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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3532640..3534752+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008944-T1 ID=KJC3_008944-T1|Name=KJC3_008944-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2113bp|location=Sequence derived from alignment at ch6:3532640..3534752+ (Aspergillus niger KJC3)
CCGGATTATCGCTGGCATGCCCATTGAAGACCGCCTACATTGCGTCAGTT
GTCTATTCCTTGATGCCTAGAAGTAATAAAAATCTATGTCGCTATACTCT
CACCTGGGCGTGCTATCACGGCGGCGGGCATTGAGGTCTTTGCATGTTTC
ACCATCGCTGTGCCGCCATGTCTCCATCGACGTCAACACCAGAGCTTCAT
ATACCGAGCCCACTCCGTCCCACCTGGTCAGATTCGCTCTGACGGGTACC
ACGAAACCCGCTCACAATGACGTCTCCAATCCGGAGCTTGACAAGCACCT
CTCGGACATATTTCTCGGTGATTGGCCCTTAGCGTCTCTACCACCACCTT
TTTGGAGCTCTTCTGGTCGACAGCCACGGAGCCCCGATGAAATTGGGTCG
TTCAAAGCCCTGAAACATGACGTACGAAACCTGCGTCACTTGCAGGTATT
CATTGAAAGAAGTGTCAATGAAGCAGAAGGCGGTCTGCTTCTACAGACAC
AGTCCTGCGCCCTTTTAGCGCAAGCGCTAAATCGTTGCCAGCGAAAGAAT
TCCTACGGCGAAATTCTCTCGGCGCTCAATGCTATCATTACAAGACTGGA
GAAGCTGGGAGTACCACGTACGGATAATATATACTTTTTGGGGATGTACT
ATGCTGCACTATCATTGTCCGTGCCGGCGCTTGAAAGGTTTCTGGATGGA
TACCTTTCCGTTAGCCTGTGGCCTATGGACATCCTAGCAAGCAAATCTCT
AGTGAATGCGCTCCTCAATGCCCTTCACTATCTGAGGTTCCGTGAGGTTA
GTATTGATACGAACGCGATACTGGAAATAATCGAGGGAGGTAAGCAACGC
AGGAAGAAAAACCTACATGACCTTTTGTCCTGGGGCGATTCTGCCGGTCC
AACAACGCATCGTGGGCATTACCTTTGCCTACTCGCGAGACTAAAGAGCG
AAGACCTTCTGTCTGAAGTATGGAGGCAAACGATGTGGAGACTTTCGCCG
AACACTCCACCTGAAATGTACCAATGTATGTATACTTGTATAGTTACTCT
GATGGAAAGTGGTGATGTTCTCCGAGCTACGGATTACTTGCAAGAAGTGT
CGGAACGCTCCCAAGGAATTCTGCCTGGTATATCGGAGTTCAAAGACGTC
AACACACTGCTTGAGTCAGAAGTTCTTGGTCCCTTGTTGCCTCGGATGGC
AGGCGAGAAAGAGTACTTGAAGCTTCTTGAGGCTCAACTAATACAGATCG
AGAACAAGATGGGTCTCAGTTGGGATTCCGAAGGCCTCTATCACACAAAT
ATCAGTGATCCGCACTCAATAATCTCTGAGACACCCCTCTTCAATATCGA
CGGTGACAGCACTGGCTATGAGAGCACTGCGCGCTTAATTGCCGAAATCA
AAGCCCTCGGATGCTCCAGGTCAGTGACAGATCTCGGGAAGATTGCAGAA
ATGCTTGACGAACACGAGGGAGACGTGATCCCTGTATCTTTGCCCTCAAC
TAAAGGCCAGGATGTGGAGTACGCTTGGTTCCCCCGGTATTCTTCATTTC
GGCGTTCGGGGGCCTCTTCATCTGCTGAAAGAGAGGGTACCGAGCCTTGG
ACACCTTCAACATTGGGTTTAGTTCGTGTCAGCTGCAATAGCAGTGGATC
CCCTCTCGAACGCTCCATTCATGTGATGCAGCTCGGTCGTTTAGCAAGGA
GAGCCAGGTGCCCACATGATCAGGATCCAACTTATGATACTCTTTGGGAA
GAGACCGAGCATATGGTTACCTGGGATCGTGTCTATGGCCAATTCATCGC
TGTATACGTTGGACCAAGCGACGGGCATATCGAGACTCGCATAGAGTCAC
GAGCTGCACGAGCGCGATCTGGTATTGAAGCGATCACCGCATTCTCTCTC
CCTGGTGATACGGAACCAGTTTCACAGGGTGATCTGATATCCTTTATTGG
AAATGCGTCTATGCATTATTACATCGAGGAAGACCCAAGCCCGGACCTGA
TATACTAATTGCTTCTTTTTCTGGTCACTGGTGTACATAGACATCGAGCT
CTTAGTGCTTGCTCAGCATGAATAGCCTCGTTTCTGATACGATGCATTTT
CAGCAATTACCAT back to topCoding sequence (CDS) from alignment at ch6:3532640..3534752+ >KJC3_008944-T1 ID=KJC3_008944-T1|Name=KJC3_008944-T1|organism=Aspergillus niger KJC3|type=CDS|length=1923bp|location=Sequence derived from alignment at ch6:3532640..3534752+ (Aspergillus niger KJC3)
ATGTCGCTATACTCTCACCTGGGCGTGCTATCACGGCGGCGGGCATTGAG
GTCTTTGCATGTTTCACCATCGCTGTGCCGCCATGTCTCCATCGACGTCA
ACACCAGAGCTTCATATACCGAGCCCACTCCGTCCCACCTGGTCAGATTC
GCTCTGACGGGTACCACGAAACCCGCTCACAATGACGTCTCCAATCCGGA
GCTTGACAAGCACCTCTCGGACATATTTCTCGGTGATTGGCCCTTAGCGT
CTCTACCACCACCTTTTTGGAGCTCTTCTGGTCGACAGCCACGGAGCCCC
GATGAAATTGGGTCGTTCAAAGCCCTGAAACATGACGTACGAAACCTGCG
TCACTTGCAGGTATTCATTGAAAGAAGTGTCAATGAAGCAGAAGGCGGTC
TGCTTCTACAGACACAGTCCTGCGCCCTTTTAGCGCAAGCGCTAAATCGT
TGCCAGCGAAAGAATTCCTACGGCGAAATTCTCTCGGCGCTCAATGCTAT
CATTACAAGACTGGAGAAGCTGGGAGTACCACGTACGGATAATATATACT
TTTTGGGGATGTACTATGCTGCACTATCATTGTCCGTGCCGGCGCTTGAA
AGGTTTCTGGATGGATACCTTTCCGTTAGCCTGTGGCCTATGGACATCCT
AGCAAGCAAATCTCTAGTGAATGCGCTCCTCAATGCCCTTCACTATCTGA
GGTTCCGTGAGGTTAGTATTGATACGAACGCGATACTGGAAATAATCGAG
GGAGGTAAGCAACGCAGGAAGAAAAACCTACATGACCTTTTGTCCTGGGG
CGATTCTGCCGGTCCAACAACGCATCGTGGGCATTACCTTTGCCTACTCG
CGAGACTAAAGAGCGAAGACCTTCTGTCTGAAGTATGGAGGCAAACGATG
TGGAGACTTTCGCCGAACACTCCACCTGAAATGTACCAATGTATGTATAC
TTGTATAGTTACTCTGATGGAAAGTGGTGATGTTCTCCGAGCTACGGATT
ACTTGCAAGAAGTGTCGGAACGCTCCCAAGGAATTCTGCCTGGTATATCG
GAGTTCAAAGACGTCAACACACTGCTTGAGTCAGAAGTTCTTGGTCCCTT
GTTGCCTCGGATGGCAGGCGAGAAAGAGTACTTGAAGCTTCTTGAGGCTC
AACTAATACAGATCGAGAACAAGATGGGTCTCAGTTGGGATTCCGAAGGC
CTCTATCACACAAATATCAGTGATCCGCACTCAATAATCTCTGAGACACC
CCTCTTCAATATCGACGGTGACAGCACTGGCTATGAGAGCACTGCGCGCT
TAATTGCCGAAATCAAAGCCCTCGGATGCTCCAGGTCAGTGACAGATCTC
GGGAAGATTGCAGAAATGCTTGACGAACACGAGGGAGACGTGATCCCTGT
ATCTTTGCCCTCAACTAAAGGCCAGGATGTGGAGTACGCTTGGTTCCCCC
GGTATTCTTCATTTCGGCGTTCGGGGGCCTCTTCATCTGCTGAAAGAGAG
GGTACCGAGCCTTGGACACCTTCAACATTGGGTTTAGTTCGTGTCAGCTG
CAATAGCAGTGGATCCCCTCTCGAACGCTCCATTCATGTGATGCAGCTCG
GTCGTTTAGCAAGGAGAGCCAGGTGCCCACATGATCAGGATCCAACTTAT
GATACTCTTTGGGAAGAGACCGAGCATATGGTTACCTGGGATCGTGTCTA
TGGCCAATTCATCGCTGTATACGTTGGACCAAGCGACGGGCATATCGAGA
CTCGCATAGAGTCACGAGCTGCACGAGCGCGATCTGGTATTGAAGCGATC
ACCGCATTCTCTCTCCCTGGTGATACGGAACCAGTTTCACAGGGTGATCT
GATATCCTTTATTGGAAATGCGTCTATGCATTATTACATCGAGGAAGACC
CAAGCCCGGACCTGATATACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008944-T1.utr5p1 | KJC3_008944-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008944-T1.utr3p1 | KJC3_008944-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3532640..3534752 + |
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