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KJC3_009114-T1, KJC3_009114-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009114-T1
Unique NameKJC3_009114-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4589054..4591183-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009114-T1 ID=KJC3_009114-T1|Name=KJC3_009114-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2130bp|location=Sequence derived from alignment at ch6:4589054..4591183- (Aspergillus niger KJC3)
CGCGGGAAGGTTATGTGGATTGCCACGTTCTGGAGCCCGAATTCCACCGC
ATTTTCTCTCTCTCGGACCCACCACTGATTCAGCGCCTCCATCTTTAGTT
TATTGCCACAAGTTAAGTGGCTGTTGATATCCCGCTGACTCGCCCTGACC
AGGGATGCCCTAACAAAGTCCGACCAGATTAGCCATCAATGCCTGCGGCT
CTGCAACTCCCTACAAACACTTTTCCTTTGCACACTATATCCTGCAAAAT
TATGCTTGCCGTTATCTCCGTCCAGACTATTTTAAATACACCCTATCCAC
CATGACCTGCCCATTCTTCCTCTTCACGAATTCCACCCTAGTCCCTCTTT
CCCCTCGTGCAGAAGAACCCAACTGCAATCCTCACCATGCCCGATATTGA
GGATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTCCCCCGCCTCCAGCA
CCACCACCGTTGCTGCCCTCTACCCGGAAACCGATCTCGACAAGGGCATC
ATCGGCTGGGACAGTCAAGATGACCCCAGCAACCCGCAAAACTTTTCTCC
GAAACGCAAATGGATGCTCCTCGCCCTGATGAGCTCCTTTACCTTCATCT
CGCCGCTGGCGTCGAGCATGTTCTCCCCCGCCATCAGCTACGTGGCCGCC
GACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTCAGTGTCACCATCTT
CCTCCTCGGCTATACCGTATGCTTCCCACTACACCATCAATCCCTCCCCA
CATCTAAAGCTATCCCCATACTAATGACCCCAGGTCGGCCCCCTCTTCCT
CGCCCCCCTTAGCGAAATCTACGGCCGCCGCATCACTTTAAGCGTTGCAA
ACTGGTTCTTCGTCGTCTGGCAAATCGGCTGCGCCCTCGCCCCAAACCTT
TCCAGCCTGATTGTCTTCCGTCTCTTCGCCGGCATGGGTGGCGTGGGCTG
CATCACCCTCGGCGCCGGTGTCATCGCCGACCTCTTTCCCACCACCCAGC
GCGGCATGGCCACCTCCATCTGGGCTATGGGCCCCTTAATCGGCCCCGTC
GTTGGCCCCATTGCGGGTGGCTTCATCGGCGAAACCATCGGCTGGCGATG
GGTATTCTGGATCCTGCTCATCACCAGCGGCACCATCGGCGCCAGCATCG
AGCTCCTCAACCGCGAAACTTACGCCCCTGTCCTAATCCGCTGGAAAACA
GCCAAGCTCGCACGCGAACTCAACCGTCCTGAGCTCCGCAGCGCCTACGA
CATCTCCCAAGGCACCACGCCCCCGACCGTCTCTCAAGCACTAATGCAAG
GCCTCCGCCGCCCCATCATCCTCATCTGCAAGAGCCCCATCGTCCTCCTC
CTCTCCGTCTACATGGCCTTCGTCTACGGCCTCCTCTACCTCTTCTTCAC
GACCATCACCACCGTCTTCGAAGGCGTCTACGGCTTCTCGACCGGCCTTG
CAGGCCTCTCCTACCTAGGTATCGGAGTAGGCTTCTTCATCGGCATGGCC
GCCGTCGCAATGACGAGTGACCGCATGGTCATCAAACTCACCGCCCGCAA
CAACGGCGTCTTCCAACCCGAGATGCGTCTCCCCACCATGATCATCTTCG
CCTGCTTCCTTCCTATCAGCTTCTTTTGGTACGGCTGGTCCGCTAAGTAC
GAGGCTATGTGGATCGTGCCGATCATTGGTATGGCGCCGTTCGGCATCGG
CATGATAGGCATATATATGCCGATTCAGATGTACGTGATCGATTGTTATC
CGGCGTATGCGGCGAGTGCGAATGCCGCGTTGACGGCCACGAGATCGTTG
GTCGGTTCGGTGTTGCCGCTTGCTGGGCCGAAGCTCTTCAGTAGTTTGGG
GCTCGGGTGGGGGAACTCGTTGCTGGGGTTTTTGGCGTTGGCGTTTGTGC
CGGTGCCGATTTTGTTTAATCGCTATGGGCAGACAATTCGCGAGAGGTGG
GTTGTGAGGTTGGATTAGTTTCATACCCTACACCACTCCTTTTTATTCTT
GTCTCTCTTGATGTGTAGTAAAGCTGGCATGGGTGGAGTAAAAGTTATAT
AGATGATAGATGTACCGTGCATACATACATGCATATCTTAATGTGAAATA
TGAACAATATAACATACGATACTACTACAG
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Coding sequence (CDS) from alignment at ch6:4589054..4591183-

>KJC3_009114-T1 ID=KJC3_009114-T1|Name=KJC3_009114-T1|organism=Aspergillus niger KJC3|type=CDS|length=3030bp|location=Sequence derived from alignment at ch6:4589054..4591183- (Aspergillus niger KJC3)
GTCGGCCCCCTCTTCCTCGCCCCCCTTAGCGAAATCTACGGCCGCCGCAT
CACTTTAAGCGTTGCAAACTGGTTCTTCGTCGTCTGGCAAATCGGCTGCG
CCCTCGCCCCAAACCTTTCCAGCCTGATTGTCTTCCGTCTCTTCGCCGGC
ATGGGTGGCGTGGGCTGCATCACCCTCGGCGCCGGTGTCATCGCCGACCT
CTTTCCCACCACCCAGCGCGGCATGGCCACCTCCATCTGGGCTATGGGCC
CCTTAATCGGCCCCGTCGTTGGCCCCATTGCGGGTGGCTTCATCGGCGAA
ACCATCGGCTGGCGATGGGTATTCTGGATCCTGCTCATCACCAGCGGCAC
CATCGGCGCCAGCATCGAGCTCCTCAACCGCGAAACTTACGCCCCTGTCC
TAATCCGCTGGAAAACAGCCAAGCTCGCACGCGAACTCAACCGTCCTGAG
CTCCGCAGCGCCTACGACATCTCCCAAGGCACCACGCCCCCGACCGTCTC
TCAAGCACTAATGCAAGGCCTCCGCCGCCCCATCATCCTCATCTGCAAGA
GCCCCATCGTCCTCCTCCTCTCCGTCTACATGGCCTTCGTCTACGGCCTC
CTCTACCTCTTCTTCACGACCATCACCACCGTCTTCGAAGGCGTCTACGG
CTTCTCGACCGGCCTTGCAGGCCTCTCCTACCTAGGTATCGGAGTAGGCT
TCTTCATCGGCATGGCCGCCGTCGCAATGACGAGTGACCGCATGGTCATC
AAACTCACCGCCCGCAACAACGGCGTCTTCCAACCCGAGATGCGTCTCCC
CACCATGATCATCTTCGCCTGCTTCCTTCCTATCAGCTTCTTTTGGTACG
GCTGGTCCGCTAAGTACGAGGCTATGTGGATCGTGCCGATCATTGGTATG
GCGCCGTTCGGCATCGGCATGATAGGCATATATATGCCGATTCAGATGTA
CGTGATCGATTGTTATCCGGCGTATGCGGCGAGTGCGAATGCCGCGTTGA
CGGCCACGAGATCGTTGGTCGGTTCGGTGTTGCCGCTTGCTGGGCCGAAG
CTCTTCAGTAGTTTGGGGCTCGGGTGGGGGAACTCGTTGCTGGGGTTTTT
GGCGTTGGCGTTTGTGCCGGTGCCGATTTTGTTTAATCGCTATGGGCAGA
CAATTCGCGAGAGGTGGGTTGTGAGGTTGGATTAGATGCCCGATATTGAG
GATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTCCCCCGCCTCCAGCAC
CACCACCGTTGCTGCCCTCTACCCGGAAACCGATCTCGACAAGGGCATCA
TCGGCTGGGACAGTCAAGATGACCCCAGCAACCCGCAAAACTTTTCTCCG
AAACGCAAATGGATGCTCCTCGCCCTGATGAGCTCCTTTACCTTCATCTC
GCCGCTGGCGTCGAGCATGTTCTCCCCCGCCATCAGCTACGTGGCCGCCG
ACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTCAGTGTCACCATCTTC
CTCCTCGGCTATACCGTCGGCCCCCTCTTCCTCGCCCCCCTTAGCGAAAT
CTACGGCCGCCGCATCACTTTAAGCGTTGCAAACTGGTTCTTCGTCGTCT
GGCAAATCGGCTGCGCCCTCGCCCCAAACCTTTCCAGCCTGATTGTCTTC
CGTCTCTTCGCCGGCATGGGTGGCGTGGGCTGCATCACCCTCGGCGCCGG
TGTCATCGCCGACCTCTTTCCCACCACCCAGCGCGGCATGGCCACCTCCA
TCTGGGCTATGGGCCCCTTAATCGGCCCCGTCGTTGGCCCCATTGCGGGT
GGCTTCATCGGCGAAACCATCGGCTGGCGATGGGTATTCTGGATCCTGCT
CATCACCAGCGGCACCATCGGCGCCAGCATCGAGCTCCTCAACCGCGAAA
CTTACGCCCCTGTCCTAATCCGCTGGAAAACAGCCAAGCTCGCACGCGAA
CTCAACCGTCCTGAGCTCCGCAGCGCCTACGACATCTCCCAAGGCACCAC
GCCCCCGACCGTCTCTCAAGCACTAATGCAAGGCCTCCGCCGCCCCATCA
TCCTCATCTGCAAGAGCCCCATCGTCCTCCTCCTCTCCGTCTACATGGCC
TTCGTCTACGGCCTCCTCTACCTCTTCTTCACGACCATCACCACCGTCTT
CGAAGGCGTCTACGGCTTCTCGACCGGCCTTGCAGGCCTCTCCTACCTAG
GTATCGGAGTAGGCTTCTTCATCGGCATGGCCGCCGTCGCAATGACGAGT
GACCGCATGGTCATCAAACTCACCGCCCGCAACAACGGCGTCTTCCAACC
CGAGATGCGTCTCCCCACCATGATCATCTTCGCCTGCTTCCTTCCTATCA
GCTTCTTTTGGTACGGCTGGTCCGCTAAGTACGAGGCTATGTGGATCGTG
CCGATCATTGGTATGGCGCCGTTCGGCATCGGCATGATAGGCATATATAT
GCCGATTCAGATGTACGTGATCGATTGTTATCCGGCGTATGCGGCGAGTG
CGAATGCCGCGTTGACGGCCACGAGATCGTTGGTCGGTTCGGTGTTGCCG
CTTGCTGGGCCGAAGCTCTTCAGTAGTTTGGGGCTCGGGTGGGGGAACTC
GTTGCTGGGGTTTTTGGCGTTGGCGTTTGTGCCGGTGCCGATTTTGTTTA
ATCGCTATGGGCAGACAATTCGCGAGAGGTGGGTTGTGAGGTTGGATTAG
ATGCCCGATATTGAGGATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTC
CCCCGCCTCCAGCACCACCACCGTTGCTGCCCTCTACCCGGAAACCGATC
TCGACAAGGGCATCATCGGCTGGGACAGTCAAGATGACCCCAGCAACCCG
CAAAACTTTTCTCCGAAACGCAAATGGATGCTCCTCGCCCTGATGAGCTC
CTTTACCTTCATCTCGCCGCTGGCGTCGAGCATGTTCTCCCCCGCCATCA
GCTACGTGGCCGCCGACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTC
AGTGTCACCATCTTCCTCCTCGGCTATACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009114KJC3_009114Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009114-T1KJC3_009114-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009114-T1.cdsKJC3_009114-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009114-T1.utr3p1KJC3_009114-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009114-T1.exon2KJC3_009114-T1.exon2Aspergillus niger KJC3exon
KJC3_009114-T1.exon1KJC3_009114-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009114-T1.utr5p1KJC3_009114-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4589054..4591183 -
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