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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4337689..4341153- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009084-T1 ID=KJC3_009084-T1|Name=KJC3_009084-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3465bp|location=Sequence derived from alignment at ch6:4337689..4341153- (Aspergillus niger KJC3)
GGCACTCCAGCGGGCGAAGAGGCTCGTCAACGCGATGGGTCATCGCATGG
ATCTAGCCCGCGAACTGCAGAACCCCGGTCACACGAACTGGAACCCAATG
GATTTCCCCGAGTCATTGCTGCTAGAGATTGAGAGTGGGGTGTTGATTCG
GGACGTCCAGGAACAGATCGCGCGACGCATGCGAAATGCGCAGCCCGGAC
AGAATGTCATCATGCAACTGAATATGGGCGAGGGCAAGTCTTCCGTCATC
GTCCCCATCGTGGCAGCCGCGCTCGCAGACCGTTCATGCCTAGTTCGCAT
CATTGTTTCTAAGCCCCAGTCGCGTCAGATGTTTCAGATGCTCGTTTCGA
AGCTGGGGTGCCTTTTAGGGCGGCGGGTGTATCATCTCCCCGTGTCACGC
TCGTTGCAGATCGGGGAACCGGAGGCGGAAGAGATCGAATGGATATGCCA
CGACTGCATGGCGGAGGGCGGAGTTCTCCTCGTTCAGCCCGAGCACCTCT
TATCCCTGAAGCTGATGTGTCTCGAGTGCTTTATCACAGGGAGAGAGGCG
GTTGGTGTATGTCTTCTGCGAATTCTGGATTTCTTCAGGACCTCCTCGCG
AGACGTAGTGGATGAAAGCGATGAGAACTTCAGTGTGAAGTTCGAGCTGA
TCTACACGATGGGGACCCAGCGTCCGTTGGAGCTCAGTCCGCAGAGGTGG
ACTTTAATGCAAGAGATGCTCGGCCTGGTGAGGAAGTATGCTCCAGTTAT
CAAGATGCAGTTCCCGCGGTCAATTGAGGTGGAGGAGCCGCATCCAGGAT
GTTTCCCCAGGATACGGTTGCTCCGAGCGGATGCCGTCCATCAGCTGTTT
GAACGGATTGCGGATCATATTTTCCATAACGGTATTGACAAACTGCCAAT
TCCAAGGCAGCCAGAAGCACAACGACGCGCGGCGATCGCTTATTGCCTTA
ACACTGACCCGTTACCACTGCAGATTGCTGCAGTTGAAACCCCAGATGCG
TCTGGCTTAGGGAACGACAGCACGAGGGATCCTCTGCTACTACTCCGGGG
TCTGCTGGCTGGCAACGTTCTGGCATTCTGCCTGGGACAAAGACGCTGGC
GAGTCAACTATGGACTTGATCGCTGCCGACAACCCCCCACAAGGCTGGCA
GTTCCGTATCGTGCCAAGGATAATCCGGCACCACGGGCGGAATTCAGTCA
TCCCGATGTTGTCATTGTACTGACGTGCCTGAGCTATTACTATGAGGGAC
TCCGCGACGAGGACCTATTCCGAGCATTCGACCATCTGGTCGGATCGGAT
CAAGCTGACTCGGAGTATCAAATATGGGTCGATGATGCCCCGACTCTCCC
CCCGGCCTATCGTCAATTGCTGGGCGCTAATCTTCAGGACCGGCTCCATT
GCGTGGAATGCATTTTCCCCTGTCTTCGGTTCGCGAAGGGAGCCATCGAT
TACTTCCTGGCTCATATTATTTTCACCAAAGGCCTAAGGGAGTTTCCGAG
TAAATTATCTTCGTCCGGATGGGATATCGGTGAGGTCAAGTGCCATCCCA
CCGTCGGCTTTAGCGGGACCAACGATTCCCGTGTCACCCTTCCGCTCAGT
GTGGAGCAGCTGGATCTACCTGACCAGAACCACACCAATGCGTTAGTTCT
CGAATATCTTCTCCGACCCGAGACTGGCATTGCCCTGATTCCGACCCGAG
ATGACCTGTCCAAGTCAGATGCGCAGGTCCTTCTGGATATGGTGGCGGAA
CTGGGTTCACCCGTACGCGTGATTCTGGACGTTGAAGCTCGCATATTAGA
GCTGAGTAACCTGGATGTTGCGAAGACCTGGTTGGAGATGGTCAGTAATG
ATGGTCGAACGCAGGCTGTGGTCTTTATCAACGACGACGACGATATCGCC
GTGGTAGATCGGACCGGACTCGTCGAACCGCTGCAGACGTCACCTTTCAA
AAGGCACCTCGATCTATGCCTTGTGTTCCTTGACGAAGCACATACGAGAG
GGATTGATCTGAAGCTACCCCTGAATTACCGGGCGGCGGTGACGCTGGGA
CCGAACATCACAAAAGACAAGCTGGTTCAAGGTCAGGGACCCCCGCTGGA
ACAGTCATATGCACTTCTCACTAACGGCTATTCACAGCATGCATGAGAAT
GAGAAATTTAGGGAGAGGACAATCGGTCGTGTTTTGCGTACCGGAAGAGA
TCAAGTTCAAGATTCTGACCCTCTGTGGGAGGACCCACCATTCTGAACTT
ACCGTAGCAGAAGTGCTTTGCTGGGCAATGTCAGAGACTTGGGACGATAT
GCAACGCAGCATACCTTTGTGGGCAGTGCAGGGAAACCGATATCAGGCCC
AGGCCCGTCAGTGGCTGGTTCTGCGACAGGACGGGCAAACCTCGATATCA
ACATCTAAGGCAGAGGGATTTCTGGAACCGGAATCCCAGTCCCTTGAACG
GCGGTATAGACCCGGTTGTAATAATGTCCTTTCTCTTTCTTCCAAATGCC
CTGACGATGCGGACTCGCGGCGCATATTGGACCGATGCCGTGAGTTTGCA
ACTGTGAAGTTCTCTGCAGCGCAACTCCAGGAAGAGCAGGAGCGAGAACT
AGCACCAGAGATTGAGCAGGAACGACAAGTTCAACGTCCGGCTCCTGCCG
AACCGGAAACGCATTTTGTACATCCTGATATACTCTCGTTCGTGGCCACT
GGACTCCTGGATGCATCATCCGCCGCCGTGAAACCAGCTTTTATGGTGTT
AAAAGATACATCAGCGGCAAGATACCTGGATGTGGCCCAGTTCCCATCGG
AGCTCCTTGTCACCATTGATTTTGCGAGAACAGTCCGACTGCCTAAATTA
TCTGCCCGGGATAGTTATCAGCGTGCGGTGGAATGGGTCCTGATGAGCAC
CGGCCATCCCTCCGAGGACGGAAAGCCCGTAGGGCACATGGTGATCATCA
GCCCGTATGAAGCGGACAAACTTCATGCTGACATTCGCGGGTCTAGCGCA
GTAACGCTGCATGTATACGCACCTCGGCAGAACCAAAGTTCGTATCCTAT
CGATAAGCTCGATCTGTACACGATTCCGAAAAAATTAAGCACAAGGCCCC
GGCGAGTCCCTGAGAGCCTACGCATTCAACTGAACCTCTTTGCGGGCCAG
CTCTATATTTCGTCGTACAACGAGTATTGTGAGATATGCCGCTTTCTGGG
AGTTGCGTTTACTGCCGCACCAGAGGGCTTGGTTGTCGCCGCGGATGGGT
TCATCGTGGAGAGCCAACAGGCAGGAGCCAAGTTCACCCAAAGCCCCCTC
AGGTTTCTCAAGGTGTTCATGTCACGGATACGGAAGGACGGGCAGGAAAT
TGACAAGACCCACCTTGGGAAGATCCCAGACGGAAAACTCTTACTCATGG
CGGACTTCCAAGATTTCAATGGCAGAGCTAGGACCATGCAGCTGAGCCTT
CAAAATGCCCGATGA back to topCoding sequence (CDS) from alignment at ch6:4337689..4341153- >KJC3_009084-T1 ID=KJC3_009084-T1|Name=KJC3_009084-T1|organism=Aspergillus niger KJC3|type=CDS|length=6750bp|location=Sequence derived from alignment at ch6:4337689..4341153- (Aspergillus niger KJC3)
CATGCATGAGAATGAGAAATTTAGGGAGAGGACAATCGGTCGTGTTTTGC
GTACCGGAAGAGATCAAGTTCAAGATTCTGACCCTCTGTGGGAGGACCCA
CCATTCTGAACTTACCGTAGCAGAAGTGCTTTGCTGGGCAATGTCAGAGA
CTTGGGACGATATGCAACGCAGCATACCTTTGTGGGCAGTGCAGGGAAAC
CGATATCAGGCCCAGGCCCGTCAGTGGCTGGTTCTGCGACAGGACGGGCA
AACCTCGATATCAACATCTAAGGCAGAGGGATTTCTGGAACCGGAATCCC
AGTCCCTTGAACGGCGGTATAGACCCGGTTGTAATAATGTCCTTTCTCTT
TCTTCCAAATGCCCTGACGATGCGGACTCGCGGCGCATATTGGACCGATG
CCGTGAGTTTGCAACTGTGAAGTTCTCTGCAGCGCAACTCCAGGAAGAGC
AGGAGCGAGAACTAGCACCAGAGATTGAGCAGGAACGACAAGTTCAACGT
CCGGCTCCTGCCGAACCGGAAACGCATTTTGTACATCCTGATATACTCTC
GTTCGTGGCCACTGGACTCCTGGATGCATCATCCGCCGCCGTGAAACCAG
CTTTTATGGTGTTAAAAGATACATCAGCGGCAAGATACCTGGATGTGGCC
CAGTTCCCATCGGAGCTCCTTGTCACCATTGATTTTGCGAGAACAGTCCG
ACTGCCTAAATTATCTGCCCGGGATAGTTATCAGCGTGCGGTGGAATGGG
TCCTGATGAGCACCGGCCATCCCTCCGAGGACGGAAAGCCCGTAGGGCAC
ATGGTGATCATCAGCCCGTATGAAGCGGACAAACTTCATGCTGACATTCG
CGGGTCTAGCGCAGTAACGCTGCATGTATACGCACCTCGGCAGAACCAAA
GTTCGTATCCTATCGATAAGCTCGATCTGTACACGATTCCGAAAAAATTA
AGCACAAGGCCCCGGCGAGTCCCTGAGAGCCTACGCATTCAACTGAACCT
CTTTGCGGGCCAGCTCTATATTTCGTCGTACAACGAGTATTGTGAGATAT
GCCGCTTTCTGGGAGTTGCGTTTACTGCCGCACCAGAGGGCTTGGTTGTC
GCCGCGGATGGGTTCATCGTGGAGAGCCAACAGGCAGGAGCCAAGTTCAC
CCAAAGCCCCCTCAGGTTTCTCAAGGTGTTCATGTCACGGATACGGAAGG
ACGGGCAGGAAATTGACAAGACCCACCTTGGGAAGATCCCAGACGGAAAA
CTCTTACTCATGGCGGACTTCCAAGATTTCAATGGCAGAGCTAGGACCAT
GCAGCTGAGCCTTCAAAATGCCCGATGAATGGGTCATCGCATGGATCTAG
CCCGCGAACTGCAGAACCCCGGTCACACGAACTGGAACCCAATGGATTTC
CCCGAGTCATTGCTGCTAGAGATTGAGAGTGGGGTGTTGATTCGGGACGT
CCAGGAACAGATCGCGCGACGCATGCGAAATGCGCAGCCCGGACAGAATG
TCATCATGCAACTGAATATGGGCGAGGGCAAGTCTTCCGTCATCGTCCCC
ATCGTGGCAGCCGCGCTCGCAGACCGTTCATGCCTAGTTCGCATCATTGT
TTCTAAGCCCCAGTCGCGTCAGATGTTTCAGATGCTCGTTTCGAAGCTGG
GGTGCCTTTTAGGGCGGCGGGTGTATCATCTCCCCGTGTCACGCTCGTTG
CAGATCGGGGAACCGGAGGCGGAAGAGATCGAATGGATATGCCACGACTG
CATGGCGGAGGGCGGAGTTCTCCTCGTTCAGCCCGAGCACCTCTTATCCC
TGAAGCTGATGTGTCTCGAGTGCTTTATCACAGGGAGAGAGGCGGTTGGT
GTATGTCTTCTGCGAATTCTGGATTTCTTCAGGACCTCCTCGCGAGACGT
AGTGGATGAAAGCGATGAGAACTTCAGTGTGAAGTTCGAGCTGATCTACA
CGATGGGGACCCAGCGTCCGTTGGAGCTCAGTCCGCAGAGGTGGACTTTA
ATGCAAGAGATGCTCGGCCTGGTGAGGAAGTATGCTCCAGTTATCAAGAT
GCAGTTCCCGCGGTCAATTGAGGTGGAGGAGCCGCATCCAGGATGTTTCC
CCAGGATACGGTTGCTCCGAGCGGATGCCGTCCATCAGCTGTTTGAACGG
ATTGCGGATCATATTTTCCATAACGGTATTGACAAACTGCCAATTCCAAG
GCAGCCAGAAGCACAACGACGCGCGGCGATCGCTTATTGCCTTAACACTG
ACCCGTTACCACTGCAGATTGCTGCAGTTGAAACCCCAGATGCGTCTGGC
TTAGGGAACGACAGCACGAGGGATCCTCTGCTACTACTCCGGGGTCTGCT
GGCTGGCAACGTTCTGGCATTCTGCCTGGGACAAAGACGCTGGCGAGTCA
ACTATGGACTTGATCGCTGCCGACAACCCCCCACAAGGCTGGCAGTTCCG
TATCGTGCCAAGGATAATCCGGCACCACGGGCGGAATTCAGTCATCCCGA
TGTTGTCATTGTACTGACGTGCCTGAGCTATTACTATGAGGGACTCCGCG
ACGAGGACCTATTCCGAGCATTCGACCATCTGGTCGGATCGGATCAAGCT
GACTCGGAGTATCAAATATGGGTCGATGATGCCCCGACTCTCCCCCCGGC
CTATCGTCAATTGCTGGGCGCTAATCTTCAGGACCGGCTCCATTGCGTGG
AATGCATTTTCCCCTGTCTTCGGTTCGCGAAGGGAGCCATCGATTACTTC
CTGGCTCATATTATTTTCACCAAAGGCCTAAGGGAGTTTCCGAGTAAATT
ATCTTCGTCCGGATGGGATATCGGTGAGGTCAAGTGCCATCCCACCGTCG
GCTTTAGCGGGACCAACGATTCCCGTGTCACCCTTCCGCTCAGTGTGGAG
CAGCTGGATCTACCTGACCAGAACCACACCAATGCGTTAGTTCTCGAATA
TCTTCTCCGACCCGAGACTGGCATTGCCCTGATTCCGACCCGAGATGACC
TGTCCAAGTCAGATGCGCAGGTCCTTCTGGATATGGTGGCGGAACTGGGT
TCACCCGTACGCGTGATTCTGGACGTTGAAGCTCGCATATTAGAGCTGAG
TAACCTGGATGTTGCGAAGACCTGGTTGGAGATGGTCAGTAATGATGGTC
GAACGCAGGCTGTGGTCTTTATCAACGACGACGACGATATCGCCGTGGTA
GATCGGACCGGACTCGTCGAACCGCTGCAGACGTCACCTTTCAAAAGGCA
CCTCGATCTATGCCTTGTGTTCCTTGACGAAGCACATACGAGAGGGATTG
ATCTGAAGCTACCCCTGAATTACCGGGCGGCGGTGACGCTGGGACCGAAC
ATCACAAAAGACAAGCTGGTTCAAGCATGCATGAGAATGAGAAATTTAGG
GAGAGGACAATCGGTCGTGTTTTGCGTACCGGAAGAGATCAAGTTCAAGA
TTCTGACCCTCTGTGGGAGGACCCACCATTCTGAACTTACCGTAGCAGAA
GTGCTTTGCTGGGCAATGTCAGAGACTTGGGACGATATGCAACGCAGCAT
ACCTTTGTGGGCAGTGCAGGGAAACCGATATCAGGCCCAGGCCCGTCAGT
GGCTGGTTCTGCGACAGGACGGGCAAACCTCGATATCAACATCTAAGGCA
GAGGGATTTCTGGAACCGGAATCCCAGTCCCTTGAACGGCGGTATAGACC
CGGTTGTAATAATGTCCTTTCTCTTTCTTCCAAATGCCCTGACGATGCGG
ACTCGCGGCGCATATTGGACCGATGCCGTGAGTTTGCAACTGTGAAGTTC
TCTGCAGCGCAACTCCAGGAAGAGCAGGAGCGAGAACTAGCACCAGAGAT
TGAGCAGGAACGACAAGTTCAACGTCCGGCTCCTGCCGAACCGGAAACGC
ATTTTGTACATCCTGATATACTCTCGTTCGTGGCCACTGGACTCCTGGAT
GCATCATCCGCCGCCGTGAAACCAGCTTTTATGGTGTTAAAAGATACATC
AGCGGCAAGATACCTGGATGTGGCCCAGTTCCCATCGGAGCTCCTTGTCA
CCATTGATTTTGCGAGAACAGTCCGACTGCCTAAATTATCTGCCCGGGAT
AGTTATCAGCGTGCGGTGGAATGGGTCCTGATGAGCACCGGCCATCCCTC
CGAGGACGGAAAGCCCGTAGGGCACATGGTGATCATCAGCCCGTATGAAG
CGGACAAACTTCATGCTGACATTCGCGGGTCTAGCGCAGTAACGCTGCAT
GTATACGCACCTCGGCAGAACCAAAGTTCGTATCCTATCGATAAGCTCGA
TCTGTACACGATTCCGAAAAAATTAAGCACAAGGCCCCGGCGAGTCCCTG
AGAGCCTACGCATTCAACTGAACCTCTTTGCGGGCCAGCTCTATATTTCG
TCGTACAACGAGTATTGTGAGATATGCCGCTTTCTGGGAGTTGCGTTTAC
TGCCGCACCAGAGGGCTTGGTTGTCGCCGCGGATGGGTTCATCGTGGAGA
GCCAACAGGCAGGAGCCAAGTTCACCCAAAGCCCCCTCAGGTTTCTCAAG
GTGTTCATGTCACGGATACGGAAGGACGGGCAGGAAATTGACAAGACCCA
CCTTGGGAAGATCCCAGACGGAAAACTCTTACTCATGGCGGACTTCCAAG
ATTTCAATGGCAGAGCTAGGACCATGCAGCTGAGCCTTCAAAATGCCCGA
TGAATGGGTCATCGCATGGATCTAGCCCGCGAACTGCAGAACCCCGGTCA
CACGAACTGGAACCCAATGGATTTCCCCGAGTCATTGCTGCTAGAGATTG
AGAGTGGGGTGTTGATTCGGGACGTCCAGGAACAGATCGCGCGACGCATG
CGAAATGCGCAGCCCGGACAGAATGTCATCATGCAACTGAATATGGGCGA
GGGCAAGTCTTCCGTCATCGTCCCCATCGTGGCAGCCGCGCTCGCAGACC
GTTCATGCCTAGTTCGCATCATTGTTTCTAAGCCCCAGTCGCGTCAGATG
TTTCAGATGCTCGTTTCGAAGCTGGGGTGCCTTTTAGGGCGGCGGGTGTA
TCATCTCCCCGTGTCACGCTCGTTGCAGATCGGGGAACCGGAGGCGGAAG
AGATCGAATGGATATGCCACGACTGCATGGCGGAGGGCGGAGTTCTCCTC
GTTCAGCCCGAGCACCTCTTATCCCTGAAGCTGATGTGTCTCGAGTGCTT
TATCACAGGGAGAGAGGCGGTTGGTGTATGTCTTCTGCGAATTCTGGATT
TCTTCAGGACCTCCTCGCGAGACGTAGTGGATGAAAGCGATGAGAACTTC
AGTGTGAAGTTCGAGCTGATCTACACGATGGGGACCCAGCGTCCGTTGGA
GCTCAGTCCGCAGAGGTGGACTTTAATGCAAGAGATGCTCGGCCTGGTGA
GGAAGTATGCTCCAGTTATCAAGATGCAGTTCCCGCGGTCAATTGAGGTG
GAGGAGCCGCATCCAGGATGTTTCCCCAGGATACGGTTGCTCCGAGCGGA
TGCCGTCCATCAGCTGTTTGAACGGATTGCGGATCATATTTTCCATAACG
GTATTGACAAACTGCCAATTCCAAGGCAGCCAGAAGCACAACGACGCGCG
GCGATCGCTTATTGCCTTAACACTGACCCGTTACCACTGCAGATTGCTGC
AGTTGAAACCCCAGATGCGTCTGGCTTAGGGAACGACAGCACGAGGGATC
CTCTGCTACTACTCCGGGGTCTGCTGGCTGGCAACGTTCTGGCATTCTGC
CTGGGACAAAGACGCTGGCGAGTCAACTATGGACTTGATCGCTGCCGACA
ACCCCCCACAAGGCTGGCAGTTCCGTATCGTGCCAAGGATAATCCGGCAC
CACGGGCGGAATTCAGTCATCCCGATGTTGTCATTGTACTGACGTGCCTG
AGCTATTACTATGAGGGACTCCGCGACGAGGACCTATTCCGAGCATTCGA
CCATCTGGTCGGATCGGATCAAGCTGACTCGGAGTATCAAATATGGGTCG
ATGATGCCCCGACTCTCCCCCCGGCCTATCGTCAATTGCTGGGCGCTAAT
CTTCAGGACCGGCTCCATTGCGTGGAATGCATTTTCCCCTGTCTTCGGTT
CGCGAAGGGAGCCATCGATTACTTCCTGGCTCATATTATTTTCACCAAAG
GCCTAAGGGAGTTTCCGAGTAAATTATCTTCGTCCGGATGGGATATCGGT
GAGGTCAAGTGCCATCCCACCGTCGGCTTTAGCGGGACCAACGATTCCCG
TGTCACCCTTCCGCTCAGTGTGGAGCAGCTGGATCTACCTGACCAGAACC
ACACCAATGCGTTAGTTCTCGAATATCTTCTCCGACCCGAGACTGGCATT
GCCCTGATTCCGACCCGAGATGACCTGTCCAAGTCAGATGCGCAGGTCCT
TCTGGATATGGTGGCGGAACTGGGTTCACCCGTACGCGTGATTCTGGACG
TTGAAGCTCGCATATTAGAGCTGAGTAACCTGGATGTTGCGAAGACCTGG
TTGGAGATGGTCAGTAATGATGGTCGAACGCAGGCTGTGGTCTTTATCAA
CGACGACGACGATATCGCCGTGGTAGATCGGACCGGACTCGTCGAACCGC
TGCAGACGTCACCTTTCAAAAGGCACCTCGATCTATGCCTTGTGTTCCTT
GACGAAGCACATACGAGAGGGATTGATCTGAAGCTACCCCTGAATTACCG
GGCGGCGGTGACGCTGGGACCGAACATCACAAAAGACAAGCTGGTTCAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009084-T1.utr5p1 | KJC3_009084-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022105 |
| DBxref | InterPro:IPR022099 |
| DBxref | PFAM:PF12359 |
| DBxref | PFAM:PF12340 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4337689..4341153 - |
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