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KJC3_008950-T1, KJC3_008950-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008950-T1
Unique NameKJC3_008950-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3550683..3552398-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008950-T1 ID=KJC3_008950-T1|Name=KJC3_008950-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1716bp|location=Sequence derived from alignment at ch6:3550683..3552398- (Aspergillus niger KJC3)
CTTCTTCTATCACTTACATCTCTAATCATTTATACCTTCTTTTACAATCA
CTACTACTCACCTACCCACCTACAACCCCATAGCCTCATGTCCAACCGCG
TCCTGATAGCCGGCGGCGGCCTCGGCGGCCTCGCCCTAGCCCAAGGTCTC
CGCAAGCACAACATCCCCTTCAGCGTCTTCGAACGAGACGCAAAGCAAGA
CTTTCGCGCCCAAGGCTACAGACTACGCGTGATGCAAGAAAATCTCCGCA
CCCTCCTCACCCCCGAAATGTGGTCCCTATTCGAGAAAACTGCTGCCCTG
GATGACGGTCTCCCAGGTGTCGGAGTCCGACTCGACGCACTGACCGGAGA
ACCCCTCCCCGCTGGTGGTGGTGGTGGTCCGCCGCCCGGGATCCACGGAG
CCAGACCGTACACTGTGGACCGGGGGACGATGCGCGAGGTCCTTCTGCAG
CGTCTTGGGGAGGAGAATGTGCATTTCGGGAAGCGGTTCGAGCGGTATGA
GGTGAAGGATGATTGTGTAGTCGCGCATTTCGCGGATGGTAGTTCCGCGG
TTGGAGGGTTGCTTGTTGGTGCGGATGGAGCGAGGTCGCGGGTTAGGAGG
CAGTTGGTGCCGTGGTATCCATTTGTGGATACGGGGATGAGAATGATCTT
TGGGAAGACGGGGATCACGGAGGATGTGGAGGGGAGGTTGAATGAATGCG
CCAGGAGGGGGATGTCGCTTGCGAGGGATTTGAGGGAGGAGGCGCCGAAG
ACGTTGTTGTTTGAGCCGATGAGGATGCCGAAGGGTGACGTTGAATTTGA
GAGAGGAAGCGTTAAGGTGCCGGAGGATTATCTGTATTGGGTGTTGCTTG
TTCATCGGTCTTTTGTGAATATGCCGGATGAGAAGGTTCTCAGGTTGGAT
GGGGAGGAGTCGGCTCGGTTGTCGCTTGAGTTGACGAGTGATTGGCATCC
CTCTGTGAGGGTATTGCTGGAGGAGCAGGATGTCGAGCAGACTTCAACGC
TGAGGATGGCGTCTGTTAGGCCGGATTTGCCGGCTTGGGAGAGTAATTCG
AGGGTCACCCTTCTTGGGGATGCGGTTCATGTTATGCCGCCCACTGGTGG
GCAGGGGGTAAATACGGCGTTGAGGGATGCGGCGGTGCTGGTTGAGAGGA
TGGTGGAGGCAAAGGAGGGTGGGAGTGAAACGGTGGGTGGAGGGGATGTC
GTCGCGAGGTATGAGGAGGAGATGAGGCAGTATGCGCGGGAAAGGGTCGG
GTTGAGTTGGCAGGGCGGGTATAAGGCGTTTAATCTGAGGCCGCTGGAGG
AGTGTGAGAGCGTTGAGTTGTCGTAGTCTGGATCTTGCTTGAACAGGTGT
TCTTGATGATCTTGTTGGGGTTGCGCGGAGGATAGAGGCCAGCTTGCTGG
GTGTTTGTTATCCTGTGATGATGCCGCAAGGTGAGGATGGAACTAACGTG
AGGGTGCGTGCGTGGTAACTAAAGACTGTGTGTGGCCTTGACCGCTGTAA
GGCCTTACCTCCGCTAACCAACCAAGTTTGGTAGTGCTTTTCTACGGAGT
ACCCACATCCAGTATAACAAAGTATAGTACAGGTTCGAATCCCGCGGCCA
CCAACCTCGGAGGTTACCATATCGGAAGTTTCTCTATACATGCGCAGTAT
TATAAGAGAAACTTATAACAAGTCCACAGAGCATACTTCTGATTCATAGT
CCTCCCTCTTTCTGTC
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Coding sequence (CDS) from alignment at ch6:3550683..3552398-

>KJC3_008950-T1 ID=KJC3_008950-T1|Name=KJC3_008950-T1|organism=Aspergillus niger KJC3|type=CDS|length=1239bp|location=Sequence derived from alignment at ch6:3550683..3552398- (Aspergillus niger KJC3)
ATGTCCAACCGCGTCCTGATAGCCGGCGGCGGCCTCGGCGGCCTCGCCCT
AGCCCAAGGTCTCCGCAAGCACAACATCCCCTTCAGCGTCTTCGAACGAG
ACGCAAAGCAAGACTTTCGCGCCCAAGGCTACAGACTACGCGTGATGCAA
GAAAATCTCCGCACCCTCCTCACCCCCGAAATGTGGTCCCTATTCGAGAA
AACTGCTGCCCTGGATGACGGTCTCCCAGGTGTCGGAGTCCGACTCGACG
CACTGACCGGAGAACCCCTCCCCGCTGGTGGTGGTGGTGGTCCGCCGCCC
GGGATCCACGGAGCCAGACCGTACACTGTGGACCGGGGGACGATGCGCGA
GGTCCTTCTGCAGCGTCTTGGGGAGGAGAATGTGCATTTCGGGAAGCGGT
TCGAGCGGTATGAGGTGAAGGATGATTGTGTAGTCGCGCATTTCGCGGAT
GGTAGTTCCGCGGTTGGAGGGTTGCTTGTTGGTGCGGATGGAGCGAGGTC
GCGGGTTAGGAGGCAGTTGGTGCCGTGGTATCCATTTGTGGATACGGGGA
TGAGAATGATCTTTGGGAAGACGGGGATCACGGAGGATGTGGAGGGGAGG
TTGAATGAATGCGCCAGGAGGGGGATGTCGCTTGCGAGGGATTTGAGGGA
GGAGGCGCCGAAGACGTTGTTGTTTGAGCCGATGAGGATGCCGAAGGGTG
ACGTTGAATTTGAGAGAGGAAGCGTTAAGGTGCCGGAGGATTATCTGTAT
TGGGTGTTGCTTGTTCATCGGTCTTTTGTGAATATGCCGGATGAGAAGGT
TCTCAGGTTGGATGGGGAGGAGTCGGCTCGGTTGTCGCTTGAGTTGACGA
GTGATTGGCATCCCTCTGTGAGGGTATTGCTGGAGGAGCAGGATGTCGAG
CAGACTTCAACGCTGAGGATGGCGTCTGTTAGGCCGGATTTGCCGGCTTG
GGAGAGTAATTCGAGGGTCACCCTTCTTGGGGATGCGGTTCATGTTATGC
CGCCCACTGGTGGGCAGGGGGTAAATACGGCGTTGAGGGATGCGGCGGTG
CTGGTTGAGAGGATGGTGGAGGCAAAGGAGGGTGGGAGTGAAACGGTGGG
TGGAGGGGATGTCGTCGCGAGGTATGAGGAGGAGATGAGGCAGTATGCGC
GGGAAAGGGTCGGGTTGAGTTGGCAGGGCGGGTATAAGGCGTTTAATCTG
AGGCCGCTGGAGGAGTGTGAGAGCGTTGAGTTGTCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008950KJC3_008950Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008950-T1.cdsKJC3_008950-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008950-T1.utr3p1KJC3_008950-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008950-T1.exon1KJC3_008950-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008950-T1.utr5p1KJC3_008950-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008950-T1KJC3_008950-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002938
DBxrefInterPro:IPR036188
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3550683..3552398 -
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