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KJC3_009018-T1, KJC3_009018-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009018-T1
Unique NameKJC3_009018-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3988297..3989444+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009018-T1 ID=KJC3_009018-T1|Name=KJC3_009018-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1148bp|location=Sequence derived from alignment at ch6:3988297..3989444+ (Aspergillus niger KJC3)
ATGGCGGTGAGGCTTAACGAGGCTGTCTGTAGCAGTTCTCACTTCTCTTT
ACATTCCAGTTCCCTCTCCATCCTACTTCCCTTCGCCACAATGACGACCT
ATGTTCTTTACAGTCCTGACGGCGCAATTGACGAATTCTTCAACTCGAAC
ACTACTGTCACAAGACAGCAATGCGATGAATTCGCCATCTCTCGCGCTGG
CGGCGTGTCCACTGCTTTACAGATGCAAGGAGTGTGTAGCTATACCGTGG
CAGCGGGGACCAACAAATCCAAGCTCTTCCAGTTCCGAGATGAAAACTCT
ACCATTGATATTGGCAACATTACCATTGCCAAAGCAATCCATCCCGAATT
TGTGGCTAGCTGCAAATATCTTGGTACCATGGGCGATTCGCGGCCAGTCT
ACATCTACGAGATGGAGCATCTTCCTGGGACTGCTCACATAATGGCGCGA
ATTCCTCCAGACGACATGTCCCGACAGCGTAACACTATCAAGGACTTTGC
AAGGTACGTCTAGCAAAGTTTTTACTTGATTCGTAAGAACTAACACTTTA
GAATAGGTTCTTTGCACAGTCATGGAACAACGATCTACACCCATGCTCAG
ATGCAACCGCGGCCTTGCTCATGGAGTTTCAATCAAATTTTGACCTTCTT
GCTCGAGACCTGCCGTCTCGCTTTGCATCAAACCTAGAAAGGGTCCGCAA
GGAGCTCCCGTCTATCTTCTCGGAAGCCTTCCACTTTGTTCTTAGCCACG
GTGACCTTAACGTGATGAATGTCCTCGTCAATCCCAAAACAGGAAATATC
ACAGGGATTGTCGACTGGGCTGAATCAAGGATTCTGCCGTTCGGCTTCGC
GCTATACGGACTTGAGAATTTTTTGGGTCGGATGAATTCAGAAGGGTGGC
ACTACTACGATCGCTACCGCGAACTGGAGAGCCTTTTCTGGCAAACCTTT
CGAGAGGAGGCTCATAATTTCTCTGACGCTGATTTGTATCTGACCAGCGC
TGCGAGGATGGCTGGACTTTTCTACCATTATGGATTTAATTTTGACACAA
ATGGCGTGGTGCAAAGTGTGCGGATGGATCAGCCGGATGGTTCACTCGCA
TATCTCGATGCTTTCTGTGCTGTTGGCGAGTGGAGTCCTCTTTCGTGA
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Coding sequence (CDS) from alignment at ch6:3988297..3989444+

>KJC3_009018-T1 ID=KJC3_009018-T1|Name=KJC3_009018-T1|organism=Aspergillus niger KJC3|type=CDS|length=2190bp|location=Sequence derived from alignment at ch6:3988297..3989444+ (Aspergillus niger KJC3)
ATGGCGGTGAGGCTTAACGAGGCTGTCTGTAGCAGTTCTCACTTCTCTTT
ACATTCCAGTTCCCTCTCCATCCTACTTCCCTTCGCCACAATGACGACCT
ATGTTCTTTACAGTCCTGACGGCGCAATTGACGAATTCTTCAACTCGAAC
ACTACTGTCACAAGACAGCAATGCGATGAATTCGCCATCTCTCGCGCTGG
CGGCGTGTCCACTGCTTTACAGATGCAAGGAGTGTGTAGCTATACCGTGG
CAGCGGGGACCAACAAATCCAAGCTCTTCCAGTTCCGAGATGAAAACTCT
ACCATTGATATTGGCAACATTACCATTGCCAAAGCAATCCATCCCGAATT
TGTGGCTAGCTGCAAATATCTTGGTACCATGGGCGATTCGCGGCCAGTCT
ACATCTACGAGATGGAGCATCTTCCTGGGACTGCTCACATAATGGCGCGA
ATTCCTCCAGACGACATGTCCCGACAGCGTAACACTATCAAGGACTTTGC
AAGGTTCTTTGCACAGTCATGGAACAACGATCTACACCCATGCTCAGATG
CAACCGCGGCCTTGCTCATGGAGTTTCAATCAAATTTTGACCTTCTTGCT
CGAGACCTGCCGTCTCGCTTTGCATCAAACCTAGAAAGGGTCCGCAAGGA
GCTCCCGTCTATCTTCTCGGAAGCCTTCCACTTTGTTCTTAGCCACGGTG
ACCTTAACGTGATGAATGTCCTCGTCAATCCCAAAACAGGAAATATCACA
GGGATTGTCGACTGGGCTGAATCAAGGATTCTGCCGTTCGGCTTCGCGCT
ATACGGACTTGAGAATTTTTTGGGTCGGATGAATTCAGAAGGGTGGCACT
ACTACGATCGCTACCGCGAACTGGAGAGCCTTTTCTGGCAAACCTTTCGA
GAGGAGGCTCATAATTTCTCTGACGCTGATTTGTATCTGACCAGCGCTGC
GAGGATGGCTGGACTTTTCTACCATTATGGATTTAATTTTGACACAAATG
GCGTGGTGCAAAGTGTGCGGATGGATCAGCCGGATGGTTCACTCGCATAT
CTCGATGCTTTCTGTGCTGTTGGCGAGTGGAGTCCTCTTTCGTGAATGGC
GGTGAGGCTTAACGAGGCTGTCTGTAGCAGTTCTCACTTCTCTTTACATT
CCAGTTCCCTCTCCATCCTACTTCCCTTCGCCACAATGACGACCTATGTT
CTTTACAGTCCTGACGGCGCAATTGACGAATTCTTCAACTCGAACACTAC
TGTCACAAGACAGCAATGCGATGAATTCGCCATCTCTCGCGCTGGCGGCG
TGTCCACTGCTTTACAGATGCAAGGAGTGTGTAGCTATACCGTGGCAGCG
GGGACCAACAAATCCAAGCTCTTCCAGTTCCGAGATGAAAACTCTACCAT
TGATATTGGCAACATTACCATTGCCAAAGCAATCCATCCCGAATTTGTGG
CTAGCTGCAAATATCTTGGTACCATGGGCGATTCGCGGCCAGTCTACATC
TACGAGATGGAGCATCTTCCTGGGACTGCTCACATAATGGCGCGAATTCC
TCCAGACGACATGTCCCGACAGCGTAACACTATCAAGGACTTTGCAAGGT
TCTTTGCACAGTCATGGAACAACGATCTACACCCATGCTCAGATGCAACC
GCGGCCTTGCTCATGGAGTTTCAATCAAATTTTGACCTTCTTGCTCGAGA
CCTGCCGTCTCGCTTTGCATCAAACCTAGAAAGGGTCCGCAAGGAGCTCC
CGTCTATCTTCTCGGAAGCCTTCCACTTTGTTCTTAGCCACGGTGACCTT
AACGTGATGAATGTCCTCGTCAATCCCAAAACAGGAAATATCACAGGGAT
TGTCGACTGGGCTGAATCAAGGATTCTGCCGTTCGGCTTCGCGCTATACG
GACTTGAGAATTTTTTGGGTCGGATGAATTCAGAAGGGTGGCACTACTAC
GATCGCTACCGCGAACTGGAGAGCCTTTTCTGGCAAACCTTTCGAGAGGA
GGCTCATAATTTCTCTGACGCTGATTTGTATCTGACCAGCGCTGCGAGGA
TGGCTGGACTTTTCTACCATTATGGATTTAATTTTGACACAAATGGCGTG
GTGCAAAGTGTGCGGATGGATCAGCCGGATGGTTCACTCGCATATCTCGA
TGCTTTCTGTGCTGTTGGCGAGTGGAGTCCTCTTTCGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009018KJC3_009018Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009018-T1.exon1KJC3_009018-T1.exon1Aspergillus niger KJC3exon
KJC3_009018-T1.exon2KJC3_009018-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009018-T1.cdsKJC3_009018-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009018-T1KJC3_009018-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011009
DBxrefInterPro:IPR002575
DBxrefPFAM:PF01636
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3988297..3989444 +
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