCCCGTCATTATTCTTCT
AAGCCCCAACAAGACCACGCTCCTCTCCAGATCATATCGCTATCGACTGT
ACAGCAATCGTCTCATGCTATCTCACCGGACCAACAGCGCAATTCCATCC
TCGGGGCTATATTCAGCAAACAGACGCAAGCCGCTCTTGTCTATTGGGGG
TTCCGGATGCGTGTTTCCTCCAAACGAGACGACTATAATCCTTTCCACAC
GGATGATGAGAACTTTGTTCCTTGGGTGCGTGGTCTTGTTCTCCTTCGCG
AGCTTGGACAGAACGGTGTGCAGCTTTGGACGAGATGGATCAGACGGGCT
TGCCGGCACCGGCTTGCGGTGCTATACGGACGACCTCGCCGCTCCAGTCG
TCACATGAGTCGCATGTTGCGACGGGAAAACCCATATAGTGTGGAGCGAG
TCCTGGGAGATATTGACCGTGCGTGGGGACAGCCCCTCCTGCTCCAAGGT
TGGGAGCCCAGGGATGTGTATCGGCTGGTTAACCCACCCAGCTCGAAGAT
GTCTCAACGTCGAACACGTCGAACCTTCTTGAGGGAAAAGAGCCTGCGAG
GGGCAGCCTTTGTGAGTAGCCGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008933-T1.utr5p1 | KJC3_008933-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3509010..3513020 - |
|
