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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3809115..3811806+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008988-T1 ID=KJC3_008988-T1|Name=KJC3_008988-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2692bp|location=Sequence derived from alignment at ch6:3809115..3811806+ (Aspergillus niger KJC3)
CTAGGCTACGAGACCAATTATGAATGGTCCTCGGATATCGGTCTGATAAT
TATCCGTCGACTTTGGAATTTATCACGTGATTGATTCCTTCCAGGCCTTG
AAACTCGAAACCCGAAACCTTGAATATCATTCCCCAACTTATGTCCAATG
CACTTCTGAGAAGATGCCGTCGGGGCACACCCGCCACCAAGTCTCTCTGG
AGGCTGTTTTGGATTTCTCACAGCCGTTCACTCTACCACCAGATCAAAGT
CGGACAGCAACCATTGTTTTTCATCAACTCATCAATCACTACAATACCGA
GCAGGTTGCACGCAAAGGGTACAGGCCTGCTGCGCTTGCCCAGGCTGTCT
TTGATCACGTTTCATCAAAAGACGCATTTCTAGTTCTCTTCCTTTCATTT
GTACATGATAGATTATGCTCGCAATCAAACAATGCGCAAAGCTCTGATCT
CACTCCTTGCCTGCTCTATTTCGATGGTTTCGACTCATGGGATTTAGAGA
AGTTGAAGAGCACCAAGGACGCAATTGAAAACTTTGCTGAGTATATCATT
GAAAATCTGCTCCTTCCACGTACAGTACCATGCCCGCCATCTGGAATCTG
AGATTACTATGAAACAGTACTAACCGAGTTTATATTGTTAGTCAGAGCTT
CATCAGTCAAAACTCCACAGCCCACGCCTGCATCACTGTCTTCCTTACAA
GCGGCCGCGACAGCCAATTCAGCACAACGTTTATCTACTTTAAGACAGAG
TTGCCTTATACGAGATCATCATCGGTGCGTGATTTCTCGGAAGTTCGATC
GACGCGAAGCCGAAAGGCGTCTCCAGCAAAACGGGGAAGACTGCAAAGAT
GATGATGGAAACCTTCTTCGAAATGAGTCCAGTGACCGGTTCCAATTTCT
AGAAGTTGCTCACATCCTACCTCACTCTCTAACGGCCGTCGCTTCGGAAA
ACGCGGAACTGGTAGGAAAGCTCCGAGTTTTCGTCATCATTTCATTAACG
AGGTATCATAGAGTGATTCGAAGAAAAATGCTCTCCAGATTCTGAATATG
TTCGACCACGGAATAACCCATCTTATTGAATACCCCAAGATTGATAGTCC
CCTAAATGCTTTGACACTAACACATGACTACCATCAACTATTCGGCGCAT
TCAAAATATATTTCGAGCACACAGGCGCCCCATATCAATATGAGATCAAG
TCGACACAGCAAAGTTCATTTTTAAGCGATCCCTTATTACCCGTCGTTCG
CACGCTGACACTTAGCCCCAACCGTACCATCGACCCGCCATCTCATCGGC
TCCTCGCTGTTCACCGTGCCATCGCGTGCATTATAAAAATCAGTGGTGCG
GGGGATTACATGGAGAGTGTTCTTCGTGATATAGAGGAAGTAACTGTAAA
AGCAGACGGCTCAACAAACTTAGGACTCATCATGAATCTTCGGCTTAGTG
GCTGGTTAGATACATTGGCTGCCTGCTAGGTCTTGTGTTACATTCTTGTT
GATTGCATTCCTGTTGGACTCCCCCGAGTCGGGTGGACCCCAGTCTTCAG
CTATGACGCTGAAATTTATACGATACTGAGATTGACTATATCGTAATTTG
TGTTAGAAGGCCGCCGAAGAGTCAATGTTTGATTTATCACTCGTTACCTA
CTGTATGCGGTCTACACTTCGTCAAGTGTCAGGCCGGCATTTCGAAAATG
CCCTTCTGCACTTGATTTCCTCGTGCCCACGGTATTAACGCACCAGTCAA
GAAAGGAGGCGAATCCCTGCTCAGGATTGTCTTCGTAAGTTTGCCAATGC
CGTCTTATGAACGCCTTTAGCTCTGAGAAGAACTCTTCGATTGGATTCAA
ATCCGGGGAATATGGGGGCAGATATACGATCTTGACACCTGCTTGTGAGC
ACATTTCTTCGACTTTCTCCGAGTGATGAAACGATGCATTATCCATTACA
ATCACTGATTTCGGTTCTGGCCATCTTCCACAGTGTTGAAGTAGTTCCTC
AATAAAATCCTCAAACACAGAGGCGTCTGTAGACCCCTGAAAAATGCGGG
AAAAAATAATTCCATCTTGAGAATATGCCGGAAGGATTTGATACCGCTGA
TCGCGGTGGAACCTGGCTACTTGTATAGGTGCTAAGCCAAGAGGAGACCA
GCCTGTCCTTCTGAAGCCTATTCTCCTATCACATCCGGATTCGTCGACAA
ACAAAAGATGGCGAGGGGAGAAATCCGATATGTAGTGAACATAGGCGTCG
CGCAACTCCGCATTACGCTCTATAGCCTTTTGCTTAGCAGTCTTCTTAGA
CCAGCCTTCGCGTTTGAGAGCACGACTGATGCTGCACGTTGTTACTTGTA
CCTGAAACTCGTCCCACAGAAATATGGCCATTTCATCAAGGTATAAGTAA
GGCTTTTCCAAGAGATGATCACACAGAGCTTTGACCATCTCTGGTGTGAG
ACGGCGTGGACGCCCACGCTTAATGGGAGGGGCCTTCACACTCCCAAATA
TGTTCAGATTGTTGATATGTCTAGTGACAGTACTTGGGTTACAGCCCGCC
GTATCTGCGATTTGTGAAGGGGTGAGTTCATTGCTCAAGATCATATCACG
GATGAACTCTAGAGTCGATGGAGCTAGATTGGGAGCCATTTGTGACGTGG
AGGATGATCGACGTGATCTCCTGGATGGTTCCTGGATGGATT back to topCoding sequence (CDS) from alignment at ch6:3809115..3811806+ >KJC3_008988-T1 ID=KJC3_008988-T1|Name=KJC3_008988-T1|organism=Aspergillus niger KJC3|type=CDS|length=5136bp|location=Sequence derived from alignment at ch6:3809115..3811806+ (Aspergillus niger KJC3)
ATGAATGGTCCTCGGATATCGGCCTTGAAACTCGAAACCCGAAACCTTGA
ATATCATTCCCCAACTTATGTCCAATGCACTTCTGAGAAGATGCCGTCGG
GGCACACCCGCCACCAAGTCTCTCTGGAGGCTGTTTTGGATTTCTCACAG
CCGTTCACTCTACCACCAGATCAAAGTCGGACAGCAACCATTGTTTTTCA
TCAACTCATCAATCACTACAATACCGAGCAGGTTGCACGCAAAGGGTACA
GGCCTGCTGCGCTTGCCCAGGCTGTCTTTGATCACGTTTCATCAAAAGAC
GCATTTCTAGTTCTCTTCCTTTCATTTGTACATGATAGATTATGCTCGCA
ATCAAACAATGCGCAAAGCTCTGATCTCACTCCTTGCCTGCTCTATTTCG
ATGGTTTCGACTCATGGGATTTAGAGAAGTTGAAGAGCACCAAGGACGCA
ATTGAAAACTTTGCTGAGTATATCATTGAAAATCTGCTCCTTCCACTCAG
AGCTTCATCAGTCAAAACTCCACAGCCCACGCCTGCATCACTGTCTTCCT
TACAAGCGGCCGCGACAGCCAATTCAGCACAACGTTTATCTACTTTAAGA
CAGAGTTGCCTTATACGAGATCATCATCGGTGCGTGATTTCTCGGAAGTT
CGATCGACGCGAAGCCGAAAGGCGTCTCCAGCAAAACGGGGAAGACTGCA
AAGATGATGATGGAAACCTTCTTCGAAATGAGTCCAGTGACCGGTTCCAA
TTTCTAGAAGTTGCTCACATCCTACCTCACTCTCTAACGGCCGTCGCTTC
GGAAAACGCGGAACTGAGTGATTCGAAGAAAAATGCTCTCCAGATTCTGA
ATATGTTCGACCACGGAATAACCCATCTTATTGAATACCCCAAGATTGAT
AGTCCCCTAAATGCTTTGACACTAACACATGACTACCATCAACTATTCGG
CGCATTCAAAATATATTTCGAGCACACAGGCGCCCCATATCAATATGAGA
TCAAGTCGACACAGCAAAGTTCATTTTTAAGCGATCCCTTATTACCCGTC
GTTCGCACGCTGACACTTAGCCCCAACCGTACCATCGACCCGCCATCTCA
TCGGCTCCTCGCTGTTCACCGTGCCATCGCGTGCATTATAAAAATCAGTG
GTGCGGGGGATTACATGGAGAGTGTTCTTCGTGATATAGAGGAAGTAACT
GTAAAAGCAGACGGCTCAACAAACTTAGGACTCATCATGAATCTTCGGCT
TAGTGGCTGGTTAGATACATTGGCTGCCTGCTAGATGAATGGTCCTCGGA
TATCGGCCTTGAAACTCGAAACCCGAAACCTTGAATATCATTCCCCAACT
TATGTCCAATGCACTTCTGAGAAGATGCCGTCGGGGCACACCCGCCACCA
AGTCTCTCTGGAGGCTGTTTTGGATTTCTCACAGCCGTTCACTCTACCAC
CAGATCAAAGTCGGACAGCAACCATTGTTTTTCATCAACTCATCAATCAC
TACAATACCGAGCAGGTTGCACGCAAAGGGTACAGGCCTGCTGCGCTTGC
CCAGGCTGTCTTTGATCACGTTTCATCAAAAGACGCATTTCTAGTTCTCT
TCCTTTCATTTGTACATGATAGATTATGCTCGCAATCAAACAATGCGCAA
AGCTCTGATCTCACTCCTTGCCTGCTCTATTTCGATGGTTTCGACTCATG
GGATTTAGAGAAGTTGAAGAGCACCAAGGACGCAATTGAAAACTTTGCTG
AGTATATCATTGAAAATCTGCTCCTTCCACTCAGAGCTTCATCAGTCAAA
ACTCCACAGCCCACGCCTGCATCACTGTCTTCCTTACAAGCGGCCGCGAC
AGCCAATTCAGCACAACGTTTATCTACTTTAAGACAGAGTTGCCTTATAC
GAGATCATCATCGGTGCGTGATTTCTCGGAAGTTCGATCGACGCGAAGCC
GAAAGGCGTCTCCAGCAAAACGGGGAAGACTGCAAAGATGATGATGGAAA
CCTTCTTCGAAATGAGTCCAGTGACCGGTTCCAATTTCTAGAAGTTGCTC
ACATCCTACCTCACTCTCTAACGGCCGTCGCTTCGGAAAACGCGGAACTG
AGTGATTCGAAGAAAAATGCTCTCCAGATTCTGAATATGTTCGACCACGG
AATAACCCATCTTATTGAATACCCCAAGATTGATAGTCCCCTAAATGCTT
TGACACTAACACATGACTACCATCAACTATTCGGCGCATTCAAAATATAT
TTCGAGCACACAGGCGCCCCATATCAATATGAGATCAAGTCGACACAGCA
AAGTTCATTTTTAAGCGATCCCTTATTACCCGTCGTTCGCACGCTGACAC
TTAGCCCCAACCGTACCATCGACCCGCCATCTCATCGGCTCCTCGCTGTT
CACCGTGCCATCGCGTGCATTATAAAAATCAGTGGTGCGGGGGATTACAT
GGAGAGTGTTCTTCGTGATATAGAGGAAGTAACTGTAAAAGCAGACGGCT
CAACAAACTTAGGACTCATCATGAATCTTCGGCTTAGTGGCTGGTTAGAT
ACATTGGCTGCCTGCTAGATGAATGGTCCTCGGATATCGGCCTTGAAACT
CGAAACCCGAAACCTTGAATATCATTCCCCAACTTATGTCCAATGCACTT
CTGAGAAGATGCCGTCGGGGCACACCCGCCACCAAGTCTCTCTGGAGGCT
GTTTTGGATTTCTCACAGCCGTTCACTCTACCACCAGATCAAAGTCGGAC
AGCAACCATTGTTTTTCATCAACTCATCAATCACTACAATACCGAGCAGG
TTGCACGCAAAGGGTACAGGCCTGCTGCGCTTGCCCAGGCTGTCTTTGAT
CACGTTTCATCAAAAGACGCATTTCTAGTTCTCTTCCTTTCATTTGTACA
TGATAGATTATGCTCGCAATCAAACAATGCGCAAAGCTCTGATCTCACTC
CTTGCCTGCTCTATTTCGATGGTTTCGACTCATGGGATTTAGAGAAGTTG
AAGAGCACCAAGGACGCAATTGAAAACTTTGCTGAGTATATCATTGAAAA
TCTGCTCCTTCCACTCAGAGCTTCATCAGTCAAAACTCCACAGCCCACGC
CTGCATCACTGTCTTCCTTACAAGCGGCCGCGACAGCCAATTCAGCACAA
CGTTTATCTACTTTAAGACAGAGTTGCCTTATACGAGATCATCATCGGTG
CGTGATTTCTCGGAAGTTCGATCGACGCGAAGCCGAAAGGCGTCTCCAGC
AAAACGGGGAAGACTGCAAAGATGATGATGGAAACCTTCTTCGAAATGAG
TCCAGTGACCGGTTCCAATTTCTAGAAGTTGCTCACATCCTACCTCACTC
TCTAACGGCCGTCGCTTCGGAAAACGCGGAACTGAGTGATTCGAAGAAAA
ATGCTCTCCAGATTCTGAATATGTTCGACCACGGAATAACCCATCTTATT
GAATACCCCAAGATTGATAGTCCCCTAAATGCTTTGACACTAACACATGA
CTACCATCAACTATTCGGCGCATTCAAAATATATTTCGAGCACACAGGCG
CCCCATATCAATATGAGATCAAGTCGACACAGCAAAGTTCATTTTTAAGC
GATCCCTTATTACCCGTCGTTCGCACGCTGACACTTAGCCCCAACCGTAC
CATCGACCCGCCATCTCATCGGCTCCTCGCTGTTCACCGTGCCATCGCGT
GCATTATAAAAATCAGTGGTGCGGGGGATTACATGGAGAGTGTTCTTCGT
GATATAGAGGAAGTAACTGTAAAAGCAGACGGCTCAACAAACTTAGGACT
CATCATGAATCTTCGGCTTAGTGGCTGGTTAGATACATTGGCTGCCTGCT
AGATGAATGGTCCTCGGATATCGGCCTTGAAACTCGAAACCCGAAACCTT
GAATATCATTCCCCAACTTATGTCCAATGCACTTCTGAGAAGATGCCGTC
GGGGCACACCCGCCACCAAGTCTCTCTGGAGGCTGTTTTGGATTTCTCAC
AGCCGTTCACTCTACCACCAGATCAAAGTCGGACAGCAACCATTGTTTTT
CATCAACTCATCAATCACTACAATACCGAGCAGGTTGCACGCAAAGGGTA
CAGGCCTGCTGCGCTTGCCCAGGCTGTCTTTGATCACGTTTCATCAAAAG
ACGCATTTCTAGTTCTCTTCCTTTCATTTGTACATGATAGATTATGCTCG
CAATCAAACAATGCGCAAAGCTCTGATCTCACTCCTTGCCTGCTCTATTT
CGATGGTTTCGACTCATGGGATTTAGAGAAGTTGAAGAGCACCAAGGACG
CAATTGAAAACTTTGCTGAGTATATCATTGAAAATCTGCTCCTTCCACTC
AGAGCTTCATCAGTCAAAACTCCACAGCCCACGCCTGCATCACTGTCTTC
CTTACAAGCGGCCGCGACAGCCAATTCAGCACAACGTTTATCTACTTTAA
GACAGAGTTGCCTTATACGAGATCATCATCGGTGCGTGATTTCTCGGAAG
TTCGATCGACGCGAAGCCGAAAGGCGTCTCCAGCAAAACGGGGAAGACTG
CAAAGATGATGATGGAAACCTTCTTCGAAATGAGTCCAGTGACCGGTTCC
AATTTCTAGAAGTTGCTCACATCCTACCTCACTCTCTAACGGCCGTCGCT
TCGGAAAACGCGGAACTGAGTGATTCGAAGAAAAATGCTCTCCAGATTCT
GAATATGTTCGACCACGGAATAACCCATCTTATTGAATACCCCAAGATTG
ATAGTCCCCTAAATGCTTTGACACTAACACATGACTACCATCAACTATTC
GGCGCATTCAAAATATATTTCGAGCACACAGGCGCCCCATATCAATATGA
GATCAAGTCGACACAGCAAAGTTCATTTTTAAGCGATCCCTTATTACCCG
TCGTTCGCACGCTGACACTTAGCCCCAACCGTACCATCGACCCGCCATCT
CATCGGCTCCTCGCTGTTCACCGTGCCATCGCGTGCATTATAAAAATCAG
TGGTGCGGGGGATTACATGGAGAGTGTTCTTCGTGATATAGAGGAAGTAA
CTGTAAAAGCAGACGGCTCAACAAACTTAGGACTCATCATGAATCTTCGG
CTTAGTGGCTGGTTAGATACATTGGCTGCCTGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008988-T1.utr5p1 | KJC3_008988-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008988-T1.utr3p1 | KJC3_008988-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003615 |
| DBxref | PFAM:PF13391 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3809115..3811806 + |
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