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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4253282..4257121- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009075-T2 ID=KJC3_009075-T2|Name=KJC3_009075-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3840bp|location=Sequence derived from alignment at ch6:4253282..4257121- (Aspergillus niger KJC3)
ACCCCAAGCAGACCAAACTTTCCAACTTTCTATTGATCAGTGCTCCTTAT
TTGATTTAGCTACTTTTCCTTCCTTATGTTTGAGGATCCTAGTGCGATCG
CCATGCCTAGAGAACCAATATTGAAGGGTCCTATTACCCTGAACATATCC
GAAGTGAGCGCTGAGAGCGGTGGAAAATTATTTGCAGGCTACGCAGATAA
TAGTATCAATACCACATTTCACGGTGGCAGCCATATCCACCAGCATTCTG
GTAGGGTCCCCTCTGAGAAATTTGATCTTCTTAATAATTATCGAGCCTCT
AGAACGACCCGAAACTCCTGTGAGCCCGCTATCGACTGTTCCGTATCGGA
GTGATCCAGATTTTGTCAGCCGTGACATACTCCTGGCTCAAATCCGTGAA
AAAGGCTCGGCCCCTGGGTCTAGGATAGCGCTTGTTGGCTTGGGCGGTGT
AGGGTTAGTGCAAAGCCGCCAGCGGGTAGTATATCTGCTGACAACTCGAT
TCGAAGAAAATCACAACTTGCCATAGAATATTCTCATCAAATACGACGCC
AATCGCCAGCGACATGGGTGCTCTGGATCCATGCAAGTAACGCCGCCCGA
TATGAACAAAGTTTTCGGGACATTGCAGACCAGGTGAAAATTCCGGGCCG
TCAGAATCCACAGGTCAATATCTATAAACTTGTCGAAGACTGGCTCCAAG
ACAGGAAAAGAGGTAAATGGATCCTCATTCTAGACAATGTTGACGACTAT
AAGTTCCTTACCACACCACCTACAAGCCTGGAGGATACAGTTACTAGCCA
AGCCAATGCTCCAGTCAAACCACTATTGCAATATCTCCCCCAAAGCGACA
GCGGCTCCATGATTATAACAAGTCGGTCCCAAGATATAGCATCAAAAATT
GTTTATTACAAGGAGATCATTCATGTTGCGCCTATGACCAAACCCGAGGC
CGTGGAGCTTCTACAAAAAAAAATTCAACGACAAGACGAGAGTGAAAAAG
CCGGTGATTTAGTGGTGGAACTCGAATTCATGCCACTGGCAATTATCCAG
GCAGCAGGCTATATCCATAGTCAAGGGTCCCGTTGCTCAATATCTCAGTA
CCTCGGAAAGTTTCGGGAGAGTAATAAGAGAGCAACCAAACTTCTTGAGT
ATGAACCAGGATATCACTTCCGAGACTGGGAGGCAAAGAGCTCTATTTTG
GCGACATGGCAAATATCCTTTGATTATATCCAAAAAACAAGACAGTCTGC
AGCAGACTTGCTCTCTCTGATGAGCTTTTTTGATCGACAGGGGATTCCAG
AGAACCTTCTCCGAGTGAACTGTGAGATAGAGAAAGGCTATTGGAGTTCT
GGAGAGAACGTGAATGACTTGAGTGATGAGGATACGGATGATATTTCTGA
ATCCGATGCAGATGACAGCTTTCAGTGGGACATTGCTACACTAAGACAGT
ATTCATTCATATCTGCTAGTCAGGACAATGGTATCTTGACAATGCATCGG
CTTGTGCAACTGGCTGCTCGCTCCTGGTTAAAATCGCAGGGACAACTGGA
GCAATGGAACAGACAATTCATCAGTATCCTGTGCCGGCAATTTCCGACTG
GTGAGTACCAGAATTGGGAAAAATGTCGGCTGCTCTTTCCACATGTTAGG
TCGGCAATGTCACAACAGCCAGAGTCAGACGATTTGCTGATACAATGGGC
GAAGCTGCTATACAGAGGTGCATGGTATGCAGCTGAAAGTGGTAACATTG
TGGCTGAGACAGAAATGGCATCAAAATCAAGGAAACAAAGAAAAAGGATA
TTAGGAATAGATGATGAAGACACACTTGCGAGCACTCTGATGTTAGCAAA
TGCATACAGCTGGTACGGGCACTGGAAGAAGGCCGAGCAGCTCCAGGTGC
AGGTAATGGAGACTCGCAAGATAAAGCTTGGCGAGGACCACCCCGACACA
CTGACCAGTATGGCCTACCTGGCATCAACATACAGGAACCAGGGCCGGTG
GGAGAAGGCCGAGCAGCTTGAGGTCCAGGTGATGGAGATGCGCAAGATAA
AGTTTGGCGAGGACCACCCCGGCACGCTGGCCAGTATGGCCAACCTGGCA
TTAACATTTTGGAACCAGGGCCAGTGGGAGAGGGCCGAACAGCTTCAGAT
GCAGGTGATGGAGACAAGCAAGATAAAGCTTGGCGAGGACCATCCCAACA
CGCTGACCAGTATAGCCAACCTGGCATCAACATACAGGGACCAGGGCCGG
TGGGAGAAGGCTGAGCAGCTTGAGGTGCAGGTGATGGAGACAAGCAAGAT
GAAGCTTGGCGAGGACCACCCCAATACGCTGATCAGTATGGCCAACCTGG
CATCAATATTTTTGAACCAGGGCCGGTGGGAGAAGGCCGAGCAGCTTTTA
ATGCAGGTGATGGAGACGAGTAAGATAAAGCTTGGCGAGGACCACCCCAA
TACGCTGATCAGTATGGCCAACCTGGCATCAACATACAGGAACCAGGGCC
GGTGGGAGAAGGCCGAGCAGCTTGAGGTCCAGGTGATGGAGATGCATAAT
ATAAAGCTTGGCAAGGACCACCCCAACACGCTGACCAGTATGGCCAACCT
GGCATCAACATACAGGAACCAGGGCCGGTGGGAGAAGGCCGAACAGCTTC
AGATGCAGGTGATGGAGACAAGCAAGATAAAGCTTGGCGAGGACCACCCT
AATACGCTGATCAGTATGGCCAACCTGGCATCAACATACAGGAACCAGGG
CCGGTGGGAGAAGGCTGAGCAGCTTGAGGTCCAGGTGATGGAGATGCGCA
AGATAAAGCTTGGCGAGGACCACCCCAACACACTGACCAGTATGGCTAAC
CTGGCATCAATATACAGGGACCAGGGCCGGTCGGAGAAGGCCGAGCAGCT
TAACGTACAGGTGATGGAGACAAGCAAGATAAAGCTTGGCGAGGACCACC
CCAGCACGCTGAGCATTATAGCCAATCTGGCATCAATATACCGGGACCAG
GGCCGGTGGGAGAAGGCCGAGCAGCTTGAGGTCCAGGTGATGGAGACAAG
CAAGATAAAGCTTGGCGAGGACCACCCCGACACGCTGATCAGTATGGCCA
ACCTAGCATCAACATACAGGAACCAGGGCCGGTGGGAGAAGGCCGAGCAG
CTCCAGATACAGGTAATGGAGACTCGCAAGATAAAGCTTGGCGAGGACCA
CCCCGACACACTGACCAGTATGGCCTACCTGGCATCAACATACAGGAACC
AGGGCCGGTGGGAGAAGGCCGAGCAGCTTGAGGTCCAGGTGATGGAGATG
CGCAAGATAAAGTTTGGCGAGGACCACCCCGGCACGCTGGCCAGTATGGC
CAACCTGGCATTAACATTTTGGAACCAGGGCCAGTGGGAGAGGGCCGAAC
AGCTTTTAATGCAGGTGATGGAGACAAGCAAGATAAAGCTTGGCGAGGAC
CACCCCGGCACGCTGACCATTATGGCCAATCTTGCTTTTACCTGGAAATC
TTCTGGTCAGTATGCTGCTGCTCTTGAGTTACTCAAAGTGTCATTAGCGA
AGCAGAAACAAGTTCTAGGACTTGATCATCCCGACGTTTCGTCAAATCTA
CAGACCTTGCAGCAATGGGAGACCGAGGAATTAGGTACCAACAGGTAAAC
TGGAAGGATTCCATTTGATCTGTTTGACGTGTTCGTTATGTTTGTTCTCT
AAAGCTTTCTGCAGCAGAGACAGTTGCCTTATTTTCTCTTTTCTTTTCTT
TCCTTAGTTTAGTATTCTAGTTTTTCACGCAACGAATGGAATAAAGAGAT
CACTCCCTGAGACCCTCACATTAATCATGAACATGTCAGG back to topCoding sequence (CDS) from alignment at ch6:4253282..4257121- >KJC3_009075-T2 ID=KJC3_009075-T2|Name=KJC3_009075-T2|organism=Aspergillus niger KJC3|type=CDS|length=3060bp|location=Sequence derived from alignment at ch6:4253282..4257121- (Aspergillus niger KJC3)
GTGATGGAGACAAGCAAGATAAAGCTTGGCGAGGACCACCCCGGCACGCT
GACCATTATGGCCAATCTTGCTTTTACCTGGAAATCTTCTGGTCAGTATG
CTGCTGCTCTTGAGTTACTCAAAGTGTCATTAGCGAAGCAGAAACAAGTT
CTAGGACTTGATCATCCCGACGTTTCGTCAAATCTACAGACCTTGCAGCA
ATGGGAGACCGAGGAATTAGGTACCAACAGGTAAATGATTATAACAAGTC
GGTCCCAAGATATAGCATCAAAAATTGTTTATTACAAGGAGATCATTCAT
GTTGCGCCTATGACCAAACCCGAGGCCGTGGAGCTTCTACAAAAAAAAAT
TCAACGACAAGACGAGAGTGAAAAAGCCGGTGATTTAGTGGTGGAACTCG
AATTCATGCCACTGGCAATTATCCAGGCAGCAGGCTATATCCATAGTCAA
GGGTCCCGTTGCTCAATATCTCAGTACCTCGGAAAGTTTCGGGAGAGTAA
TAAGAGAGCAACCAAACTTCTTGAGTATGAACCAGGATATCACTTCCGAG
ACTGGGAGGCAAAGAGCTCTATTTTGGCGACATGGCAAATATCCTTTGAT
TATATCCAAAAAACAAGACAGTCTGCAGCAGACTTGCTCTCTCTGATGAG
CTTTTTTGATCGACAGGGGATTCCAGAGAACCTTCTCCGAGTGAACTGTG
AGATAGAGAAAGGCTATTGGAGTTCTGGAGAGAACGTGAATGACTTGAGT
GATGAGGATACGGATGATATTTCTGAATCCGATGCAGATGACAGCTTTCA
GTGGGACATTGCTACACTAAGACAGTATTCATTCATATCTGCTAGTCAGG
ACAATGGTATCTTGACAATGCATCGGCTTGTGCAACTGGCTGCTCGCTCC
TGGTTAAAATCGCAGGGACAACTGGAGCAATGGAACAGACAATTCATCAG
TATCCTGTGCCGGCAATTTCCGACTGGTGAGTACCAGAATTGGGAAAAAT
GTCGGCTGCTCTTTCCACATGTTAGGTCGGCAATGTCACAACAGCCAGAG
TCAGACGATTTGCTGATACAATGGGCGAAGCTGCTATACAGAGGTGCATG
GTATGCAGCTGAAAGTGGTAACATTGTGGCTGAGACAGAAATGGCATCAA
AATCAAGGAAACAAAGAAAAAGGATATTAGGAATAGATGATGAAGACACA
CTTGCGAGCACTCTGATGTTAGCAAATGCATACAGCTGGTACGGGCACTG
GAAGAAGGCCGAGCAGCTCCAGGTGCAGGTAATGGAGACTCGCAAGATAA
AGCTTGGCGAGGACCACCCCGACACACTGACCAGTATGGCCTACCTGGCA
TCAACATACAGGAACCAGGGCCGGTGGGAGAAGGCCGAGCAGCTTGAGGT
CCAGGTGATGGAGATGCGCAAGATAAAGTTTGGCGAGGACCACCCCGGCA
CGCTGGCCAGTATGGCCAACCTGGCATTAACATTTTGGAACCAGGGCCAG
TGGGAGAGGGCCGAACAGCTTCAGATGCAGGTGATGGAGACAAGCAAGAT
AAAGCTTGGCGAGGACCACCCCGGCACGCTGACCATTATGGCCAATCTTG
CTTTTACCTGGAAATCTTCTGGTCAGTATGCTGCTGCTCTTGAGTTACTC
AAAGTGTCATTAGCGAAGCAGAAACAAGTTCTAGGACTTGATCATCCCGA
CGTTTCGTCAAATCTACAGACCTTGCAGCAATGGGAGACCGAGGAATTAG
GTACCAACAGGTAAATGATTATAACAAGTCGGTCCCAAGATATAGCATCA
AAAATTGTTTATTACAAGGAGATCATTCATGTTGCGCCTATGACCAAACC
CGAGGCCGTGGAGCTTCTACAAAAAAAAATTCAACGACAAGACGAGAGTG
AAAAAGCCGGTGATTTAGTGGTGGAACTCGAATTCATGCCACTGGCAATT
ATCCAGGCAGCAGGCTATATCCATAGTCAAGGGTCCCGTTGCTCAATATC
TCAGTACCTCGGAAAGTTTCGGGAGAGTAATAAGAGAGCAACCAAACTTC
TTGAGTATGAACCAGGATATCACTTCCGAGACTGGGAGGCAAAGAGCTCT
ATTTTGGCGACATGGCAAATATCCTTTGATTATATCCAAAAAACAAGACA
GTCTGCAGCAGACTTGCTCTCTCTGATGAGCTTTTTTGATCGACAGGGGA
TTCCAGAGAACCTTCTCCGAGTGAACTGTGAGATAGAGAAAGGCTATTGG
AGTTCTGGAGAGAACGTGAATGACTTGAGTGATGAGGATACGGATGATAT
TTCTGAATCCGATGCAGATGACAGCTTTCAGTGGGACATTGCTACACTAA
GACAGTATTCATTCATATCTGCTAGTCAGGACAATGGTATCTTGACAATG
CATCGGCTTGTGCAACTGGCTGCTCGCTCCTGGTTAAAATCGCAGGGACA
ACTGGAGCAATGGAACAGACAATTCATCAGTATCCTGTGCCGGCAATTTC
CGACTGGTGAGTACCAGAATTGGGAAAAATGTCGGCTGCTCTTTCCACAT
GTTAGGTCGGCAATGTCACAACAGCCAGAGTCAGACGATTTGCTGATACA
ATGGGCGAAGCTGCTATACAGAGGTGCATGGTATGCAGCTGAAAGTGGTA
ACATTGTGGCTGAGACAGAAATGGCATCAAAATCAAGGAAACAAAGAAAA
AGGATATTAGGAATAGATGATGAAGACACACTTGCGAGCACTCTGATGTT
AGCAAATGCATACAGCTGGTACGGGCACTGGAAGAAGGCCGAGCAGCTCC
AGGTGCAGGTAATGGAGACTCGCAAGATAAAGCTTGGCGAGGACCACCCC
GACACACTGACCAGTATGGCCTACCTGGCATCAACATACAGGAACCAGGG
CCGGTGGGAGAAGGCCGAGCAGCTTGAGGTCCAGGTGATGGAGATGCGCA
AGATAAAGTTTGGCGAGGACCACCCCGGCACGCTGGCCAGTATGGCCAAC
CTGGCATTAACATTTTGGAACCAGGGCCAGTGGGAGAGGGCCGAACAGCT
TCAGATGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009075-T2.utr3p1 | KJC3_009075-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR011990 |
| DBxref | PFAM:PF13176 |
| DBxref | PFAM:PF13424 |
| DBxref | PFAM:PF13374 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4253282..4257121 - |
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