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KJC3_009076-T1, KJC3_009076-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009076-T1
Unique NameKJC3_009076-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4257342..4258796+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009076-T1 ID=KJC3_009076-T1|Name=KJC3_009076-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1455bp|location=Sequence derived from alignment at ch6:4257342..4258796+ (Aspergillus niger KJC3)
CGCGTGATCAAATAGCGGGGTAGGCCAAGATTCTTAGTCCGCGGCAATTG
AGAATGTGTCTTGCGATGTCCCGGAACAAAACGACTTCTCACCTCAGGAA
TTTTTCGCGTTGATTGATTTTTGATCATTCAGTATAATTAATCCAAAACA
TAATCCTAAACTTCATTGATCCTTCCTAGCAAGGTTTCTTCATCTGATCG
TATTTCGACCATGGATCCGTTCAGCGTGGCTCTTGGTACTCTAAGTATCG
CCCAAGCAGCGTTACAGAGTATAAATACTCTGATCTATGCTATCAACGCG
ATCAAAGATGCGCCTAGCGTCATTGTTGAGCTAAAGAATGAGCTGGCAGC
AGTGAACGCGATCAAAGATGCGCCTAGCGTCATTGTTGAGCTAAAGAATG
AGCTGGCAGCAGTGAACGCGATCCTTATCGCTTTGAACGATGCGCAAAGG
GATAAAAAGCTTGAAGCACTCACACTCGAAGCAAAGACTGCGTTGCAATT
AGCCATTACCAATTGCGCAAGGGCCTGTGACAACTTTAGTACGAAGCTGA
AGCAGTGGACAAAACAGTCAAATGAAAAAATTCACTGGTGGGATCGTGTT
CGTATTGGTCTTTTTGCGGAGGCGACAATCGAAGCTCTCAGCAAGCAGCT
CAGCTGCTGCAAATCTACTATGAGCACGGCAGTCAGCACGGCAGTCTTGT
ATGTACTTAATGACGCACACGCGCAGCTCCAAATTACTGCCCGCGTTATG
CTTACCTGGTTGATAGATTGACAACAGCTACATCAACCTCAATTAATAAT
ACGATGCAAAGCGGGCTCCGAGAGAAGGAAATCACAATCTCCCAGAAAAT
GATAGAGATAGATGAACAGAATACGGAGACGGAGAAGGCACTGCAACAGG
TCAATACTGCACAGTATACAGACGATAGCGATCCTTCCGGGCTTATTGAA
CAACTTCAAGACCAACGTATAACACTCGATCTTTCGCGGAAGTTTCTGGA
AAACTTACTATCAGAAGCTCATCACATACGCACCGGGCAAAAGATCACCA
AAATTGATATGAGTATTGGGGGAAAGCTCCTTGTTGGCCTCATTAACTAC
GAAAGTAGCCGTGAAGAGGTCCGTCAGGAGATCCATGATGTTAAGGCCAC
GAGTCACGGCAAAGGCGTTGTGGGGATGGTGAAGGGGTTTGATGTAAATA
GTTTTTTTAAGGATTAGGGGGATAAGTGTCAGGTCCAAACCAACTTCGCT
CTGCCATACAAATTACCATGGGGAACCGAAGTGATGAACCTGAAGTCTGA
TTTCTAGAACGACTGAGCGCTTGAGACCTACATAACAGTAACGACACGTA
AACCCCTGTGGATCGGGTGATGTCAGTTGACCATCTCGGATAGACGCTTA
GACGGTCCCAATAACGCTCATATCGCCTAACAGTAAGCATTGTGAAGACG
AGGAG
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Coding sequence (CDS) from alignment at ch6:4257342..4258796+

>KJC3_009076-T1 ID=KJC3_009076-T1|Name=KJC3_009076-T1|organism=Aspergillus niger KJC3|type=CDS|length=1878bp|location=Sequence derived from alignment at ch6:4257342..4258796+ (Aspergillus niger KJC3)
ATGGATCCGTTCAGCGTGGCTCTTGGTACTCTAAGTATCGCCCAAGCAGC
GTTACAGAGTATAAATACTCTGATCTATGCTATCAACGCGATCAAAGATG
CGCCTAGCGTCATTGTTGAGCTAAAGAATGAGCTGGCAGCAGTGAACGCG
ATCAAAGATGCGCCTAGCGTCATTGTTGAGCTAAAGAATGAGCTGGCAGC
AGTGAACGCGATCCTTATCGCTTTGAACGATGCGCAAAGGGATAAAAAGC
TTGAAGCACTCACACTCGAAGCAAAGACTGCGTTGCAATTAGCCATTACC
AATTGCGCAAGGGCCTGTGACAACTTTAGTACGAAGCTGAAGCAGTGGAC
AAAACAGTCAAATGAAAAAATTCACTGGTGGGATCGTGTTCGTATTGGTC
TTTTTGCGGAGGCGACAATCGAAGCTCTCAGCAAGCAGCTCAGCTGCTGC
AAATCTACTATGAGCACGGCAGTCAGCACGGCAGTCTTATTGACAACAGC
TACATCAACCTCAATTAATAATACGATGCAAAGCGGGCTCCGAGAGAAGG
AAATCACAATCTCCCAGAAAATGATAGAGATAGATGAACAGAATACGGAG
ACGGAGAAGGCACTGCAACAGGTCAATACTGCACAGTATACAGACGATAG
CGATCCTTCCGGGCTTATTGAACAACTTCAAGACCAACGTATAACACTCG
ATCTTTCGCGGAAGTTTCTGGAAAACTTACTATCAGAAGCTCATCACATA
CGCACCGGGCAAAAGATCACCAAAATTGATATGAGTATTGGGGGAAAGCT
CCTTGTTGGCCTCATTAACTACGAAAGTAGCCGTGAAGAGGTCCGTCAGG
AGATCCATGATGTTAAGGCCACGAGTCACGGCAAAGGCGTTGTGGGGATG
GTGAAGGGGTTTGATGTAAATAGTTTTTTTAAGGATTAGATGGATCCGTT
CAGCGTGGCTCTTGGTACTCTAAGTATCGCCCAAGCAGCGTTACAGAGTA
TAAATACTCTGATCTATGCTATCAACGCGATCAAAGATGCGCCTAGCGTC
ATTGTTGAGCTAAAGAATGAGCTGGCAGCAGTGAACGCGATCAAAGATGC
GCCTAGCGTCATTGTTGAGCTAAAGAATGAGCTGGCAGCAGTGAACGCGA
TCCTTATCGCTTTGAACGATGCGCAAAGGGATAAAAAGCTTGAAGCACTC
ACACTCGAAGCAAAGACTGCGTTGCAATTAGCCATTACCAATTGCGCAAG
GGCCTGTGACAACTTTAGTACGAAGCTGAAGCAGTGGACAAAACAGTCAA
ATGAAAAAATTCACTGGTGGGATCGTGTTCGTATTGGTCTTTTTGCGGAG
GCGACAATCGAAGCTCTCAGCAAGCAGCTCAGCTGCTGCAAATCTACTAT
GAGCACGGCAGTCAGCACGGCAGTCTTATTGACAACAGCTACATCAACCT
CAATTAATAATACGATGCAAAGCGGGCTCCGAGAGAAGGAAATCACAATC
TCCCAGAAAATGATAGAGATAGATGAACAGAATACGGAGACGGAGAAGGC
ACTGCAACAGGTCAATACTGCACAGTATACAGACGATAGCGATCCTTCCG
GGCTTATTGAACAACTTCAAGACCAACGTATAACACTCGATCTTTCGCGG
AAGTTTCTGGAAAACTTACTATCAGAAGCTCATCACATACGCACCGGGCA
AAAGATCACCAAAATTGATATGAGTATTGGGGGAAAGCTCCTTGTTGGCC
TCATTAACTACGAAAGTAGCCGTGAAGAGGTCCGTCAGGAGATCCATGAT
GTTAAGGCCACGAGTCACGGCAAAGGCGTTGTGGGGATGGTGAAGGGGTT
TGATGTAAATAGTTTTTTTAAGGATTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009076KJC3_009076Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009076-T1.utr5p1KJC3_009076-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009076-T1.exon1KJC3_009076-T1.exon1Aspergillus niger KJC3exon
KJC3_009076-T1.exon2KJC3_009076-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009076-T1.cdsKJC3_009076-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009076-T1.utr3p1KJC3_009076-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009076-T1KJC3_009076-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR031348
DBxrefPFAM:PF17111
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4257342..4258796 +
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