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KJC3_009088-T1, KJC3_009088-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009088-T1
Unique NameKJC3_009088-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4461197..4462855-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009088-T1 ID=KJC3_009088-T1|Name=KJC3_009088-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1659bp|location=Sequence derived from alignment at ch6:4461197..4462855- (Aspergillus niger KJC3)
ATGTCGCAAAATTTATCCGGTGAAACTCAACTACCCAGCCTCAATGTCCT
GGGGACAGAAACACGGGAGACTCTTCGAGTATCGAGAGTGACGGAAAGCT
GTCCACCCCTTGATGTAAACTATCCTGAACTTGGGCGTCCGGCAGATCCC
CTCTTCCCGGAAGAATACACCGTCGAGACGCAAACTGGCTTGGTTCCAGT
CAGGACCCTTGAGAGAATCCGGTCCTCTGCCACCGGAGGACGACGGCCTT
CAGCTCCCACTGTTGAAAAAGCGGGTAAGCCGTATGAGTTTGTGACTTTC
CAGATTAACGACCCGGCAAACCCGTTAAATTGGTCTCGTCTGTATCGTTG
GTATATCACGATGGTCGTATCGGCCCTAGTTGTCTGCATCGCATATGGCT
CTGCTATTGTCACTGGGGGTCTGGGCTTGATTGAAGAAAAGTATCACGTC
TCCCTGGAAGTGGCTATCCTGACATGTTCCATCATGGTTTGCGGATTTGC
CGTGGGCCCGTTGCTTTGGTCTCCGTTATCGGAGATTATTGGCCGACGAC
AAGTATATATTATCTCGCTGGCTCTATATACCGTCTTTCAGATCCCGTGC
GCCCTGTCGCCAAACATCGGCGGCCTCCTTGCCTGCCGGTTCCTGTGCGG
CGTCTTTTCCAGTTCCGGTCTTTCTCTGGCCGGCGGCACCATCGCGGACA
TCTGGAACATCGAAGAACGGGGCATGGCCATTGCCTACTTTGCTGCCGCA
CCGTATTGCGGCCCTGTCATTGGTCCCATAGTCTGCGGTTGGATCAATGT
CGGCTCACACAGGCTCGATCTCTTCTTCTGGACCAATATGGCTTTCTCAG
GAGCAATAATGGTTATCGTTGGGCTCATCCCAGAGACATATGCCCCGGTC
ATCCTCAAACGCCGTGCAAAGAAACTCCGCCAGGAAACCGGGAACACGAA
TATCATCACGGAGCAGGAGCAAGTAAGGCCGACTTTCCGCGACATCGTCC
GCATCAGTCTCATCCGGCCCATCACGATGATTTTAACCGAGCCTGTGCTG
GATTTGATGTGCATGTATATCGTGCTCATCTACGCCTATCTTTACGCCTA
CTTCTTCGCCTACCCCGTCATTTTTGGCAAGCTATACGGGTACAATGATG
GCCAGATCGGCCTCATGTTCATTCCTATCTTAATCGGCGCGGGCTTCTCG
CTCCTCATCACCCCCATGATTGAGAGACAGTTTAAGCGAGTATGTCGGAC
GCGGGCGCCCACGCCTGAAGATCGACTTGTTGGGGCCCTACTCGGTGCAC
CATTCATCCCCATTGCGATGTTCATTCTCGGCGCGACGTCGTTCAAGCAT
ATCATCTGGGTCGGTCCTGCGTCATCGGGCATCGCATTTGGATTCGGAAT
GGTGCTGTGCTACTACGCGGTGAATAATTATATCATCGACTCGTACCAGA
AGTACGCGGCGTCGGCGCTGGCCGCGAAAGTGTTCTTGCGATCAGGTGGC
GGAGCTGCGTTTCCGCTGTTCACAACACAGATGTATGAGCGGCTGGGTCT
ACAATGGGCGTCGTGGCTATTAGCCTTTATTGGAGTGGCTATGGTGTTTG
TTCCATATGGGTTTTATTGGTTTGGGGAAAGGATTAGGGCCAAACTGACT
CGTAAATGA
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Coding sequence (CDS) from alignment at ch6:4461197..4462855-

>KJC3_009088-T1 ID=KJC3_009088-T1|Name=KJC3_009088-T1|organism=Aspergillus niger KJC3|type=CDS|length=1659bp|location=Sequence derived from alignment at ch6:4461197..4462855- (Aspergillus niger KJC3)
ATGTCGCAAAATTTATCCGGTGAAACTCAACTACCCAGCCTCAATGTCCT
GGGGACAGAAACACGGGAGACTCTTCGAGTATCGAGAGTGACGGAAAGCT
GTCCACCCCTTGATGTAAACTATCCTGAACTTGGGCGTCCGGCAGATCCC
CTCTTCCCGGAAGAATACACCGTCGAGACGCAAACTGGCTTGGTTCCAGT
CAGGACCCTTGAGAGAATCCGGTCCTCTGCCACCGGAGGACGACGGCCTT
CAGCTCCCACTGTTGAAAAAGCGGGTAAGCCGTATGAGTTTGTGACTTTC
CAGATTAACGACCCGGCAAACCCGTTAAATTGGTCTCGTCTGTATCGTTG
GTATATCACGATGGTCGTATCGGCCCTAGTTGTCTGCATCGCATATGGCT
CTGCTATTGTCACTGGGGGTCTGGGCTTGATTGAAGAAAAGTATCACGTC
TCCCTGGAAGTGGCTATCCTGACATGTTCCATCATGGTTTGCGGATTTGC
CGTGGGCCCGTTGCTTTGGTCTCCGTTATCGGAGATTATTGGCCGACGAC
AAGTATATATTATCTCGCTGGCTCTATATACCGTCTTTCAGATCCCGTGC
GCCCTGTCGCCAAACATCGGCGGCCTCCTTGCCTGCCGGTTCCTGTGCGG
CGTCTTTTCCAGTTCCGGTCTTTCTCTGGCCGGCGGCACCATCGCGGACA
TCTGGAACATCGAAGAACGGGGCATGGCCATTGCCTACTTTGCTGCCGCA
CCGTATTGCGGCCCTGTCATTGGTCCCATAGTCTGCGGTTGGATCAATGT
CGGCTCACACAGGCTCGATCTCTTCTTCTGGACCAATATGGCTTTCTCAG
GAGCAATAATGGTTATCGTTGGGCTCATCCCAGAGACATATGCCCCGGTC
ATCCTCAAACGCCGTGCAAAGAAACTCCGCCAGGAAACCGGGAACACGAA
TATCATCACGGAGCAGGAGCAAGTAAGGCCGACTTTCCGCGACATCGTCC
GCATCAGTCTCATCCGGCCCATCACGATGATTTTAACCGAGCCTGTGCTG
GATTTGATGTGCATGTATATCGTGCTCATCTACGCCTATCTTTACGCCTA
CTTCTTCGCCTACCCCGTCATTTTTGGCAAGCTATACGGGTACAATGATG
GCCAGATCGGCCTCATGTTCATTCCTATCTTAATCGGCGCGGGCTTCTCG
CTCCTCATCACCCCCATGATTGAGAGACAGTTTAAGCGAGTATGTCGGAC
GCGGGCGCCCACGCCTGAAGATCGACTTGTTGGGGCCCTACTCGGTGCAC
CATTCATCCCCATTGCGATGTTCATTCTCGGCGCGACGTCGTTCAAGCAT
ATCATCTGGGTCGGTCCTGCGTCATCGGGCATCGCATTTGGATTCGGAAT
GGTGCTGTGCTACTACGCGGTGAATAATTATATCATCGACTCGTACCAGA
AGTACGCGGCGTCGGCGCTGGCCGCGAAAGTGTTCTTGCGATCAGGTGGC
GGAGCTGCGTTTCCGCTGTTCACAACACAGATGTATGAGCGGCTGGGTCT
ACAATGGGCGTCGTGGCTATTAGCCTTTATTGGAGTGGCTATGGTGTTTG
TTCCATATGGGTTTTATTGGTTTGGGGAAAGGATTAGGGCCAAACTGACT
CGTAAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009088KJC3_009088Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009088-T1.cdsKJC3_009088-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009088-T1.exon1KJC3_009088-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009088-T1KJC3_009088-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4461197..4462855 -
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