You are here

Home

KJC3_009054-T1, KJC3_009054-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009054-T1
Unique NameKJC3_009054-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4102160..4103344-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009054-T1 ID=KJC3_009054-T1|Name=KJC3_009054-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1185bp|location=Sequence derived from alignment at ch6:4102160..4103344- (Aspergillus niger KJC3)
ACCAGATCTGTATACAAAATAAATACATCATCCCCAGATGATTCCTCGTT
TTCGAATTCCTTTAGCACGCAAACTCACCCCGGTCATGGGCTCAACGGCG
AGTCTGTCGCCCTACAGATACACCACCATGGCGCATCCCGCGGTTGTCCA
ACCGGGGCCAACTGTTCCCGACTTCGTCAATGGGCATGAGAGCATACAAT
ACCCCGAACACCCGTCTCTGGCGATACCGAAGAGCGAGGATGATGCCGAG
ATCCGTCAGAAATACCGCCCCTTCATTCTTGACGATGCGGCCGAGGACTG
GGTCAGTGCCCTGGAGCTGACAACCGCCATGGATTTGGCAGCGCAGGAAC
TGCAAAAATCAAACAGCCGACTAAAGGTGCTGGTGTTGTACGGCAGCCTA
CGTCGGAGATCCTATTCTCGCCTGGTGGCGCTGGAAGCTAGCAGGATTCT
TTTCCGTCTGGGATGTGACGTGCGTGTGTTTAATCCCGAGGGGTTACCGG
TGAAGAATGATACCGAGTACGGCCATCCAAAGGTGCAGGAGCTCCGAGAG
CTCAGCAAGTGGAGTGATGGGCATGTTTGGGTATCTCCTGAACAACATGG
GAATCTTGTAAGCATTTCATTTCCCCCACCCCCCAATGCATGATATCTCA
TTACTGACCATCTACAGACCGCCGTCTTCAAAAATCAGATCGACTGGATC
CCGCTAACTACCGGGAGTGTGCGTCCAACGCAAGGCCGGACCCTCGCTAT
TGCGCAGGTGTGCGGCGGCTCGCAATCATTCAATGCTGTTAACTCTCTAC
GTCTTCTCGGCCGGTGGATGCGCATGTTTACCATTCCAAATCAATCTTCG
ATCCCGAAAGCGTATACACATTTCCCTGATGAAGGTGAACTGGGAGATCA
GAGGCTTATGCCTAGTAGTAACCGGGACCGACTGGTAGATTGCATGGAGG
AGTTTGTAAAGTACACGTTCCTCATGCGGCCCCACTTGGAACTTTTTGGT
GATCGGTTCAGTGAGCGGGAAGAGAAAAGGGCCAAGGAGGAGAAGCTGAG
GCTGGCACAAGCGGCACAACTTTAGCTTAATAGTGGGATGGGTCCGTTGT
ATATACTGTGTGGCATTGGAGAGGTCAGGCTCTAGGCTATGTACTCTACT
GCATGTGAATAAATTAGATTTGTTGAACAACATCT
back to top

Coding sequence (CDS) from alignment at ch6:4102160..4103344-

>KJC3_009054-T1 ID=KJC3_009054-T1|Name=KJC3_009054-T1|organism=Aspergillus niger KJC3|type=CDS|length=1956bp|location=Sequence derived from alignment at ch6:4102160..4103344- (Aspergillus niger KJC3)
ACCGCCGTCTTCAAAAATCAGATCGACTGGATCCCGCTAACTACCGGGAG
TGTGCGTCCAACGCAAGGCCGGACCCTCGCTATTGCGCAGGTGTGCGGCG
GCTCGCAATCATTCAATGCTGTTAACTCTCTACGTCTTCTCGGCCGGTGG
ATGCGCATGTTTACCATTCCAAATCAATCTTCGATCCCGAAAGCGTATAC
ACATTTCCCTGATGAAGGTGAACTGGGAGATCAGAGGCTTATGCCTAGTA
GTAACCGGGACCGACTGGTAGATTGCATGGAGGAGTTTGTAAAGTACACG
TTCCTCATGCGGCCCCACTTGGAACTTTTTGGTGATCGGTTCAGTGAGCG
GGAAGAGAAAAGGGCCAAGGAGGAGAAGCTGAGGCTGGCACAAGCGGCAC
AACTTTAGATGATTCCTCGTTTTCGAATTCCTTTAGCACGCAAACTCACC
CCGGTCATGGGCTCAACGGCGAGTCTGTCGCCCTACAGATACACCACCAT
GGCGCATCCCGCGGTTGTCCAACCGGGGCCAACTGTTCCCGACTTCGTCA
ATGGGCATGAGAGCATACAATACCCCGAACACCCGTCTCTGGCGATACCG
AAGAGCGAGGATGATGCCGAGATCCGTCAGAAATACCGCCCCTTCATTCT
TGACGATGCGGCCGAGGACTGGGTCAGTGCCCTGGAGCTGACAACCGCCA
TGGATTTGGCAGCGCAGGAACTGCAAAAATCAAACAGCCGACTAAAGGTG
CTGGTGTTGTACGGCAGCCTACGTCGGAGATCCTATTCTCGCCTGGTGGC
GCTGGAAGCTAGCAGGATTCTTTTCCGTCTGGGATGTGACGTGCGTGTGT
TTAATCCCGAGGGGTTACCGGTGAAGAATGATACCGAGTACGGCCATCCA
AAGGTGCAGGAGCTCCGAGAGCTCAGCAAGTGGAGTGATGGGCATGTTTG
GGTATCTCCTGAACAACATGGGAATCTTACCGCCGTCTTCAAAAATCAGA
TCGACTGGATCCCGCTAACTACCGGGAGTGTGCGTCCAACGCAAGGCCGG
ACCCTCGCTATTGCGCAGGTGTGCGGCGGCTCGCAATCATTCAATGCTGT
TAACTCTCTACGTCTTCTCGGCCGGTGGATGCGCATGTTTACCATTCCAA
ATCAATCTTCGATCCCGAAAGCGTATACACATTTCCCTGATGAAGGTGAA
CTGGGAGATCAGAGGCTTATGCCTAGTAGTAACCGGGACCGACTGGTAGA
TTGCATGGAGGAGTTTGTAAAGTACACGTTCCTCATGCGGCCCCACTTGG
AACTTTTTGGTGATCGGTTCAGTGAGCGGGAAGAGAAAAGGGCCAAGGAG
GAGAAGCTGAGGCTGGCACAAGCGGCACAACTTTAGATGATTCCTCGTTT
TCGAATTCCTTTAGCACGCAAACTCACCCCGGTCATGGGCTCAACGGCGA
GTCTGTCGCCCTACAGATACACCACCATGGCGCATCCCGCGGTTGTCCAA
CCGGGGCCAACTGTTCCCGACTTCGTCAATGGGCATGAGAGCATACAATA
CCCCGAACACCCGTCTCTGGCGATACCGAAGAGCGAGGATGATGCCGAGA
TCCGTCAGAAATACCGCCCCTTCATTCTTGACGATGCGGCCGAGGACTGG
GTCAGTGCCCTGGAGCTGACAACCGCCATGGATTTGGCAGCGCAGGAACT
GCAAAAATCAAACAGCCGACTAAAGGTGCTGGTGTTGTACGGCAGCCTAC
GTCGGAGATCCTATTCTCGCCTGGTGGCGCTGGAAGCTAGCAGGATTCTT
TTCCGTCTGGGATGTGACGTGCGTGTGTTTAATCCCGAGGGGTTACCGGT
GAAGAATGATACCGAGTACGGCCATCCAAAGGTGCAGGAGCTCCGAGAGC
TCAGCAAGTGGAGTGATGGGCATGTTTGGGTATCTCCTGAACAACATGGG
AATCTT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009054KJC3_009054Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009054-T1KJC3_009054-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009054-T1.cdsKJC3_009054-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009054-T1.utr3p1KJC3_009054-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009054-T1.exon2KJC3_009054-T1.exon2Aspergillus niger KJC3exon
KJC3_009054-T1.exon1KJC3_009054-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009054-T1.utr5p1KJC3_009054-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR014063
DBxrefInterPro:IPR029039
DBxrefInterPro:IPR005025
DBxrefPFAM:PF03358
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4102160..4103344 -
Powered by Drupal