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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4208295..4209422- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009072-T1 ID=KJC3_009072-T1|Name=KJC3_009072-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1128bp|location=Sequence derived from alignment at ch6:4208295..4209422- (Aspergillus niger KJC3)
CCGATGGCACGGAGGAACCCACACATGCCGTGACTCAAACGCAGTGTCGT
AACTCAACCTGCGAATGGGACGTGCTCAGAGAAAATGTTAACTGGCATCG
ATAGAATCAAGGTCGCTAACCTCCTCAACCCAGCTTCACCTCATGCTTGC
CAAATTGAACACCAGAATAGTTCTTTATCACCCAATTCTCCTGCGGGAAG
CGACCAAAATGAAACACGAACGGGATGCTCGGCTTTTGTTCCGAGCGATG
TGAGTTTATCCTGATCATCTCTCTGTGCGCAGGCAATGAGGCTTGTTACT
ATGAGGTACTTATTTCGCATAAGCAGATACCATTAAATCATGGGAACCAC
TTCCTCGATCACGTCTTGGCCCTGAGGGTCGCTGAGCTCATCAATGATTA
CCGATCTTTACTGATCAATATCATGATCCATGTTAGGGGCATGCCGCTAC
AGAATATCTCATATTCTGTTTATACGGTGTTTATACTGGGTTATTATATT
GCCCAACGCTTATTGTCAGCCAGTTTTGACCTAGACACGACGTCGAGTTC
CTGTGGCTTCGATTGCACAGCACAGCTCAAACGGTAAGATACATGACACG
CGACTCTACGATGCCGGCTAAAGCTATATCTTGGTCTAGCAGGATAATAC
TAGATGCAAGCGCCCGTCGCCACCAACCACACAAGGTCTATCTCAGCATA
GCCGCCGCTAAACGCTGGTTGCTCAACCGTAGCTACGTGCTAAGTCTTTC
CACGGCCAAGAATCTTGAGAAACGGCTGCAAGAAGTGGATGTGTTATTTT
ACGAAGTATGTTACTTTCTTCTCGGACTTTTAAAAGACTCTACTTACGTT
TGCTAATCCACGTTATATCAAGGAAATTAACAGTGTTTCCGACCATGTGG
TAGCATCCGACTTGCGTGCTGTCGACAAAAGGAGTGGATACTGCATTGAC
GAGGATCCTCCTCTAGAAATGATCACCAGTTGGATTCGGTCGCATTATTG
AGGAATCCAAGGGTTGATCCATAGAACGTCATACAGGCTATCTCACTGAC
GTCTTTTTCTATCCTACCTAGTAGTCTGATTAGCAGTCGGATAGATGATC
ATGATGATCTTGAACTCAAACTGAGCAA back to topCoding sequence (CDS) from alignment at ch6:4208295..4209422- >KJC3_009072-T1 ID=KJC3_009072-T1|Name=KJC3_009072-T1|organism=Aspergillus niger KJC3|type=CDS|length=2868bp|location=Sequence derived from alignment at ch6:4208295..4209422- (Aspergillus niger KJC3)
GAAATTAACAGTGTTTCCGACCATGTGGTAGCATCCGACTTGCGTGCTGT
CGACAAAAGGAGTGGATACTGCATTGACGAGGATCCTCCTCTAGAAATGA
TCACCAGTTGGATTCGGTCGCATTATTGACAGGATAATACTAGATGCAAG
CGCCCGTCGCCACCAACCACACAAGGTCTATCTCAGCATAGCCGCCGCTA
AACGCTGGTTGCTCAACCGTAGCTACGTGCTAAGTCTTTCCACGGCCAAG
AATCTTGAGAAACGGCTGCAAGAAGTGGATGTGTTATTTTACGAAATACC
ATTAAATCATGGGAACCACTTCCTCGATCACGTCTTGGCCCTGAGGGTCG
CTGAGCTCATCAATGATTACCGATCTTTACTGATCAATATCATGATCCAT
GTTAGGGGCATGCCGCTACAGAATATCTCATATTCTGTTTATACGGTGTT
TATACTGGGTTATTATATTGCCCAACGCTTATTGTCAGCCAGTTTTGACC
TAGACACGACGTCGAGTTCCTGTGGCTTCGATTGCACAGCACAGCTCAAA
CGATGTTAACTGGCATCGATAGAATCAAGGTCGCTAACCTCCTCAACCCA
GCTTCACCTCATGCTTGCCAAATTGAACACCAGAATAGTTCTTTATCACC
CAATTCTCCTGCGGGAAGCGACCAAAATGAAACACGAACGGGATGCTCGG
CTTTTGTTCCGAGCGATGAAATTAACAGTGTTTCCGACCATGTGGTAGCA
TCCGACTTGCGTGCTGTCGACAAAAGGAGTGGATACTGCATTGACGAGGA
TCCTCCTCTAGAAATGATCACCAGTTGGATTCGGTCGCATTATTGACAGG
ATAATACTAGATGCAAGCGCCCGTCGCCACCAACCACACAAGGTCTATCT
CAGCATAGCCGCCGCTAAACGCTGGTTGCTCAACCGTAGCTACGTGCTAA
GTCTTTCCACGGCCAAGAATCTTGAGAAACGGCTGCAAGAAGTGGATGTG
TTATTTTACGAAATACCATTAAATCATGGGAACCACTTCCTCGATCACGT
CTTGGCCCTGAGGGTCGCTGAGCTCATCAATGATTACCGATCTTTACTGA
TCAATATCATGATCCATGTTAGGGGCATGCCGCTACAGAATATCTCATAT
TCTGTTTATACGGTGTTTATACTGGGTTATTATATTGCCCAACGCTTATT
GTCAGCCAGTTTTGACCTAGACACGACGTCGAGTTCCTGTGGCTTCGATT
GCACAGCACAGCTCAAACGATGTTAACTGGCATCGATAGAATCAAGGTCG
CTAACCTCCTCAACCCAGCTTCACCTCATGCTTGCCAAATTGAACACCAG
AATAGTTCTTTATCACCCAATTCTCCTGCGGGAAGCGACCAAAATGAAAC
ACGAACGGGATGCTCGGCTTTTGTTCCGAGCGATGAAATTAACAGTGTTT
CCGACCATGTGGTAGCATCCGACTTGCGTGCTGTCGACAAAAGGAGTGGA
TACTGCATTGACGAGGATCCTCCTCTAGAAATGATCACCAGTTGGATTCG
GTCGCATTATTGACAGGATAATACTAGATGCAAGCGCCCGTCGCCACCAA
CCACACAAGGTCTATCTCAGCATAGCCGCCGCTAAACGCTGGTTGCTCAA
CCGTAGCTACGTGCTAAGTCTTTCCACGGCCAAGAATCTTGAGAAACGGC
TGCAAGAAGTGGATGTGTTATTTTACGAAATACCATTAAATCATGGGAAC
CACTTCCTCGATCACGTCTTGGCCCTGAGGGTCGCTGAGCTCATCAATGA
TTACCGATCTTTACTGATCAATATCATGATCCATGTTAGGGGCATGCCGC
TACAGAATATCTCATATTCTGTTTATACGGTGTTTATACTGGGTTATTAT
ATTGCCCAACGCTTATTGTCAGCCAGTTTTGACCTAGACACGACGTCGAG
TTCCTGTGGCTTCGATTGCACAGCACAGCTCAAACGATGTTAACTGGCAT
CGATAGAATCAAGGTCGCTAACCTCCTCAACCCAGCTTCACCTCATGCTT
GCCAAATTGAACACCAGAATAGTTCTTTATCACCCAATTCTCCTGCGGGA
AGCGACCAAAATGAAACACGAACGGGATGCTCGGCTTTTGTTCCGAGCGA
TGAAATTAACAGTGTTTCCGACCATGTGGTAGCATCCGACTTGCGTGCTG
TCGACAAAAGGAGTGGATACTGCATTGACGAGGATCCTCCTCTAGAAATG
ATCACCAGTTGGATTCGGTCGCATTATTGACAGGATAATACTAGATGCAA
GCGCCCGTCGCCACCAACCACACAAGGTCTATCTCAGCATAGCCGCCGCT
AAACGCTGGTTGCTCAACCGTAGCTACGTGCTAAGTCTTTCCACGGCCAA
GAATCTTGAGAAACGGCTGCAAGAAGTGGATGTGTTATTTTACGAAATAC
CATTAAATCATGGGAACCACTTCCTCGATCACGTCTTGGCCCTGAGGGTC
GCTGAGCTCATCAATGATTACCGATCTTTACTGATCAATATCATGATCCA
TGTTAGGGGCATGCCGCTACAGAATATCTCATATTCTGTTTATACGGTGT
TTATACTGGGTTATTATATTGCCCAACGCTTATTGTCAGCCAGTTTTGAC
CTAGACACGACGTCGAGTTCCTGTGGCTTCGATTGCACAGCACAGCTCAA
ACGATGTTAACTGGCATCGATAGAATCAAGGTCGCTAACCTCCTCAACCC
AGCTTCACCTCATGCTTGCCAAATTGAACACCAGAATAGTTCTTTATCAC
CCAATTCTCCTGCGGGAAGCGACCAAAATGAAACACGAACGGGATGCTCG
GCTTTTGTTCCGAGCGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009072-T1.utr3p1 | KJC3_009072-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009072-T1.utr5p1 | KJC3_009072-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4208295..4209422 - |
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