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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4405289..4408063- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009086-T2 ID=KJC3_009086-T2|Name=KJC3_009086-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2775bp|location=Sequence derived from alignment at ch6:4405289..4408063- (Aspergillus niger KJC3)
CTCCGTCGCTCGGCGATGTTCGCAGGACCGAAGGTGGAGAGCAGGCCTCT
TTTGGCAAGGAGTGACCGCCCCAAACGCGCATAAATAGCCATAGCCGTCT
TCCTTCTTCCAGCGACATCGTTCCATTTCCCTTTTCACCTTTTCCTGTTG
CCCATCGGGCGGTTCTTATCCGCAATGACATATTCGGGCCTCCCTCGGAG
GAAACATGCTCCAGGAGATGACAAACCTGGCCGCAAGTCCTACCTGTACT
ATGCGCAGCGGCGAAAGCTGCACCTGGAAAGCGGGCCAACGCTACCGAAA
TACTCGCCAAATACCAATGTTTCTGCGGCATCAGTGAGAGGGAAATGGGT
GAGGTATCGTTCGGTTAGCTATATCTGTATTTTTATCACGGTATTACTTA
CTCCTGTTGTCGACAGATTTTGCACTGAGGCATGCCTGGACCCGGACGAT
CTCCTTAAGAACATGACTTCAGCAGACGTCAAATCCTGGTTCGACTGGAT
CGAAAAGAACTTCAAAGGGTCTATTAAAGCCCACGGCGCGCTTGCCAACT
ACTGGAGAACTTTGAAGAGGCTATACTTCTTGAAAACCCGCCGGGAGATG
GATGCAGACATGAGGGTAGATTGCCTCAACGTACGTGATGGTCTCCAAGT
ACCCATTCAAGAGTTCTATCTAATGGTAAGCCCTAGTATATGAATGTTGT
CAGTACGAGAATGGGTTTGCGTAAGCACTCACTGCCAAAGCCGACGGGCC
AATCGGAGGATCTTTTGCAGTATCTTGTGTCCCATCTTGTGGATTGTGAT
TCGGTATTCGCGGACGAAAAGCAGCGTCTCTATGCCCTCCCGGCGCTCAA
TCTGTCCTGCATATCTGCCTGTCGAGCCGTATCTTTCTTTGACACAAGAC
ACCGCGTCCAATTTCAGGCGGACGGCACGTTGGTACCTCCTACAAATACG
TCAGCTAAGGTTAGAACGCCTTTACCTTTGCCTTCCATCAAGGAGGCCCT
GTGTGATCCAGGAACCAAAATCAGCATGGAAAGCGACGATTATGCGGAAG
GAGGTTCGATATCCGAGACCAGCTCGTATACTGACTCGGAAGTGGATACG
GCGAGCGACAGCGATCACCAGTCGGATTGTTCTAGTGTCACAGATGACGG
GTACCTTAACGGGAATGAGGAGACGGGCACTATCCTTTGGCGGCACGTGG
AATTCTATATTATTCGTAACCCAGTGCCTGGACGTCGCCATATCCTAGCC
GCCATTGTGTCCATCCTGCATACGAAAGGGGAAGGAAGGAAGCCTCGGCT
GTAAGTCATCGAGCTAGGTGATGTGGTGTCACGGACTTACCTAATCATTA
GGAAGAGATATGTTATCGAGCACGAGGATAATTTGATATTCGATGTGTTA
TCACAGCTTCTGGCGCTGGCAATACATGATGATATCTTCGAAGCTACTAT
CCAAGATGTGTCCCATATATACACAGTACCAATTCCTGATCATCGAAAGG
GCATCCAGCTGAAGATAAAGAGAGAAAAGCTGGATGTATCGGTCTTCCGT
GAGCCTGAACATACCCCCGAGGGCTACAGGACATCTGATTCGCGCCCTCT
GAAGTCCAAGACCTGGAGCCGGTATGTCAAACGGATTGGAGTGCGAAGTG
GCCAGGAACGTAACCTTACACAGAAGGTGTTCCGGCGCGGTGCAATCAAT
GCCATTAACAGTAAGACCACCTTTGGTACTGCTCATTCTTTATGGCTTAC
ATGAATACCGATTTAGACAACGCTCCATCCTCGGTCCGTGATCAAGTCGC
TGATCACGAATCTAATGCCGTGAAATACTACCTCAATGAGATAGTCGATT
TTGATACAGCGGCAGCGTTTCACAAACGCCCATCAAACGAGGTCGTTCAA
CGTGAGCTGAGATCAGCGACCTTGCTGGCGGATAAAACCGCACCTATTGG
ATTGACGGCTGCCCAGGCTCAGAGAATCTCTAGGGACCCTGAGGTCCGTC
GTCTTCGAAGCGTCTGTCGCGCATTGACTGCGGAAATCCGCAGCCAGGGC
TATAAGTTTCTGAAGGATGCCGCAGGCACCGAGATCGGTGAGCGGAAGAA
ACGTGCAGATGTCGAGCTCAACAGGACACTTACAAGGCTCCGAGAGGAGG
CCAAGGAGAGGAATCGCCGAAGGCACTTTCGGAAGACAGACACGGCTATT
TTCAACCAACAGTACGAGCTCGATCGGCCCTGTCATGAGGCTAAACTACA
GCCTCATGTGGCCCGGACCTACCAAATCCCCGAGCGCAAGGAGCTCGTTG
ATCTGCTCTGCTATTCAACTCCCACCAAAACAGACGAGGAAGCTCATCTT
CGTCGGTTGAAATACATCCGCCTTATGGTCCGATGGCAAGACCGGAAGGA
GAGTCCTCGGCGGGGTAAACAGTCAGCGACCATACCAAAGCCGCAGCCAG
CGAACCCTTCATCTGCCAGTGTCGTCGAAAAATTTGACCCACTGCAATGT
CCATTTTGCCTTTCGGATACGCGCCTCTCACCTGCTGACCGCACGAAGCG
AAAGAGCAAAACAAATAAGCTCTGGGACCACGTGGAAAGGATTCACGAAC
AAGAGCTTGCAGCATTTGACTCGGGATTTCGCAAATGCGGACTATGTGGG
CTGAGGAATATTGACTTCATGCCATCTAGCGTGTCCAATTTCAAGAACCA
CACCCACACCGTCCATGGAATCAGACTCAGACCTTAGTTTAATGCACTCA
AATAGTTAAATTTGACTTTATGAAA back to topCoding sequence (CDS) from alignment at ch6:4405289..4408063- >KJC3_009086-T2 ID=KJC3_009086-T2|Name=KJC3_009086-T2|organism=Aspergillus niger KJC3|type=CDS|length=5823bp|location=Sequence derived from alignment at ch6:4405289..4408063- (Aspergillus niger KJC3)
ACAACGCTCCATCCTCGGTCCGTGATCAAGTCGCTGATCACGAATCTAAT
GCCGTGAAATACTACCTCAATGAGATAGTCGATTTTGATACAGCGGCAGC
GTTTCACAAACGCCCATCAAACGAGGTCGTTCAACGTGAGCTGAGATCAG
CGACCTTGCTGGCGGATAAAACCGCACCTATTGGATTGACGGCTGCCCAG
GCTCAGAGAATCTCTAGGGACCCTGAGGTCCGTCGTCTTCGAAGCGTCTG
TCGCGCATTGACTGCGGAAATCCGCAGCCAGGGCTATAAGTTTCTGAAGG
ATGCCGCAGGCACCGAGATCGGTGAGCGGAAGAAACGTGCAGATGTCGAG
CTCAACAGGACACTTACAAGGCTCCGAGAGGAGGCCAAGGAGAGGAATCG
CCGAAGGCACTTTCGGAAGACAGACACGGCTATTTTCAACCAACAGTACG
AGCTCGATCGGCCCTGTCATGAGGCTAAACTACAGCCTCATGTGGCCCGG
ACCTACCAAATCCCCGAGCGCAAGGAGCTCGTTGATCTGCTCTGCTATTC
AACTCCCACCAAAACAGACGAGGAAGCTCATCTTCGTCGGTTGAAATACA
TCCGCCTTATGGTCCGATGGCAAGACCGGAAGGAGAGTCCTCGGCGGGGT
AAACAGTCAGCGACCATACCAAAGCCGCAGCCAGCGAACCCTTCATCTGC
CAGTGTCGTCGAAAAATTTGACCCACTGCAATGTCCATTTTGCCTTTCGG
ATACGCGCCTCTCACCTGCTGACCGCACGAAGCGAAAGAGCAAAACAAAT
AAGCTCTGGGACCACGTGGAAAGGATTCACGAACAAGAGCTTGCAGCATT
TGACTCGGGATTTCGCAAATGCGGACTATGTGGGCTGAGGAATATTGACT
TCATGCCATCTAGCGTGTCCAATTTCAAGAACCACACCCACACCGTCCAT
GGAATCAGACTCAGACCTTAGGAAGAGATATGTTATCGAGCACGAGGATA
ATTTGATATTCGATGTGTTATCACAGCTTCTGGCGCTGGCAATACATGAT
GATATCTTCGAAGCTACTATCCAAGATGTGTCCCATATATACACAGTACC
AATTCCTGATCATCGAAAGGGCATCCAGCTGAAGATAAAGAGAGAAAAGC
TGGATGTATCGGTCTTCCGTGAGCCTGAACATACCCCCGAGGGCTACAGG
ACATCTGATTCGCGCCCTCTGAAGTCCAAGACCTGGAGCCGGTATGTCAA
ACGGATTGGAGTGCGAAGTGGCCAGGAACGTAACCTTACACAGAAGGTGT
TCCGGCGCGGTGCAATCAATGCCATTAACAATGAATGTTGTCAGTACGAG
AATGGGTTTGCGTAAGCACTCACTGCCAAAGCCGACGGGCCAATCGGAGG
ATCTTTTGCAGTATCTTGTGTCCCATCTTGTGGATTGTGATTCGGTATTC
GCGGACGAAAAGCAGCGTCTCTATGCCCTCCCGGCGCTCAATCTGTCCTG
CATATCTGCCTGTCGAGCCGTATCTTTCTTTGACACAAGACACCGCGTCC
AATTTCAGGCGGACGGCACGTTGGTACCTCCTACAAATACGTCAGCTAAG
GTTAGAACGCCTTTACCTTTGCCTTCCATCAAGGAGGCCCTGTGTGATCC
AGGAACCAAAATCAGCATGGAAAGCGACGATTATGCGGAAGGAGGTTCGA
TATCCGAGACCAGCTCGTATACTGACTCGGAAGTGGATACGGCGAGCGAC
AGCGATCACCAGTCGGATTGTTCTAGTGTCACAGATGACGGGTACCTTAA
CGGGAATGAGGAGACGGGCACTATCCTTTGGCGGCACGTGGAATTCTATA
TTATTCGTAACCCAGTGCCTGGACGTCGCCATATCCTAGCCGCCATTGTG
TCCATCCTGCATACGAAAGGGGAAGGAAGGAAGCCTCGGCTACAACGCTC
CATCCTCGGTCCGTGATCAAGTCGCTGATCACGAATCTAATGCCGTGAAA
TACTACCTCAATGAGATAGTCGATTTTGATACAGCGGCAGCGTTTCACAA
ACGCCCATCAAACGAGGTCGTTCAACGTGAGCTGAGATCAGCGACCTTGC
TGGCGGATAAAACCGCACCTATTGGATTGACGGCTGCCCAGGCTCAGAGA
ATCTCTAGGGACCCTGAGGTCCGTCGTCTTCGAAGCGTCTGTCGCGCATT
GACTGCGGAAATCCGCAGCCAGGGCTATAAGTTTCTGAAGGATGCCGCAG
GCACCGAGATCGGTGAGCGGAAGAAACGTGCAGATGTCGAGCTCAACAGG
ACACTTACAAGGCTCCGAGAGGAGGCCAAGGAGAGGAATCGCCGAAGGCA
CTTTCGGAAGACAGACACGGCTATTTTCAACCAACAGTACGAGCTCGATC
GGCCCTGTCATGAGGCTAAACTACAGCCTCATGTGGCCCGGACCTACCAA
ATCCCCGAGCGCAAGGAGCTCGTTGATCTGCTCTGCTATTCAACTCCCAC
CAAAACAGACGAGGAAGCTCATCTTCGTCGGTTGAAATACATCCGCCTTA
TGGTCCGATGGCAAGACCGGAAGGAGAGTCCTCGGCGGGGTAAACAGTCA
GCGACCATACCAAAGCCGCAGCCAGCGAACCCTTCATCTGCCAGTGTCGT
CGAAAAATTTGACCCACTGCAATGTCCATTTTGCCTTTCGGATACGCGCC
TCTCACCTGCTGACCGCACGAAGCGAAAGAGCAAAACAAATAAGCTCTGG
GACCACGTGGAAAGGATTCACGAACAAGAGCTTGCAGCATTTGACTCGGG
ATTTCGCAAATGCGGACTATGTGGGCTGAGGAATATTGACTTCATGCCAT
CTAGCGTGTCCAATTTCAAGAACCACACCCACACCGTCCATGGAATCAGA
CTCAGACCTTAGGAAGAGATATGTTATCGAGCACGAGGATAATTTGATAT
TCGATGTGTTATCACAGCTTCTGGCGCTGGCAATACATGATGATATCTTC
GAAGCTACTATCCAAGATGTGTCCCATATATACACAGTACCAATTCCTGA
TCATCGAAAGGGCATCCAGCTGAAGATAAAGAGAGAAAAGCTGGATGTAT
CGGTCTTCCGTGAGCCTGAACATACCCCCGAGGGCTACAGGACATCTGAT
TCGCGCCCTCTGAAGTCCAAGACCTGGAGCCGGTATGTCAAACGGATTGG
AGTGCGAAGTGGCCAGGAACGTAACCTTACACAGAAGGTGTTCCGGCGCG
GTGCAATCAATGCCATTAACAATGAATGTTGTCAGTACGAGAATGGGTTT
GCGTAAGCACTCACTGCCAAAGCCGACGGGCCAATCGGAGGATCTTTTGC
AGTATCTTGTGTCCCATCTTGTGGATTGTGATTCGGTATTCGCGGACGAA
AAGCAGCGTCTCTATGCCCTCCCGGCGCTCAATCTGTCCTGCATATCTGC
CTGTCGAGCCGTATCTTTCTTTGACACAAGACACCGCGTCCAATTTCAGG
CGGACGGCACGTTGGTACCTCCTACAAATACGTCAGCTAAGGTTAGAACG
CCTTTACCTTTGCCTTCCATCAAGGAGGCCCTGTGTGATCCAGGAACCAA
AATCAGCATGGAAAGCGACGATTATGCGGAAGGAGGTTCGATATCCGAGA
CCAGCTCGTATACTGACTCGGAAGTGGATACGGCGAGCGACAGCGATCAC
CAGTCGGATTGTTCTAGTGTCACAGATGACGGGTACCTTAACGGGAATGA
GGAGACGGGCACTATCCTTTGGCGGCACGTGGAATTCTATATTATTCGTA
ACCCAGTGCCTGGACGTCGCCATATCCTAGCCGCCATTGTGTCCATCCTG
CATACGAAAGGGGAAGGAAGGAAGCCTCGGCTACAACGCTCCATCCTCGG
TCCGTGATCAAGTCGCTGATCACGAATCTAATGCCGTGAAATACTACCTC
AATGAGATAGTCGATTTTGATACAGCGGCAGCGTTTCACAAACGCCCATC
AAACGAGGTCGTTCAACGTGAGCTGAGATCAGCGACCTTGCTGGCGGATA
AAACCGCACCTATTGGATTGACGGCTGCCCAGGCTCAGAGAATCTCTAGG
GACCCTGAGGTCCGTCGTCTTCGAAGCGTCTGTCGCGCATTGACTGCGGA
AATCCGCAGCCAGGGCTATAAGTTTCTGAAGGATGCCGCAGGCACCGAGA
TCGGTGAGCGGAAGAAACGTGCAGATGTCGAGCTCAACAGGACACTTACA
AGGCTCCGAGAGGAGGCCAAGGAGAGGAATCGCCGAAGGCACTTTCGGAA
GACAGACACGGCTATTTTCAACCAACAGTACGAGCTCGATCGGCCCTGTC
ATGAGGCTAAACTACAGCCTCATGTGGCCCGGACCTACCAAATCCCCGAG
CGCAAGGAGCTCGTTGATCTGCTCTGCTATTCAACTCCCACCAAAACAGA
CGAGGAAGCTCATCTTCGTCGGTTGAAATACATCCGCCTTATGGTCCGAT
GGCAAGACCGGAAGGAGAGTCCTCGGCGGGGTAAACAGTCAGCGACCATA
CCAAAGCCGCAGCCAGCGAACCCTTCATCTGCCAGTGTCGTCGAAAAATT
TGACCCACTGCAATGTCCATTTTGCCTTTCGGATACGCGCCTCTCACCTG
CTGACCGCACGAAGCGAAAGAGCAAAACAAATAAGCTCTGGGACCACGTG
GAAAGGATTCACGAACAAGAGCTTGCAGCATTTGACTCGGGATTTCGCAA
ATGCGGACTATGTGGGCTGAGGAATATTGACTTCATGCCATCTAGCGTGT
CCAATTTCAAGAACCACACCCACACCGTCCATGGAATCAGACTCAGACCT
TAGGAAGAGATATGTTATCGAGCACGAGGATAATTTGATATTCGATGTGT
TATCACAGCTTCTGGCGCTGGCAATACATGATGATATCTTCGAAGCTACT
ATCCAAGATGTGTCCCATATATACACAGTACCAATTCCTGATCATCGAAA
GGGCATCCAGCTGAAGATAAAGAGAGAAAAGCTGGATGTATCGGTCTTCC
GTGAGCCTGAACATACCCCCGAGGGCTACAGGACATCTGATTCGCGCCCT
CTGAAGTCCAAGACCTGGAGCCGGTATGTCAAACGGATTGGAGTGCGAAG
TGGCCAGGAACGTAACCTTACACAGAAGGTGTTCCGGCGCGGTGCAATCA
ATGCCATTAACAATGAATGTTGTCAGTACGAGAATGGGTTTGCGTAAGCA
CTCACTGCCAAAGCCGACGGGCCAATCGGAGGATCTTTTGCAGTATCTTG
TGTCCCATCTTGTGGATTGTGATTCGGTATTCGCGGACGAAAAGCAGCGT
CTCTATGCCCTCCCGGCGCTCAATCTGTCCTGCATATCTGCCTGTCGAGC
CGTATCTTTCTTTGACACAAGACACCGCGTCCAATTTCAGGCGGACGGCA
CGTTGGTACCTCCTACAAATACGTCAGCTAAGGTTAGAACGCCTTTACCT
TTGCCTTCCATCAAGGAGGCCCTGTGTGATCCAGGAACCAAAATCAGCAT
GGAAAGCGACGATTATGCGGAAGGAGGTTCGATATCCGAGACCAGCTCGT
ATACTGACTCGGAAGTGGATACGGCGAGCGACAGCGATCACCAGTCGGAT
TGTTCTAGTGTCACAGATGACGGGTACCTTAACGGGAATGAGGAGACGGG
CACTATCCTTTGGCGGCACGTGGAATTCTATATTATTCGTAACCCAGTGC
CTGGACGTCGCCATATCCTAGCCGCCATTGTGTCCATCCTGCATACGAAA
GGGGAAGGAAGGAAGCCTCGGCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009086-T2.utr3p1 | KJC3_009086-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021842 |
| DBxref | PFAM:PF11917 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4405289..4408063 - |
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