You are here

Home

KJC3_009024-T1, KJC3_009024-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009024-T1
Unique NameKJC3_009024-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4005956..4006609+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009024-T1 ID=KJC3_009024-T1|Name=KJC3_009024-T1|organism=Aspergillus niger KJC3|type=mRNA|length=654bp|location=Sequence derived from alignment at ch6:4005956..4006609+ (Aspergillus niger KJC3)
AGAGAAGGGTTTCTGGGAACTTTACCTCGTGTTCCAGGATCAACATACCT
CCCAGGATGGGTGTTCACGTTCTCAGAGACAGAATTTGCACTCCTAGGCA
AGCTAACCCGCAATCCTGAGAGCTTCAAACCCATTCCTGGGAGTAACTGT
GCCTATACTGGGACCACCATTTTTGGATGGGTCTAATAAGCTTCATTTCG
GCGGAAACCCTCAGAGTATTCACATTGAGGTAAGGAATCGAGTTTAACAT
ATGCAACGGCCATTTTCTGGTTAAGTGCTGTGTTTACGAAGTTAAACGAC
CAATGGTTTTCTCAGTTTGCATCTAACGCCATGTCCGATGCGGTTCTGAC
TAGCTCAAATAGATCAACTAGAGCCAGTTCCATTGTTGTCGACGAGGATG
ACGAGCAAAAGCCAGAGGAAGATAACTCGGACGCCGATACAGTTCGTATG
ACTACTCCAGATTACGAAGGATGGGCCAGCGAAAATTGTCGCATTGAATC
ACAGAATTTGTTCCATGCGGAATCTACTCCGGCTTCAACATTTCTGAAGT
ACCGTAGCTGCCAGCAATCTGACTATACTCAAATCGCTCGATCTGGCTCT
CCTATAGCAGGAGAAGAGTCAAACAAGACAGGAGTTTTCAAGAAGGGTAC
GTGA
back to top

Coding sequence (CDS) from alignment at ch6:4005956..4006609+

>KJC3_009024-T1 ID=KJC3_009024-T1|Name=KJC3_009024-T1|organism=Aspergillus niger KJC3|type=CDS|length=690bp|location=Sequence derived from alignment at ch6:4005956..4006609+ (Aspergillus niger KJC3)
ATGGGTCTAATAAGCTTCATTTCGGCGGAAACCCTCAGAGTATTCACATT
GAGATCAACTAGAGCCAGTTCCATTGTTGTCGACGAGGATGACGAGCAAA
AGCCAGAGGAAGATAACTCGGACGCCGATACAGTTCGTATGACTACTCCA
GATTACGAAGGATGGGCCAGCGAAAATTGTCGCATTGAATCACAGAATTT
GTTCCATGCGGAATCTACTCCGGCTTCAACATTTCTGAAGTACCGTAGCT
GCCAGCAATCTGACTATACTCAAATCGCTCGATCTGGCTCTCCTATAGCA
GGAGAAGAGTCAAACAAGACAGGAGTTTTCAAGAAGGGTACGTGAATGGG
TCTAATAAGCTTCATTTCGGCGGAAACCCTCAGAGTATTCACATTGAGAT
CAACTAGAGCCAGTTCCATTGTTGTCGACGAGGATGACGAGCAAAAGCCA
GAGGAAGATAACTCGGACGCCGATACAGTTCGTATGACTACTCCAGATTA
CGAAGGATGGGCCAGCGAAAATTGTCGCATTGAATCACAGAATTTGTTCC
ATGCGGAATCTACTCCGGCTTCAACATTTCTGAAGTACCGTAGCTGCCAG
CAATCTGACTATACTCAAATCGCTCGATCTGGCTCTCCTATAGCAGGAGA
AGAGTCAAACAAGACAGGAGTTTTCAAGAAGGGTACGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009024KJC3_009024Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009024-T1.utr5p1KJC3_009024-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009024-T1.exon1KJC3_009024-T1.exon1Aspergillus niger KJC3exon
KJC3_009024-T1.exon2KJC3_009024-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009024-T1.cdsKJC3_009024-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009024-T1KJC3_009024-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4005956..4006609 +
Powered by Drupal