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KJC3_008946-T1, KJC3_008946-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008946-T1
Unique NameKJC3_008946-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3543010..3544188-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008946-T1 ID=KJC3_008946-T1|Name=KJC3_008946-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1179bp|location=Sequence derived from alignment at ch6:3543010..3544188- (Aspergillus niger KJC3)
ATTCGATATCTCGAGCAGCTTCAATCCCTTGGTCACCCTCCCCCACGGTC
CTACGTCTCTCCCTGTTCCCGTTCCGTTCGTCCTCACCTTCCGTCCATCA
TGTCCGTTTCCGCCCAGGCCGCAGCTCGCTGCTGCAGACAGATCGTCCGC
CCTACCGCTTCTCTGCGCCTTGCTCCCACGACATACCTGTCCCAGCGCAC
ACTCAGCCGGAGATGGCAATCCACTGAGGCGGAGGCTGCTGCTGCTCCTG
CCAACCCCAAGATCACCCAGATTGTCGACCAGATCAGCCAATTGACCCTG
CTTGAGACCGCCGACCTTGTGTCCACCCTGAAGGTGCGTTGTTTTGCATC
CCCGGATCTGTGTCGCAAACTCCGCACCGTGCCCGTTTTGGGCTGTATTC
CATCCATTGTGGTGGATTGATGCTTGTCGAATCACATTGAGCTCGATACT
GACTTGCACATTGTCATCTTAGACCCGCCTGAACATCCCCGACCTGCCCG
TTGGCGGTTTCGCCGTGGGCGCTGCTCCCGCCGCTCCCGCCGCTGCTGAG
GAAGAGGAGGCTGCTCCCGCCCAGCAGGAGAAGACCCTTTTCAACCTGAA
GCTCGAGTCCGTTGACGCCTCCTCCAAGGCCAAGGTCATCAAGGAGATCA
AGACCCTCCTCGGCCTGTCCCTGGTCGACAGCAAGAAGTTCGTCGAGTCC
GTTCCCAAGGTCCTGAAGGAGTCTGTGCCCAAGGAGGAGGCCGAGAAGAT
CGTGGAGACCCTCAAGGCCGTGGGCGCCAAGGCCACTATGGACTAAACTG
GGACTTCTATACTACTCTCTGCTTTCGGGGACTTTTTTTAATGCTACCGG
GTCACCCTAAGCTTTCATCTTCCCACCTCCTCCTTCGTTCTAAGCGGATG
AGCGAAGGGGGAAAGGGAAGAGGGAGAGGCTACCTGGATGGTCTGGACGT
TGTGATTGGACTGCATCTCATCATGCTGGAGTTTTGTCTCGCACCACCCT
TTTTCTTATTCCGTCATGTATTGTGTGTGTGTGTGTGTGTGTGTGTGTTT
TTATCCTATCTCTTTTCTTTTCTCCGTCATATATCTCTTAAGACTGTTCT
GATATAAACCGGAAAGCGGGAAAAAGGCGGCGAGTGTACATTATTATCGC
ATTGAATGGACAATGTTGAAACAAGCTGG
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Coding sequence (CDS) from alignment at ch6:3543010..3544188-

>KJC3_008946-T1 ID=KJC3_008946-T1|Name=KJC3_008946-T1|organism=Aspergillus niger KJC3|type=CDS|length=1116bp|location=Sequence derived from alignment at ch6:3543010..3544188- (Aspergillus niger KJC3)
ACCCGCCTGAACATCCCCGACCTGCCCGTTGGCGGTTTCGCCGTGGGCGC
TGCTCCCGCCGCTCCCGCCGCTGCTGAGGAAGAGGAGGCTGCTCCCGCCC
AGCAGGAGAAGACCCTTTTCAACCTGAAGCTCGAGTCCGTTGACGCCTCC
TCCAAGGCCAAGGTCATCAAGGAGATCAAGACCCTCCTCGGCCTGTCCCT
GGTCGACAGCAAGAAGTTCGTCGAGTCCGTTCCCAAGGTCCTGAAGGAGT
CTGTGCCCAAGGAGGAGGCCGAGAAGATCGTGGAGACCCTCAAGGCCGTG
GGCGCCAAGGCCACTATGGACTAAATGTCCGTTTCCGCCCAGGCCGCAGC
TCGCTGCTGCAGACAGATCGTCCGCCCTACCGCTTCTCTGCGCCTTGCTC
CCACGACATACCTGTCCCAGCGCACACTCAGCCGGAGATGGCAATCCACT
GAGGCGGAGGCTGCTGCTGCTCCTGCCAACCCCAAGATCACCCAGATTGT
CGACCAGATCAGCCAATTGACCCTGCTTGAGACCGCCGACCTTGTGTCCA
CCCTGAAGACCCGCCTGAACATCCCCGACCTGCCCGTTGGCGGTTTCGCC
GTGGGCGCTGCTCCCGCCGCTCCCGCCGCTGCTGAGGAAGAGGAGGCTGC
TCCCGCCCAGCAGGAGAAGACCCTTTTCAACCTGAAGCTCGAGTCCGTTG
ACGCCTCCTCCAAGGCCAAGGTCATCAAGGAGATCAAGACCCTCCTCGGC
CTGTCCCTGGTCGACAGCAAGAAGTTCGTCGAGTCCGTTCCCAAGGTCCT
GAAGGAGTCTGTGCCCAAGGAGGAGGCCGAGAAGATCGTGGAGACCCTCA
AGGCCGTGGGCGCCAAGGCCACTATGGACTAAATGTCCGTTTCCGCCCAG
GCCGCAGCTCGCTGCTGCAGACAGATCGTCCGCCCTACCGCTTCTCTGCG
CCTTGCTCCCACGACATACCTGTCCCAGCGCACACTCAGCCGGAGATGGC
AATCCACTGAGGCGGAGGCTGCTGCTGCTCCTGCCAACCCCAAGATCACC
CAGATTGTCGACCAGATCAGCCAATTGACCCTGCTTGAGACCGCCGACCT
TGTGTCCACCCTGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008946KJC3_008946Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008946-T1KJC3_008946-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008946-T1.cdsKJC3_008946-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008946-T1.utr3p1KJC3_008946-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008946-T1.exon2KJC3_008946-T1.exon2Aspergillus niger KJC3exon
KJC3_008946-T1.exon1KJC3_008946-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008946-T1.utr5p1KJC3_008946-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265HPJ
DBxrefInterPro:IPR036235
DBxrefInterPro:IPR000206
DBxrefInterPro:IPR008932
DBxrefInterPro:IPR013823
DBxrefInterPro:IPR014719
DBxrefPFAM:PF16320
DBxrefPFAM:PF00542
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3543010..3544188 -
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