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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4077483..4078363+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009046-T1 ID=KJC3_009046-T1|Name=KJC3_009046-T1|organism=Aspergillus niger KJC3|type=mRNA|length=881bp|location=Sequence derived from alignment at ch6:4077483..4078363+ (Aspergillus niger KJC3)
AGCAGATTTGAGCCACTTTTTATCACAAGCTTTTACCCCACACCGCTTCC
TCGCAACTATCTATCAATTTTCTGGTCTGACGGTTTCATCCTTGAGAGGG
CTATATGAATGTCTTTTAACTCTATCTACAGCCTCGAAAGCACCTTCTTA
ACAGATTTTGCACCCAACCCATGATGTGGGCAACAACATCATCCAGCTCC
TATGCCGGGACTTGCATATTTCTAGTGATCCTTGGCGTTATTCTTTTGTT
TTCGGTTTCTTCCAGATCTATGCTCGAGAAGCGATGGTCCAGACGCGAAC
TCAACAGACGGCATGTCCTCTTTCTCAACAAGGACAGTTCCGGACTCATG
GATAAGTCGGAAACGTTACTGACTCCGAATGGCCCGGAAAAGGATATTAT
CATTATCGAACAACCTACAAGGGCACGGAGATCGTGGAAAACTATCATGC
TGAAAGCCACAATGACTACAGTGATCTTGGCAATTTTATACATACAGTAA
GTATCTTCGCTAGCTTGCGACCGCACCTGTTTTTAACGACTCGCAGGATG
ATTTTCATCATGACAGAGAACATTGGGTATATTTTGTCTATCCTTGGCGG
CGTGTTTCTTGGAACATTAGTGATGGGGAGATACGCTCCGACAGCGACGG
ATGCAAATCTACATCACACCTGAAGTCATTTTTTCGGTTTCCCCTAAAGC
CGTGTAATTGCAAAATCTATCCCTAGGGAGACAAGGGACACTGTCGATCA
AAGCTTGATAAAGCCGGTGTGGAAAAGCACATGACTTAGGCATTGGGTGG
GGAAGGTGTTGTTGTTTGGTTAAGTCTTTTAAATCACCCTCCGAAAGGAT
GTTGTTTAAACTAGTTCACCGTTTTCACGAG back to topCoding sequence (CDS) from alignment at ch6:4077483..4078363+ >KJC3_009046-T1 ID=KJC3_009046-T1|Name=KJC3_009046-T1|organism=Aspergillus niger KJC3|type=CDS|length=906bp|location=Sequence derived from alignment at ch6:4077483..4078363+ (Aspergillus niger KJC3)
ATGATGTGGGCAACAACATCATCCAGCTCCTATGCCGGGACTTGCATATT
TCTAGTGATCCTTGGCGTTATTCTTTTGTTTTCGGTTTCTTCCAGATCTA
TGCTCGAGAAGCGATGGTCCAGACGCGAACTCAACAGACGGCATGTCCTC
TTTCTCAACAAGGACAGTTCCGGACTCATGGATAAGTCGGAAACGTTACT
GACTCCGAATGGCCCGGAAAAGGATATTATCATTATCGAACAACCTACAA
GGGCACGGAGATCGTGGAAAACTATCATGCTGAAAGCCACAATGACTACA
GTGATCTTGGCAATTTTATACATACAGATGATTTTCATCATGACAGAGAA
CATTGGGTATATTTTGTCTATCCTTGGCGGCGTGTTTCTTGGAACATTAG
TGATGGGGAGATACGCTCCGACAGCGACGGATGCAAATCTACATCACACC
TGAATGATGTGGGCAACAACATCATCCAGCTCCTATGCCGGGACTTGCAT
ATTTCTAGTGATCCTTGGCGTTATTCTTTTGTTTTCGGTTTCTTCCAGAT
CTATGCTCGAGAAGCGATGGTCCAGACGCGAACTCAACAGACGGCATGTC
CTCTTTCTCAACAAGGACAGTTCCGGACTCATGGATAAGTCGGAAACGTT
ACTGACTCCGAATGGCCCGGAAAAGGATATTATCATTATCGAACAACCTA
CAAGGGCACGGAGATCGTGGAAAACTATCATGCTGAAAGCCACAATGACT
ACAGTGATCTTGGCAATTTTATACATACAGATGATTTTCATCATGACAGA
GAACATTGGGTATATTTTGTCTATCCTTGGCGGCGTGTTTCTTGGAACAT
TAGTGATGGGGAGATACGCTCCGACAGCGACGGATGCAAATCTACATCAC
ACCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005375 | copper ion transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0035434 | copper ion transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009046-T1.utr3p1 | KJC3_009046-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007274 |
| DBxref | PFAM:PF04145 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4077483..4078363 + |
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