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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3874987..3875958+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008999-T1 ID=KJC3_008999-T1|Name=KJC3_008999-T1|organism=Aspergillus niger KJC3|type=mRNA|length=972bp|location=Sequence derived from alignment at ch6:3874987..3875958+ (Aspergillus niger KJC3)
ATGGAGATCCTTTTACAACGTGGCTATCTGGATGAAATGGTAGATATCCA
CATAGTGAAAGAAATACTTGTGGGTGCGTTGGGAGCCGGCAATCTTGCAT
TTGTTTGGCGCCTCTTGAAACACTGCGGAGTGGGCCCCCTCGCTGCACTG
GACGATTCGGATCCTGAGTACCATGGACAAAGTGTCTTGCACATTGCGGC
GCGTTACAGCGACTTAAAAACCTTCCGTGAGTTCCTGTCTAAACAGAATT
TGACTCTGAACCCGGATCGTCCCATCTATTGCTCCGCATTGGTCAGCGCA
GCTGTGGGATACAATGTCGATGTCATCGGGTATTTTCTACGAGAAGGTTT
CGGAATCAACTCCTTGTATGAAATGTTCACATCGAAAAAAGACAAAGTGA
CCGAGGCTTTGATAATCCACGTCGCCACGGCGCGGATCGGCCCCGACAAT
CGTATCGGAAAGACGGTCCGTGAAAATACCGCAGCAACAGTGAATTTCTT
GCTTGACCACGGGGCTCAGGTAGACACCAAGGATACCCTGGGGCGGACAG
CTTTATCCATTGCACTGGAGGCTGGGAACCCCGAACTCGCTAACTTGCTG
TTTCACAGAGGTGCAGATCCCCTTATTGGGCTCGAATTGCGTGATAATCT
CAGCGCGCTGGAACAACTCGTCCGGATATTCTTACGGGGGGAGTACGATA
TAAGTCACTTCACGATCCTTCAGGAGTCGTTGGAGATCATGTCTGCGAGA
GGCTATAAATGTGATGATTTCCTTCGCCTTATTCCCAGGAACGAGGGCAC
ATTATCTCGTCCGAAGGTGCTCTCGCAGTTTGATGACGCCCCTGGTGTAA
GGGGGCCACTACTGTTGGCATACTACGAGGACAGAATTTATGTGCGATGG
TCACACTTCTTCTTGATCAGGGAGATGAGGAAACGATATTGGCGTGCCTT
GTATCCAAGTTCGTCTGAATGA back to topCoding sequence (CDS) from alignment at ch6:3874987..3875958+ >KJC3_008999-T1 ID=KJC3_008999-T1|Name=KJC3_008999-T1|organism=Aspergillus niger KJC3|type=CDS|length=972bp|location=Sequence derived from alignment at ch6:3874987..3875958+ (Aspergillus niger KJC3)
ATGGAGATCCTTTTACAACGTGGCTATCTGGATGAAATGGTAGATATCCA
CATAGTGAAAGAAATACTTGTGGGTGCGTTGGGAGCCGGCAATCTTGCAT
TTGTTTGGCGCCTCTTGAAACACTGCGGAGTGGGCCCCCTCGCTGCACTG
GACGATTCGGATCCTGAGTACCATGGACAAAGTGTCTTGCACATTGCGGC
GCGTTACAGCGACTTAAAAACCTTCCGTGAGTTCCTGTCTAAACAGAATT
TGACTCTGAACCCGGATCGTCCCATCTATTGCTCCGCATTGGTCAGCGCA
GCTGTGGGATACAATGTCGATGTCATCGGGTATTTTCTACGAGAAGGTTT
CGGAATCAACTCCTTGTATGAAATGTTCACATCGAAAAAAGACAAAGTGA
CCGAGGCTTTGATAATCCACGTCGCCACGGCGCGGATCGGCCCCGACAAT
CGTATCGGAAAGACGGTCCGTGAAAATACCGCAGCAACAGTGAATTTCTT
GCTTGACCACGGGGCTCAGGTAGACACCAAGGATACCCTGGGGCGGACAG
CTTTATCCATTGCACTGGAGGCTGGGAACCCCGAACTCGCTAACTTGCTG
TTTCACAGAGGTGCAGATCCCCTTATTGGGCTCGAATTGCGTGATAATCT
CAGCGCGCTGGAACAACTCGTCCGGATATTCTTACGGGGGGAGTACGATA
TAAGTCACTTCACGATCCTTCAGGAGTCGTTGGAGATCATGTCTGCGAGA
GGCTATAAATGTGATGATTTCCTTCGCCTTATTCCCAGGAACGAGGGCAC
ATTATCTCGTCCGAAGGTGCTCTCGCAGTTTGATGACGCCCCTGGTGTAA
GGGGGCCACTACTGTTGGCATACTACGAGGACAGAATTTATGTGCGATGG
TCACACTTCTTCTTGATCAGGGAGATGAGGAAACGATATTGGCGTGCCTT
GTATCCAAGTTCGTCTGAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.19 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3874987..3875958 + |
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