You are here

Home

KJC3_008945-T1, KJC3_008945-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008945-T1
Unique NameKJC3_008945-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3540724..3542165+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008945-T1 ID=KJC3_008945-T1|Name=KJC3_008945-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1442bp|location=Sequence derived from alignment at ch6:3540724..3542165+ (Aspergillus niger KJC3)
GTATAAACCCCCCTTCTATTTCCATACAAGCAGCCCTAGTCTTATCTGCC
TGGAGTTATGATACCATGATCGTGGTCAAATGTGCATACTCCCGCTGTCT
CGCCTCGAGCTGTGGTGCTTCGTAACTCCCTTGATAACCATTATGCTAAT
GTGATTCGTACAGGTACAGTAGCAGCTCAGCAACCTTTCCAAGCCCCGTT
CACTCTGAAGAGAGCTCAGCAATGTATCCTGCGCTTGCACCACCCATAAA
ACCCCAGGTACAACAGCATCAGCGACACACCACGTCCAGCATGCCTTCTG
GGTTCGAAAGATTGCTTCACCACTCACCAACTCCGTCACCCCCGCCACGA
AGAACCTCCACAACATCACGCTATCACCTCTTCATCCGACAACAGCCCAT
CGCAGCCCGGGCTTGTGGTGCCGGTGACCGAGACCGCCGCCCTGTAGACC
CACCTCCAATCCTCCAGTTGCTGTTAACGGACTTTGACCCCAGCACATCA
GATGATATCAATGTCCTTCAAGATCCGCGCTTTACCGTTGGTTGCTTCTT
GGTTCCCGAAACGCGGGGTTCGATCTCGTCCGATCTGGATGGTGATAGTG
CACTTCGAGAGGACCGTCTCGGGACTGCTCCTGGTCAATCTACACCATTG
CTTTCGGGAAAAGCATTTGTCTCACCTTTCTTTGTCGATGAAGATCCAGA
CCCAGCAACTGCTCCTAATCATCCATCAACGTATGATTTTCACCTACCGG
AAAAAAGGATGCAGCTCGCCCCGTCATCATCCAACGGAGCCAAACAGCCC
GCAGCATTTTTCATATTCTCCGATCTCTCCGTGCGTACAGCTGGACTGTA
TCGCTTGCAATTCCGGCTCATGAACTGGGGCCTCGTTGAGGACACAGGAC
AATCGATGCCCGTCCTTGCCGAAGTATGGTCTGATCCTTTTCGCGTCTTC
CCTGCCAAAGACTTTCCCGGGATGCGAGACTCCTCACGTCTCACGGAAGG
TCTCAAGGAACTAGGTTTTGTCGAACTGAAAACCAGGGGAAAAGGAAAAG
GGAAGGGCCGACGGAGGTAACTTAGAAGCGAGACGGGATATGATACGGAT
GAATGAGTGAACGCAACGCTGGTCGGGAATCTTACGAATTGGTTTGATCT
GCTTCTCGTCTTTCTTTTCTTTTCTTTCCCTCCCCGCTCCGGCGTTCTCT
ACCTCTTCCTCCCTCTCTATTGCATATCGTGGTCATTTTTCTCTTCTATG
ACATCGTCGCATGATCCTGTCTGACGGAAATATGAATTTGGAGGAATATA
TATGATGCTATTACAAGGTTATATTGATATGATATGGAGTTTGGATCGGG
CACTCGAGTATAAGAGATGCAGGTGCCTACGCCGATGTTGATATTGATTA
TAGGAATCGACAGGAGACTATATATACCACCAGTCATAAGAG
back to top

Coding sequence (CDS) from alignment at ch6:3540724..3542165+

>KJC3_008945-T1 ID=KJC3_008945-T1|Name=KJC3_008945-T1|organism=Aspergillus niger KJC3|type=CDS|length=1818bp|location=Sequence derived from alignment at ch6:3540724..3542165+ (Aspergillus niger KJC3)
ATGTACAGTAGCAGCTCAGCAACCTTTCCAAGCCCCGTTCACTCTGAAGA
GAGCTCAGCAATGTATCCTGCGCTTGCACCACCCATAAAACCCCAGGTAC
AACAGCATCAGCGACACACCACGTCCAGCATGCCTTCTGGGTTCGAAAGA
TTGCTTCACCACTCACCAACTCCGTCACCCCCGCCACGAAGAACCTCCAC
AACATCACGCTATCACCTCTTCATCCGACAACAGCCCATCGCAGCCCGGG
CTTGTGGTGCCGGTGACCGAGACCGCCGCCCTGTAGACCCACCTCCAATC
CTCCAGTTGCTGTTAACGGACTTTGACCCCAGCACATCAGATGATATCAA
TGTCCTTCAAGATCCGCGCTTTACCGTTGGTTGCTTCTTGGTTCCCGAAA
CGCGGGGTTCGATCTCGTCCGATCTGGATGGTGATAGTGCACTTCGAGAG
GACCGTCTCGGGACTGCTCCTGGTCAATCTACACCATTGCTTTCGGGAAA
AGCATTTGTCTCACCTTTCTTTGTCGATGAAGATCCAGACCCAGCAACTG
CTCCTAATCATCCATCAACGTATGATTTTCACCTACCGGAAAAAAGGATG
CAGCTCGCCCCGTCATCATCCAACGGAGCCAAACAGCCCGCAGCATTTTT
CATATTCTCCGATCTCTCCGTGCGTACAGCTGGACTGTATCGCTTGCAAT
TCCGGCTCATGAACTGGGGCCTCGTTGAGGACACAGGACAATCGATGCCC
GTCCTTGCCGAAGTATGGTCTGATCCTTTTCGCGTCTTCCCTGCCAAAGA
CTTTCCCGGGATGCGAGACTCCTCACGTCTCACGGAAGGTCTCAAGGAAC
TAGGTTTTGTCGAACTGAAAACCAGGGGAAAAGGAAAAGGGAAGGGCCGA
CGGAGGTAAATGTACAGTAGCAGCTCAGCAACCTTTCCAAGCCCCGTTCA
CTCTGAAGAGAGCTCAGCAATGTATCCTGCGCTTGCACCACCCATAAAAC
CCCAGGTACAACAGCATCAGCGACACACCACGTCCAGCATGCCTTCTGGG
TTCGAAAGATTGCTTCACCACTCACCAACTCCGTCACCCCCGCCACGAAG
AACCTCCACAACATCACGCTATCACCTCTTCATCCGACAACAGCCCATCG
CAGCCCGGGCTTGTGGTGCCGGTGACCGAGACCGCCGCCCTGTAGACCCA
CCTCCAATCCTCCAGTTGCTGTTAACGGACTTTGACCCCAGCACATCAGA
TGATATCAATGTCCTTCAAGATCCGCGCTTTACCGTTGGTTGCTTCTTGG
TTCCCGAAACGCGGGGTTCGATCTCGTCCGATCTGGATGGTGATAGTGCA
CTTCGAGAGGACCGTCTCGGGACTGCTCCTGGTCAATCTACACCATTGCT
TTCGGGAAAAGCATTTGTCTCACCTTTCTTTGTCGATGAAGATCCAGACC
CAGCAACTGCTCCTAATCATCCATCAACGTATGATTTTCACCTACCGGAA
AAAAGGATGCAGCTCGCCCCGTCATCATCCAACGGAGCCAAACAGCCCGC
AGCATTTTTCATATTCTCCGATCTCTCCGTGCGTACAGCTGGACTGTATC
GCTTGCAATTCCGGCTCATGAACTGGGGCCTCGTTGAGGACACAGGACAA
TCGATGCCCGTCCTTGCCGAAGTATGGTCTGATCCTTTTCGCGTCTTCCC
TGCCAAAGACTTTCCCGGGATGCGAGACTCCTCACGTCTCACGGAAGGTC
TCAAGGAACTAGGTTTTGTCGAACTGAAAACCAGGGGAAAAGGAAAAGGG
AAGGGCCGACGGAGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008945KJC3_008945Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008945-T1.utr5p1KJC3_008945-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008945-T1.exon1KJC3_008945-T1.exon1Aspergillus niger KJC3exon
KJC3_008945-T1.exon2KJC3_008945-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008945-T1.cdsKJC3_008945-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008945-T1.utr3p1KJC3_008945-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008945-T1KJC3_008945-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037525
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3540724..3542165 +
Powered by Drupal