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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4157043..4159073+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009069-T1 ID=KJC3_009069-T1|Name=KJC3_009069-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2031bp|location=Sequence derived from alignment at ch6:4157043..4159073+ (Aspergillus niger KJC3) TTGTGCCTCTTTGATGTCGTTGACAGACCTCCAACATAAGCCATGTTGCC
GTTCATGAGGAACTTGAGGAAACTCCGACGCAACCAGCAAATCTCGCAGA
TGTCAATCGTTTGCCGAGGTAAGGGGATGACGAACGTTGCGCAGGGAGGG
CGTCACTAAGGTAAATAAGCAGGTAAACCCATCACTCGCGACGAACTTTT
CACATATACCAATGGCCGCTTCCTCGTCGATGAGGACCGTCAGTTTGCCC
GGCGCTACCGAAAATTCAACTTGGATGCCCTCTGTGATATAGCCGCTGCA
GCTGGTGAGAGCACATCTCGAATCATTGCCATTGAGAAGCTCGAAGGAGG
TTTCAGCAAGGCCCTTCTAATGAAGAAGGAGGACGGATGTGAATTGATTG
CGAAAGTTCCCTGCCGCATTGCTGGCCCGGCCTTCCTCACGACAGCGTCC
GAAGTAGGTACTTTGGAATACAGTACGTATATCCTATACCTCTCGTGGAT
TGTCAAAGCGCTCACGCGCCACTTATCAGTCAGAAAGTACACGAGTATCC
CTGTTCCCCGTGTCTTTTCTTGGTCGCCACACGACTCAAACTCTGTCGGG
GCAGAGTATATCGTCATGGAGAAGGCGATTGGGATTCCACTATTTGAACG
ATGGGGCAAGATGGCAGAAATCGAGAAACTGCAGCTTATAAAGAACTTGA
CTCAACTTGAGGCTCAATTGTCAGCTATTTCGTTTCCTGCATATGGCGGT
CTGTATTTGCGTGCAGATGCAGATCGTTTAAAACACCAAGACCTCGGAGG
CAACTTGGACGAACAGTGCCCCTTCTGCATTGGCCCTTCACCTGACCGCT
CCTTTGACGTTGATGCGGCAGCTGATCTACCCACCGAGAATGAGTCAATC
AACAATGGGCCTTGTAAGCTTCTGTTGTTCTTCTTTTCCCATTCAAACTA
ATGATTGTGCAGGGGATAGCTTATCAGATCTCGGGATTTCAATTGCCAAA
CGAGAGCTCTCTCGGATAGCGTCGCAGTTTGCAGACAACCAGTCAATGGC
CCATCGGGGAAGCCCCCAAGAACAAATACATCTCCTGGAAATTACAATCA
GCCTGATGGGGATGTTGGATTCGCACCCAGTACTAACTCAACTCGCCCAG
CCTACACTCTGGCACACTGACCTCCATATGGGAAATATCTTTGTGGCACC
TGATAACAACTCCCAGATTACAGCATTAATCGATGTGCAGTCTCTATCGG
TGCTCCCGTTGTTCCTTCAAGCGCGATGGCCAGTGTTCCTGCAGCCCCCT
CGGGAATATACTAGAGGCCTTGTCCAGCCTGTGCTCCCCACTGACTTTGA
TTCTTTAGACGAAGAAGACAAGGTCGCTGCTCTACGTGACTGGACACAAG
CCAAAATGGCGAAAGCGTATGAAGTCTCAACCTTTATAGAGAACAGACTT
GCCCATAACGCCATGAATGTACCGCGTGTTTTTCGCGAACTCTTCATTCG
CACTGGAGAAACGTCTGATGTCGGAGTCGTACCATTGCGAGAGTGCTTGA
TTGAGATATTTCAGAACTGGTCGAATCTGGGCATTCCCGGACATTGTCCT
TACTCCTTCAGCCAGGAAGATATCGATGCACATAAACAGCAATTCGCCGA
ATATGAAGAGTGGAATGAGGTCCAGCAGCTCGCTCAGGAATCTCTAGACA
CCGATGCAGAAGGGTGGGTGGCGCCGCAGCTGGATTTTGTCCAAAAACAA
CGTCAGAACAAGGAGCTGTTATCGATGTATATTGCGCGAACGGAGGAAAA
AAAATCTCCCGAAGAAGTAATGCGGATATGGCCTTTTCCAGAATAACAAA
ATAAAGGGGACTCGGACACATCGGCTGGCTGGTTTATGGATGAGCGAGTT
GCACCCAGGGCTAGGATCTGAAGTTGATTGAATTATCTGTGGACAGACGG
ATATATTTAGAATGCTACTACTGTAACCATGAACATGGAATTGAATCGTC
TCCCAGTACAACCAATTCGATCCTTTCCTTT back to topCoding sequence (CDS) from alignment at ch6:4157043..4159073+ >KJC3_009069-T1 ID=KJC3_009069-T1|Name=KJC3_009069-T1|organism=Aspergillus niger KJC3|type=CDS|length=6576bp|location=Sequence derived from alignment at ch6:4157043..4159073+ (Aspergillus niger KJC3) ATGTTGCCGTTCATGAGGAACTTGAGGAAACTCCGACGCAACCAGCAAAT CTCGCAGATGTCAATCGTTTGCCGAGGTAAACCCATCACTCGCGACGAAC TTTTCACATATACCAATGGCCGCTTCCTCGTCGATGAGGACCGTCAGTTT GCCCGGCGCTACCGAAAATTCAACTTGGATGCCCTCTGTGATATAGCCGC TGCAGCTGGTGAGAGCACATCTCGAATCATTGCCATTGAGAAGCTCGAAG GAGGTTTCAGCAAGGCCCTTCTAATGAAGAAGGAGGACGGATGTGAATTG ATTGCGAAAGTTCCCTGCCGCATTGCTGGCCCGGCCTTCCTCACGACAGC GTCCGAAGTAGGTACTTTGGAATACATCAGAAAGTACACGAGTATCCCTG TTCCCCGTGTCTTTTCTTGGTCGCCACACGACTCAAACTCTGTCGGGGCA GAGTATATCGTCATGGAGAAGGCGATTGGGATTCCACTATTTGAACGATG GGGCAAGATGGCAGAAATCGAGAAACTGCAGCTTATAAAGAACTTGACTC AACTTGAGGCTCAATTGTCAGCTATTTCGTTTCCTGCATATGGCGGTCTG TATTTGCGTGCAGATGCAGATCGTTTAAAACACCAAGACCTCGGAGGCAA CTTGGACGAACAGTGCCCCTTCTGCATTGGCCCTTCACCTGACCGCTCCT TTGACGTTGATGCGGCAGCTGATCTACCCACCGAGAATGAGTCAATCAAC AATGGGCCTTGGGATAGCTTATCAGATCTCGGGATTTCAATTGCCAAACG AGAGCTCTCTCGGATAGCGTCGCAGTTTGCAGACAACCAGTCAATGGCCC ATCGGGGAAGCCCCCAAGAACAAATACATCTCCTGGAAATTACAATCAGC CTGATGGGGATGTTGGATTCGCACCCAGTACTAACTCAACTCGCCCAGCC TACACTCTGGCACACTGACCTCCATATGGGAAATATCTTTGTGGCACCTG ATAACAACTCCCAGATTACAGCATTAATCGATGTGCAGTCTCTATCGGTG CTCCCGTTGTTCCTTCAAGCGCGATGGCCAGTGTTCCTGCAGCCCCCTCG GGAATATACTAGAGGCCTTGTCCAGCCTGTGCTCCCCACTGACTTTGATT CTTTAGACGAAGAAGACAAGGTCGCTGCTCTACGTGACTGGACACAAGCC AAAATGGCGAAAGCGTATGAAGTCTCAACCTTTATAGAGAACAGACTTGC CCATAACGCCATGAATGTACCGCGTGTTTTTCGCGAACTCTTCATTCGCA CTGGAGAAACGTCTGATGTCGGAGTCGTACCATTGCGAGAGTGCTTGATT GAGATATTTCAGAACTGGTCGAATCTGGGCATTCCCGGACATTGTCCTTA CTCCTTCAGCCAGGAAGATATCGATGCACATAAACAGCAATTCGCCGAAT ATGAAGAGTGGAATGAGGTCCAGCAGCTCGCTCAGGAATCTCTAGACACC GATGCAGAAGGGTGGGTGGCGCCGCAGCTGGATTTTGTCCAAAAACAACG TCAGAACAAGGAGCTGTTATCGATGTATATTGCGCGAACGGAGGAAAAAA AATCTCCCGAAGAAGTAATGCGGATATGGCCTTTTCCAGAATAAATGTTG CCGTTCATGAGGAACTTGAGGAAACTCCGACGCAACCAGCAAATCTCGCA GATGTCAATCGTTTGCCGAGGTAAACCCATCACTCGCGACGAACTTTTCA CATATACCAATGGCCGCTTCCTCGTCGATGAGGACCGTCAGTTTGCCCGG CGCTACCGAAAATTCAACTTGGATGCCCTCTGTGATATAGCCGCTGCAGC TGGTGAGAGCACATCTCGAATCATTGCCATTGAGAAGCTCGAAGGAGGTT TCAGCAAGGCCCTTCTAATGAAGAAGGAGGACGGATGTGAATTGATTGCG AAAGTTCCCTGCCGCATTGCTGGCCCGGCCTTCCTCACGACAGCGTCCGA AGTAGGTACTTTGGAATACATCAGAAAGTACACGAGTATCCCTGTTCCCC GTGTCTTTTCTTGGTCGCCACACGACTCAAACTCTGTCGGGGCAGAGTAT ATCGTCATGGAGAAGGCGATTGGGATTCCACTATTTGAACGATGGGGCAA GATGGCAGAAATCGAGAAACTGCAGCTTATAAAGAACTTGACTCAACTTG AGGCTCAATTGTCAGCTATTTCGTTTCCTGCATATGGCGGTCTGTATTTG CGTGCAGATGCAGATCGTTTAAAACACCAAGACCTCGGAGGCAACTTGGA CGAACAGTGCCCCTTCTGCATTGGCCCTTCACCTGACCGCTCCTTTGACG TTGATGCGGCAGCTGATCTACCCACCGAGAATGAGTCAATCAACAATGGG CCTTGGGATAGCTTATCAGATCTCGGGATTTCAATTGCCAAACGAGAGCT CTCTCGGATAGCGTCGCAGTTTGCAGACAACCAGTCAATGGCCCATCGGG GAAGCCCCCAAGAACAAATACATCTCCTGGAAATTACAATCAGCCTGATG GGGATGTTGGATTCGCACCCAGTACTAACTCAACTCGCCCAGCCTACACT CTGGCACACTGACCTCCATATGGGAAATATCTTTGTGGCACCTGATAACA ACTCCCAGATTACAGCATTAATCGATGTGCAGTCTCTATCGGTGCTCCCG TTGTTCCTTCAAGCGCGATGGCCAGTGTTCCTGCAGCCCCCTCGGGAATA TACTAGAGGCCTTGTCCAGCCTGTGCTCCCCACTGACTTTGATTCTTTAG ACGAAGAAGACAAGGTCGCTGCTCTACGTGACTGGACACAAGCCAAAATG GCGAAAGCGTATGAAGTCTCAACCTTTATAGAGAACAGACTTGCCCATAA CGCCATGAATGTACCGCGTGTTTTTCGCGAACTCTTCATTCGCACTGGAG AAACGTCTGATGTCGGAGTCGTACCATTGCGAGAGTGCTTGATTGAGATA TTTCAGAACTGGTCGAATCTGGGCATTCCCGGACATTGTCCTTACTCCTT CAGCCAGGAAGATATCGATGCACATAAACAGCAATTCGCCGAATATGAAG AGTGGAATGAGGTCCAGCAGCTCGCTCAGGAATCTCTAGACACCGATGCA GAAGGGTGGGTGGCGCCGCAGCTGGATTTTGTCCAAAAACAACGTCAGAA CAAGGAGCTGTTATCGATGTATATTGCGCGAACGGAGGAAAAAAAATCTC CCGAAGAAGTAATGCGGATATGGCCTTTTCCAGAATAAATGTTGCCGTTC ATGAGGAACTTGAGGAAACTCCGACGCAACCAGCAAATCTCGCAGATGTC AATCGTTTGCCGAGGTAAACCCATCACTCGCGACGAACTTTTCACATATA CCAATGGCCGCTTCCTCGTCGATGAGGACCGTCAGTTTGCCCGGCGCTAC CGAAAATTCAACTTGGATGCCCTCTGTGATATAGCCGCTGCAGCTGGTGA GAGCACATCTCGAATCATTGCCATTGAGAAGCTCGAAGGAGGTTTCAGCA AGGCCCTTCTAATGAAGAAGGAGGACGGATGTGAATTGATTGCGAAAGTT CCCTGCCGCATTGCTGGCCCGGCCTTCCTCACGACAGCGTCCGAAGTAGG TACTTTGGAATACATCAGAAAGTACACGAGTATCCCTGTTCCCCGTGTCT TTTCTTGGTCGCCACACGACTCAAACTCTGTCGGGGCAGAGTATATCGTC ATGGAGAAGGCGATTGGGATTCCACTATTTGAACGATGGGGCAAGATGGC AGAAATCGAGAAACTGCAGCTTATAAAGAACTTGACTCAACTTGAGGCTC AATTGTCAGCTATTTCGTTTCCTGCATATGGCGGTCTGTATTTGCGTGCA GATGCAGATCGTTTAAAACACCAAGACCTCGGAGGCAACTTGGACGAACA GTGCCCCTTCTGCATTGGCCCTTCACCTGACCGCTCCTTTGACGTTGATG CGGCAGCTGATCTACCCACCGAGAATGAGTCAATCAACAATGGGCCTTGG GATAGCTTATCAGATCTCGGGATTTCAATTGCCAAACGAGAGCTCTCTCG GATAGCGTCGCAGTTTGCAGACAACCAGTCAATGGCCCATCGGGGAAGCC CCCAAGAACAAATACATCTCCTGGAAATTACAATCAGCCTGATGGGGATG TTGGATTCGCACCCAGTACTAACTCAACTCGCCCAGCCTACACTCTGGCA CACTGACCTCCATATGGGAAATATCTTTGTGGCACCTGATAACAACTCCC AGATTACAGCATTAATCGATGTGCAGTCTCTATCGGTGCTCCCGTTGTTC CTTCAAGCGCGATGGCCAGTGTTCCTGCAGCCCCCTCGGGAATATACTAG AGGCCTTGTCCAGCCTGTGCTCCCCACTGACTTTGATTCTTTAGACGAAG AAGACAAGGTCGCTGCTCTACGTGACTGGACACAAGCCAAAATGGCGAAA GCGTATGAAGTCTCAACCTTTATAGAGAACAGACTTGCCCATAACGCCAT GAATGTACCGCGTGTTTTTCGCGAACTCTTCATTCGCACTGGAGAAACGT CTGATGTCGGAGTCGTACCATTGCGAGAGTGCTTGATTGAGATATTTCAG AACTGGTCGAATCTGGGCATTCCCGGACATTGTCCTTACTCCTTCAGCCA GGAAGATATCGATGCACATAAACAGCAATTCGCCGAATATGAAGAGTGGA ATGAGGTCCAGCAGCTCGCTCAGGAATCTCTAGACACCGATGCAGAAGGG TGGGTGGCGCCGCAGCTGGATTTTGTCCAAAAACAACGTCAGAACAAGGA GCTGTTATCGATGTATATTGCGCGAACGGAGGAAAAAAAATCTCCCGAAG AAGTAATGCGGATATGGCCTTTTCCAGAATAAATGTTGCCGTTCATGAGG AACTTGAGGAAACTCCGACGCAACCAGCAAATCTCGCAGATGTCAATCGT TTGCCGAGGTAAACCCATCACTCGCGACGAACTTTTCACATATACCAATG GCCGCTTCCTCGTCGATGAGGACCGTCAGTTTGCCCGGCGCTACCGAAAA TTCAACTTGGATGCCCTCTGTGATATAGCCGCTGCAGCTGGTGAGAGCAC ATCTCGAATCATTGCCATTGAGAAGCTCGAAGGAGGTTTCAGCAAGGCCC TTCTAATGAAGAAGGAGGACGGATGTGAATTGATTGCGAAAGTTCCCTGC CGCATTGCTGGCCCGGCCTTCCTCACGACAGCGTCCGAAGTAGGTACTTT GGAATACATCAGAAAGTACACGAGTATCCCTGTTCCCCGTGTCTTTTCTT GGTCGCCACACGACTCAAACTCTGTCGGGGCAGAGTATATCGTCATGGAG AAGGCGATTGGGATTCCACTATTTGAACGATGGGGCAAGATGGCAGAAAT CGAGAAACTGCAGCTTATAAAGAACTTGACTCAACTTGAGGCTCAATTGT CAGCTATTTCGTTTCCTGCATATGGCGGTCTGTATTTGCGTGCAGATGCA GATCGTTTAAAACACCAAGACCTCGGAGGCAACTTGGACGAACAGTGCCC CTTCTGCATTGGCCCTTCACCTGACCGCTCCTTTGACGTTGATGCGGCAG CTGATCTACCCACCGAGAATGAGTCAATCAACAATGGGCCTTGGGATAGC TTATCAGATCTCGGGATTTCAATTGCCAAACGAGAGCTCTCTCGGATAGC GTCGCAGTTTGCAGACAACCAGTCAATGGCCCATCGGGGAAGCCCCCAAG AACAAATACATCTCCTGGAAATTACAATCAGCCTGATGGGGATGTTGGAT TCGCACCCAGTACTAACTCAACTCGCCCAGCCTACACTCTGGCACACTGA CCTCCATATGGGAAATATCTTTGTGGCACCTGATAACAACTCCCAGATTA CAGCATTAATCGATGTGCAGTCTCTATCGGTGCTCCCGTTGTTCCTTCAA GCGCGATGGCCAGTGTTCCTGCAGCCCCCTCGGGAATATACTAGAGGCCT TGTCCAGCCTGTGCTCCCCACTGACTTTGATTCTTTAGACGAAGAAGACA AGGTCGCTGCTCTACGTGACTGGACACAAGCCAAAATGGCGAAAGCGTAT GAAGTCTCAACCTTTATAGAGAACAGACTTGCCCATAACGCCATGAATGT ACCGCGTGTTTTTCGCGAACTCTTCATTCGCACTGGAGAAACGTCTGATG TCGGAGTCGTACCATTGCGAGAGTGCTTGATTGAGATATTTCAGAACTGG TCGAATCTGGGCATTCCCGGACATTGTCCTTACTCCTTCAGCCAGGAAGA TATCGATGCACATAAACAGCAATTCGCCGAATATGAAGAGTGGAATGAGG TCCAGCAGCTCGCTCAGGAATCTCTAGACACCGATGCAGAAGGGTGGGTG GCGCCGCAGCTGGATTTTGTCCAAAAACAACGTCAGAACAAGGAGCTGTT ATCGATGTATATTGCGCGAACGGAGGAAAAAAAATCTCCCGAAGAAGTAA TGCGGATATGGCCTTTTCCAGAATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009069-T1.utr5p1 | KJC3_009069-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009069-T1.utr3p1 | KJC3_009069-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR011009 |
DBxref | InterPro:IPR002575 |
DBxref | PFAM:PF01636 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:4157043..4159073 + |
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