|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4047407..4048079- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009035-T1 ID=KJC3_009035-T1|Name=KJC3_009035-T1|organism=Aspergillus niger KJC3|type=mRNA|length=673bp|location=Sequence derived from alignment at ch6:4047407..4048079- (Aspergillus niger KJC3)
ATTTGTTTCGTTATCCATGCTTGAAATTATTCATAATCCACAAGAAATGG
AGCATGATGTGACGCAGCGTATTTCTATAATTATCCTCAACAATCTTCAA
GAGGGCGACATTACCATCAAAAACACCGCCATAATCAGGTACTTCAAAGT
TGCTACCGACCATAGACTGAATATGTACTAATGTTCTTTGGAAAAAGTGG
TCAACCGTACAAAGATGGCGAGCTTGAACTACTGTCACCTGAAGATGTGG
ATAAGACAGTGGTCCCACGTGGCGGGAAAAGAACAATCTCTTTTTGCGGC
AGCGCAACTTTCAGATTGGGAGTGGAAGGCATATTAGGATTACACTGCGA
CGCCCACGGCCGAATTGCCTCGCTGTATTGGAATGGTCCTTGGACTCGGA
TTGGAAATCAATTTGACGTGACAAACCTCAACAGTGAAGAGCATATAATA
ACCGTGTCCCCTATTCCTGGGAGCGGTACTTTAGGAGACGTCTCAGTTAA
TGTTGCACGCATTGGTCACGATTTTCAACGCCCTAATCGCAACGAAAGGT
GTATATTCTCAGTCTGTGGAACCCTAGCTACTTTTTGTTCCAATCAATAA
ACAATAAGAGATAAGAATACACGATGCGCTTAAATGAGTCGACCTATATA
ATTCTAAGGGTACTTCTGAATGT back to topCoding sequence (CDS) from alignment at ch6:4047407..4048079- >KJC3_009035-T1 ID=KJC3_009035-T1|Name=KJC3_009035-T1|organism=Aspergillus niger KJC3|type=CDS|length=1050bp|location=Sequence derived from alignment at ch6:4047407..4048079- (Aspergillus niger KJC3)
TGGTCAACCGTACAAAGATGGCGAGCTTGAACTACTGTCACCTGAAGATG
TGGATAAGACAGTGGTCCCACGTGGCGGGAAAAGAACAATCTCTTTTTGC
GGCAGCGCAACTTTCAGATTGGGAGTGGAAGGCATATTAGGATTACACTG
CGACGCCCACGGCCGAATTGCCTCGCTGTATTGGAATGGTCCTTGGACTC
GGATTGGAAATCAATTTGACGTGACAAACCTCAACAGTGAAGAGCATATA
ATAACCGTGTCCCCTATTCCTGGGAGCGGTACTTTAGGAGACGTCTCAGT
TAATGTTGCACGCATTGGTCACGATTTTCAACGCCCTAATCGCAACGAAA
GGTGTATATTCTCAGTCTGTGGAACCCTAGCTACTTTTTGTTCCAATCAA
TAAATGCTTGAAATTATTCATAATCCACAAGAAATGGAGCATGATGTGAC
GCAGCGTATTTCTATAATTATCCTCAACAATCTTCAAGAGGGCGACATTA
CCATCAAAAACACCGCCATAATCAGTGGTCAACCGTACAAAGATGGCGAG
CTTGAACTACTGTCACCTGAAGATGTGGATAAGACAGTGGTCCCACGTGG
CGGGAAAAGAACAATCTCTTTTTGCGGCAGCGCAACTTTCAGATTGGGAG
TGGAAGGCATATTAGGATTACACTGCGACGCCCACGGCCGAATTGCCTCG
CTGTATTGGAATGGTCCTTGGACTCGGATTGGAAATCAATTTGACGTGAC
AAACCTCAACAGTGAAGAGCATATAATAACCGTGTCCCCTATTCCTGGGA
GCGGTACTTTAGGAGACGTCTCAGTTAATGTTGCACGCATTGGTCACGAT
TTTCAACGCCCTAATCGCAACGAAAGGTGTATATTCTCAGTCTGTGGAAC
CCTAGCTACTTTTTGTTCCAATCAATAAATGCTTGAAATTATTCATAATC
CACAAGAAATGGAGCATGATGTGACGCAGCGTATTTCTATAATTATCCTC
AACAATCTTCAAGAGGGCGACATTACCATCAAAAACACCGCCATAATCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019836 | hemolysis by symbiont of host erythrocytes |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009035-T1.utr3p1 | KJC3_009035-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009035-T1.utr5p1 | KJC3_009035-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009413 |
| DBxref | PFAM:PF06355 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4047407..4048079 - |
|
