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KJC3_008987-T1, KJC3_008987-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008987-T1
Unique NameKJC3_008987-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3807459..3809100+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008987-T1 ID=KJC3_008987-T1|Name=KJC3_008987-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1642bp|location=Sequence derived from alignment at ch6:3807459..3809100+ (Aspergillus niger KJC3)
CCGGGGCCATAGTTACTGGTCTGGCAATTCCCATCCGCCACCACCTTCCT
GTTCCTATCTTGCCATCTGTCGCCAAAGGTGCTCATTGGGGCAACGCAAG
AGCTAAGCGGCGCAACACAAATGACACTCATTATATTTGTTTTTGGCCTG
TCTGGATTAGTTCCCTGGTACAATAAGTAACAAACACGTGTGAAGGCTAA
CACTGAGGGATCCTCGTCTTAGGCTTCTCGGCAGGATTATATGTATCGAT
GATGTGACAAACCCCCCTCTCAACAACTACATTCCTTCTCAAGCTTATAC
CTGGGAACGCACTCCTTCGTATGCTCCTACTCCTGGTAATTTCGACCGAG
AACGGACGCCTTCTATATATAGTTTATGCCCCTCTTGTGAACGTTCCCCG
CCACTAGTTCCACAGTCCAACCAACAACGGGCCTTCGATAGTGTTGAACC
AAGAAATGGACCAGCCGACTTTGAAGGGCCCTGCTATATGCCGTATGTAA
TCGAGTGGAGAGTGACTCTCAATAACAGAGTCTTGACAAAAGATACGGAA
CAAGACCTGGATTCAACACCTGGTTCATATTGGCAAGAAATTAAGCAAAA
GGCGGAACGTGTGTTGCTCCAGAAAATAGACCGTGATCGCCGGGTGAGGC
TTGATGATACTGTGGTTGTGGTTTCCGTAAATGAACGCTCGCAGCGCGAT
CTTACAAAGCGCTTTGAAAAGGCTGATATCGATTGGACAGCTATAAATAA
GCAAATCCTCATGTGGCAAGATCTCCTTCATCGCCCCAAGAAAATGCTTA
CGGTCTCCATCTCTATCAATTATAGGGAGGACAACTCTTCGTCCAGGGGG
ACAGACAAAAGAGGAACCTCCTCAGTAACTAACAGAATGCTTCGGCAACG
GGACGACCAGATCGATGCTGAGGAATGCTCCGGGCAACCGTCAGTTTGGC
GAGATGTATATCGGAAAATGCGATGCCCAGGGCCTCCTTGCCAGCATGAG
GGCCAGTACTGCTGGCAGGATCCAGCGGGTAAAAAGCATTACAGACTCAG
GACACACCACCTAAAAAGCCTTGTCAAATATGTTGAACAAGGTGGTATCT
TAGAGACCCATGATGATGTTCCCGACAATGTGCGGGAACAGCTGTATGCA
GAAGATCGTCAACGCCTTTCGAAACAAAACCAGACCTCCAGCAATCTCAT
GTCAGGCTCGGCGCTTCCGCAGATAAATATTAATGTCCATCCATCTCAGT
TGGCACAACCCTCGATCTCTTCAGTGCCGGACACTGAAGAGGCTCCACCC
ACTGTTCAGGATGAGATCAGCGACATTCCTGGACCTCTTGAGGGAGCTGT
GGAGGAATACGTTGATTGGCATCTTTCGCGCGTGGGCACGGAAAGTTACA
AAGAAAACATTAAGATGGCGCGTGATATAGCGTTAGAGAATTGTTTTGAT
ATTGCTCAAATCCGTGGGGAAAGCCCGGAATTTTTTGTTAAACAGGGAGT
GGCAATCGGTGCGGCTCGCAGGTTCGTTGGCCATACTAGGCTTTGGCTCA
AGTGGAGGGCCCAAGGCAATACTCAATGTACATAATAATTTGGCACAGTC
ACCATGGTCATATTCGTTGCATTCGGGGCACGATTGTGCGTC
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Coding sequence (CDS) from alignment at ch6:3807459..3809100+

>KJC3_008987-T1 ID=KJC3_008987-T1|Name=KJC3_008987-T1|organism=Aspergillus niger KJC3|type=CDS|length=2784bp|location=Sequence derived from alignment at ch6:3807459..3809100+ (Aspergillus niger KJC3)
ATGACACTCATTATATTTGTTTTTGGCCTGCTTCTCGGCAGGATTATATG
TATCGATGATGTGACAAACCCCCCTCTCAACAACTACATTCCTTCTCAAG
CTTATACCTGGGAACGCACTCCTTCGTATGCTCCTACTCCTGGTAATTTC
GACCGAGAACGGACGCCTTCTATATATAGTTTATGCCCCTCTTGTGAACG
TTCCCCGCCACTAGTTCCACAGTCCAACCAACAACGGGCCTTCGATAGTG
TTGAACCAAGAAATGGACCAGCCGACTTTGAAGGGCCCTGCTATATGCCG
TATGTAATCGAGTGGAGAGTGACTCTCAATAACAGAGTCTTGACAAAAGA
TACGGAACAAGACCTGGATTCAACACCTGGTTCATATTGGCAAGAAATTA
AGCAAAAGGCGGAACGTGTGTTGCTCCAGAAAATAGACCGTGATCGCCGG
GTGAGGCTTGATGATACTGTGGTTGTGGTTTCCGTAAATGAACGCTCGCA
GCGCGATCTTACAAAGCGCTTTGAAAAGGCTGATATCGATTGGACAGCTA
TAAATAAGCAAATCCTCATGTGGCAAGATCTCCTTCATCGCCCCAAGAAA
ATGCTTACGGTCTCCATCTCTATCAATTATAGGGAGGACAACTCTTCGTC
CAGGGGGACAGACAAAAGAGGAACCTCCTCAGTAACTAACAGAATGCTTC
GGCAACGGGACGACCAGATCGATGCTGAGGAATGCTCCGGGCAACCGTCA
GTTTGGCGAGATGTATATCGGAAAATGCGATGCCCAGGGCCTCCTTGCCA
GCATGAGGGCCAGTACTGCTGGCAGGATCCAGCGGGTAAAAAGCATTACA
GACTCAGGACACACCACCTAAAAAGCCTTGTCAAATATGTTGAACAAGGT
GGTATCTTAGAGACCCATGATGATGTTCCCGACAATGTGCGGGAACAGCT
GTATGCAGAAGATCGTCAACGCCTTTCGAAACAAAACCAGACCTCCAGCA
ATCTCATGTCAGGCTCGGCGCTTCCGCAGATAAATATTAATGTCCATCCA
TCTCAGTTGGCACAACCCTCGATCTCTTCAGTGCCGGACACTGAAGAGGC
TCCACCCACTGTTCAGGATGAGATCAGCGACATTCCTGGACCTCTTGAGG
GAGCTGTGGAGGAATACGTTGATTGGCATCTTTCGCGCGTGGGCACGGAA
AGTTACAAAGAAAACATTAAGATGGCGCGTGATATAGCGTTAGAGAATTG
TTTTGATATTGCTCAAATCCGTGGGGAAAGCCCGGAATTTTTTGTTAAAC
AGGGAGTGGCAATCGGTGCGGCTCGCAGGTTCGTTGGCCATACTAGGCTT
TGGCTCAAGTGGAGGGCCCAAGGCAATACTCAATGTACATAAATGACACT
CATTATATTTGTTTTTGGCCTGCTTCTCGGCAGGATTATATGTATCGATG
ATGTGACAAACCCCCCTCTCAACAACTACATTCCTTCTCAAGCTTATACC
TGGGAACGCACTCCTTCGTATGCTCCTACTCCTGGTAATTTCGACCGAGA
ACGGACGCCTTCTATATATAGTTTATGCCCCTCTTGTGAACGTTCCCCGC
CACTAGTTCCACAGTCCAACCAACAACGGGCCTTCGATAGTGTTGAACCA
AGAAATGGACCAGCCGACTTTGAAGGGCCCTGCTATATGCCGTATGTAAT
CGAGTGGAGAGTGACTCTCAATAACAGAGTCTTGACAAAAGATACGGAAC
AAGACCTGGATTCAACACCTGGTTCATATTGGCAAGAAATTAAGCAAAAG
GCGGAACGTGTGTTGCTCCAGAAAATAGACCGTGATCGCCGGGTGAGGCT
TGATGATACTGTGGTTGTGGTTTCCGTAAATGAACGCTCGCAGCGCGATC
TTACAAAGCGCTTTGAAAAGGCTGATATCGATTGGACAGCTATAAATAAG
CAAATCCTCATGTGGCAAGATCTCCTTCATCGCCCCAAGAAAATGCTTAC
GGTCTCCATCTCTATCAATTATAGGGAGGACAACTCTTCGTCCAGGGGGA
CAGACAAAAGAGGAACCTCCTCAGTAACTAACAGAATGCTTCGGCAACGG
GACGACCAGATCGATGCTGAGGAATGCTCCGGGCAACCGTCAGTTTGGCG
AGATGTATATCGGAAAATGCGATGCCCAGGGCCTCCTTGCCAGCATGAGG
GCCAGTACTGCTGGCAGGATCCAGCGGGTAAAAAGCATTACAGACTCAGG
ACACACCACCTAAAAAGCCTTGTCAAATATGTTGAACAAGGTGGTATCTT
AGAGACCCATGATGATGTTCCCGACAATGTGCGGGAACAGCTGTATGCAG
AAGATCGTCAACGCCTTTCGAAACAAAACCAGACCTCCAGCAATCTCATG
TCAGGCTCGGCGCTTCCGCAGATAAATATTAATGTCCATCCATCTCAGTT
GGCACAACCCTCGATCTCTTCAGTGCCGGACACTGAAGAGGCTCCACCCA
CTGTTCAGGATGAGATCAGCGACATTCCTGGACCTCTTGAGGGAGCTGTG
GAGGAATACGTTGATTGGCATCTTTCGCGCGTGGGCACGGAAAGTTACAA
AGAAAACATTAAGATGGCGCGTGATATAGCGTTAGAGAATTGTTTTGATA
TTGCTCAAATCCGTGGGGAAAGCCCGGAATTTTTTGTTAAACAGGGAGTG
GCAATCGGTGCGGCTCGCAGGTTCGTTGGCCATACTAGGCTTTGGCTCAA
GTGGAGGGCCCAAGGCAATACTCAATGTACATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008987KJC3_008987Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008987-T1.utr5p1KJC3_008987-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008987-T1.exon1KJC3_008987-T1.exon1Aspergillus niger KJC3exon
KJC3_008987-T1.exon2KJC3_008987-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008987-T1.cdsKJC3_008987-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008987-T1.utr3p1KJC3_008987-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008987-T1KJC3_008987-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3807459..3809100 +
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