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KJC3_008934-T1, KJC3_008934-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008934-T1
Unique NameKJC3_008934-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3513239..3514549+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008934-T1 ID=KJC3_008934-T1|Name=KJC3_008934-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1311bp|location=Sequence derived from alignment at ch6:3513239..3514549+ (Aspergillus niger KJC3)
CATCTGCCATTGTCCCTCCTACCTCCTCCATAACCCCCATTGTCGCTTTC
GCGCACCGCCAAAATGTTCCGCACCGCTCCTCGTATGGCTGGGTATGTTC
ACTGATTTCATTTCCTTACTTGTTCCCCCGCATGGCTTCCTGAGCGCGGC
CGGGCTGACGGCTTGTCGGTCGGGACTGTTGGCTGCTCAATTGCGTAAAT
ATTCCATGCAATTGGGACTCGGAAGCGAACCTTTACACTGGATTGGACTT
GCTAACATATTTGCCTTCCCATAGATTCGTGTTCCGTGAGAACCGTGTCC
CTTACTACCAGCGTCTTTTCCAGCAGCACGACGGCAAGCGCCAGTGGTGG
AAGGTCCGTTGATCTGCGAATCGATCGTAACTTACGAAAGCAACAAGAAA
GCCTAACAAACGAACTCTCTATAGACTGAGCGCAGTGGTTACCTCATGTG
GCCCTACCTGATCTCCGTCTACGGAATGGGCATCGGTAAGCGCCTTAAAT
ACATAAATAAAGATGGACCACGGCTAATGCATATCTTCCTTAGCTACCAC
CTACGCTATGGGTCGTATGGTCTTTGTGAGTTGCACCTTGGAATTTGGGT
TTCAAAGGGGAACCTGTGGAATAACAGATTTACTAATGCTCATCCTAGGG
CCACAAGACCTGGTTCGGCAAGGCGTAAATGGGGTCCTCGCCAACTTTGA
CACAGTGTACCTCTATTTCTATGATAGGCAGCTAGAAAGAAAGATAACTG
ACGTTGTATATAACTTTCTCCAAAGCGTCAAAGCGTTAATATTTGCCTCA
TGTTCTATCGTATATCGCCGAGTACCCTGTGTCCTAGCCATACTCGGCTT
GTTTTGGGTGGATTTACAAGAATCGACCAACAAACCGAGTAGAAGTCGGA
TGGAAGGAGTCTATGGCTGTACCCTTACATGCGTCTGAAGATACATGCCA
TAGCATATAAAGGTTGCAAGACCTAGTAAACGCTTATGGACTTACTACAA
TGACACGTTGGGACGCTGCTGGACTTCCTCGGTTCAGCTAGCATACCCTG
CTCCAGGGTCATGAACATGGTATATTGTTCAGCTGCAATGGCCGCTTCCC
CTCGCAAGACTGCCAAGTGTGGCTATCGTCGCTCAGAGTTATTGTATGTA
GTTACCTGATCAAGGTGAAGCTTGTCCGTGGATTAGTCATCCATGGATGC
ATGGCACTTTATCCAAATTGGGAAACAAGATACGGCCAAATAGTTGACAA
TCTGCGGAAGGCCATCTAACGTTGGGCTGATAGTTCAACCTCACAATCTC
CAAAATGTTCA
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Coding sequence (CDS) from alignment at ch6:3513239..3514549+

>KJC3_008934-T1 ID=KJC3_008934-T1|Name=KJC3_008934-T1|organism=Aspergillus niger KJC3|type=CDS|length=1155bp|location=Sequence derived from alignment at ch6:3513239..3514549+ (Aspergillus niger KJC3)
ATGTTCCGCACCGCTCCTCGTATGGCTGGATTCGTGTTCCGTGAGAACCG
TGTCCCTTACTACCAGCGTCTTTTCCAGCAGCACGACGGCAAGCGCCAGT
GGTGGAAGACTGAGCGCAGTGGTTACCTCATGTGGCCCTACCTGATCTCC
GTCTACGGAATGGGCATCGCTACCACCTACGCTATGGGTCGTATGGTCTT
TGGCCACAAGACCTGGTTCGGCAAGGCGTAAATGTTCCGCACCGCTCCTC
GTATGGCTGGATTCGTGTTCCGTGAGAACCGTGTCCCTTACTACCAGCGT
CTTTTCCAGCAGCACGACGGCAAGCGCCAGTGGTGGAAGACTGAGCGCAG
TGGTTACCTCATGTGGCCCTACCTGATCTCCGTCTACGGAATGGGCATCG
CTACCACCTACGCTATGGGTCGTATGGTCTTTGGCCACAAGACCTGGTTC
GGCAAGGCGTAAATGTTCCGCACCGCTCCTCGTATGGCTGGATTCGTGTT
CCGTGAGAACCGTGTCCCTTACTACCAGCGTCTTTTCCAGCAGCACGACG
GCAAGCGCCAGTGGTGGAAGACTGAGCGCAGTGGTTACCTCATGTGGCCC
TACCTGATCTCCGTCTACGGAATGGGCATCGCTACCACCTACGCTATGGG
TCGTATGGTCTTTGGCCACAAGACCTGGTTCGGCAAGGCGTAAATGTTCC
GCACCGCTCCTCGTATGGCTGGATTCGTGTTCCGTGAGAACCGTGTCCCT
TACTACCAGCGTCTTTTCCAGCAGCACGACGGCAAGCGCCAGTGGTGGAA
GACTGAGCGCAGTGGTTACCTCATGTGGCCCTACCTGATCTCCGTCTACG
GAATGGGCATCGCTACCACCTACGCTATGGGTCGTATGGTCTTTGGCCAC
AAGACCTGGTTCGGCAAGGCGTAAATGTTCCGCACCGCTCCTCGTATGGC
TGGATTCGTGTTCCGTGAGAACCGTGTCCCTTACTACCAGCGTCTTTTCC
AGCAGCACGACGGCAAGCGCCAGTGGTGGAAGACTGAGCGCAGTGGTTAC
CTCATGTGGCCCTACCTGATCTCCGTCTACGGAATGGGCATCGCTACCAC
CTACGCTATGGGTCGTATGGTCTTTGGCCACAAGACCTGGTTCGGCAAGG
CGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008934KJC3_008934Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008934-T1KJC3_008934-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008934-T1.utr5p1KJC3_008934-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008934-T1.exon1KJC3_008934-T1.exon1Aspergillus niger KJC3exon
KJC3_008934-T1.exon2KJC3_008934-T1.exon2Aspergillus niger KJC3exon
KJC3_008934-T1.exon3KJC3_008934-T1.exon3Aspergillus niger KJC3exon
KJC3_008934-T1.exon4KJC3_008934-T1.exon4Aspergillus niger KJC3exon
KJC3_008934-T1.exon5KJC3_008934-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008934-T1.cdsKJC3_008934-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008934-T1.utr3p1KJC3_008934-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR039297
DBxrefPFAM:PF02238
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3513239..3514549 +
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