|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4688246..4691058+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009149-T1 ID=KJC3_009149-T1|Name=KJC3_009149-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2813bp|location=Sequence derived from alignment at ch6:4688246..4691058+ (Aspergillus niger KJC3)
GATAGTCATCCCGATACTACCTCAGTAGCACCACGCACGCACGGGGGCTA
TCCAGCCTACACCGACGAGGTGTACACTTCCTGTATTGCGAATACTGATT
ATAGACCACATTATAGACATATCTACATCCCTTTTCTTACTGTCTCACTC
TACATACTCATCTACCACTCACCACAACAACCACAATGACGACCCTCCTT
CAATATATCCTCTCGCAGGACTCCTTCAGAAAGTCCGTCCAGCTTCAGTT
CTGTCCCCACTCTTGAATTGTTCTTACTAACATACCTTCACACAATAGAA
ACCGCCTCCCCTCCCTCTACTCCGACTTCCCCATCCACCGCAAGACCAAC
CCCGAGGGATACACCACCAACATCACAGCCTGGGAACATGCCCTAACCTC
CGCCGCAAAGCACGGCTACATCGCTCCACATGGGCCTGCCTCGAAGGGCA
AAGCGAACCACTTGATTCTCAGAGCTGATGAATCCTTGCTACGTGATCTG
GAGATCCCGGAGTGTGGACGACCTGTTGCGCTGGGAGCAGTTTTCGTACG
TCACAATGATATGGATACATGAGAAAATGCGGCGTTCATATTGACTAATT
GTGGCTCTGATGTGATACAGGATGAAGCGACAAGGAATCGAACCATGGTG
CCGCTGCACCTTTATCGAACTAACCCGGCGAGCTTGCGTAAGCCGCAGTG
GGGGATTGATACATCTGTGTTGAGCCCATGGGCTGTGATGAGCTGGGGGA
TGAAGCAGTTGAAAGGGGCTGTGATTGGATCTGAGGAGGCGACGCCGAGA
TTACAGCCTCAGGAGTTGGTTTTGGTAGAGAATCTGAAGGTAGGTAGATT
GGTTTGGATTTCCATTGATGGTTGGTGTGGGTAAGGCTAATGAGGTATGT
TTATAGGAGGCTGCAGACCGCGTAGTTAAGCACGCTACGGGGAATAGTCC
GTCGAAGACTGACTTGGTCTACTCGAAGGAGAGCTTCGTGAGTGAATTCG
CTGGTGTTCTGGATGAAAGGAGTCTCCTGTCGGACGCGGATATGGATGTG
CTTTTACTGTATATGTCGCGTGATAGCGGTGCTATTGCGTATGATGGGAA
GGCATGTATTATCTCATTCATATATTTGCGCTTTTTATCTATCCCATGCA
AGGCGCTAACTATGCTGCAGACTATCAAATTCAGAACCAGTGACGCTCCA
AAAGATATCACAGAGCAAGATACCGCCGTCGCCTCTATCAAAACGCTCAT
GGCGACTATGACCAAGCAGGTGGAGAATCTGGAGAACAAAATCACTGAAC
TGAATTCAACTGCCAAAATGGCGCTGCAAAACAAGAACCGCGTTTCGGCG
CTCTCGGCTGTGCGCTCTAAGAAGCTTGCGGAGCATAATCTGAAACAGAG
ACTGGATACTCTGATGCAGCTTGAGGAGGTATATTCCAAAATCGAGCAGG
CTACGGATCAAGTGCAATTCGTGAAGGTCATGGAGGCAAGCACAGGAGCC
CTTCGAGGCTTGCATACTCAGATCGGCGGTGCGGAGAGGGTCGAAGATGT
GGTGCAAGAGCTGCGTGATGAGATGTCCAAGGTGGACGAGGTCGGAAACA
TCATGAACGAGGCTGGTCCACAGATTGATGAGACTGAGATCGACGACGAG
CTGCAGGAATTGGAGAACAAGGAGCGGGAGGAAATGGAAGAGAAGGAGGC
AGAAGAGACTCGCAAGAAGCTTGCCGAACTTGACAGTCTCCAGCAGGGCG
CTCAGGAAGCCGCTCGCAGAGCAGCAGCAGAGCGAGCCGTGGAATCGGAA
TTGGAGGACCGCCTGTCTCGGATGTCGGTCGAGGAGGGTCCCAATACCAC
TGCTTAGCGCAAGACGATGAACAATCCTCCATGGCCTGGGAACCTGCGCA
ATCCGCATATTCTAGGCACATACACCAAGTGCAATTAATTTTGCGCATTG
GTCATCTGGCTATCAACTGAGCCCTGTAGTGTCTGCGCTTGGACCTCAGG
GACAATAACGGTTTTGTCATCTACAGTCAACTTCTCCGGAGGGTGGGCAT
CTTCCGTCGCATGCATGGCTTCGGTATGCTCAACAACAGGCACACTCGAA
GGCTGATACGTTGTCGGACTGGCAAGCTGGTCGGTTGCCTGATTTGTGCC
TACAGGTTCTTGTGGTATCGTGGTGCGCACCTGCGCTTCGCTCTTTTTTC
GCGCATTGGCAATGAGCCGCTTGAAGTCATCGTCATGACTCGTTGACCAC
GCCGCCGCATCAAAGTCTTTGCGCATGACAGTATCTGTGACGTCCCCTGA
TAGTTGCGCTTGGCCGCCTTGCGTGCGTTCCCAGATATCCAGTTCTCTCA
GCAATTCCCTTTTGGACTTTGGCGTTTTGGAGTCGCAGTTGGCATTCCAC
AAATTCATCCACTCTGTGTGACGTCGTTGCAGAAGGGGCCTCGGGCCCGT
GTTCGGTATACCCAAATCTTTTAACTTCTTTCGGAGCACATTATCTTTCA
ATAGAGAATAGTTTATAATGGGCAGTCGTTCTGGTGTTTTATTCAGGGCG
TCTTTTGCTCTCTGCGACGGTTGTGGCATGGGTTGTAACGATCTATAATT
CCGAGTTAGAAGCACACATGTAGACACGCTCCAAAAGACATATCTTACCC
AAAATTCATTTGTTTGGGCGGCGCGGGCTCTCCAGTGCATGTATCCAAGT
GTCGAAACACCGCTTCATTCTTCATCCTCCGGTTGCAGATTGGGCACGCG
ACCAGTCCGTCGTCTTCAGTGGCGATTAGCATGCGGCGCAACTTTGCCGA
TGAGCATACACAC back to topCoding sequence (CDS) from alignment at ch6:4688246..4691058+ >KJC3_009149-T1 ID=KJC3_009149-T1|Name=KJC3_009149-T1|organism=Aspergillus niger KJC3|type=CDS|length=5856bp|location=Sequence derived from alignment at ch6:4688246..4691058+ (Aspergillus niger KJC3)
ATGACGACCCTCCTTCAATATATCCTCTCGCAGGACTCCTTCAGAAAAAA
CCGCCTCCCCTCCCTCTACTCCGACTTCCCCATCCACCGCAAGACCAACC
CCGAGGGATACACCACCAACATCACAGCCTGGGAACATGCCCTAACCTCC
GCCGCAAAGCACGGCTACATCGCTCCACATGGGCCTGCCTCGAAGGGCAA
AGCGAACCACTTGATTCTCAGAGCTGATGAATCCTTGCTACGTGATCTGG
AGATCCCGGAGTGTGGACGACCTGTTGCGCTGGGAGCAGTTTTCGATGAA
GCGACAAGGAATCGAACCATGGTGCCGCTGCACCTTTATCGAACTAACCC
GGCGAGCTTGCGTAAGCCGCAGTGGGGGATTGATACATCTGTGTTGAGCC
CATGGGCTGTGATGAGCTGGGGGATGAAGCAGTTGAAAGGGGCTGTGATT
GGATCTGAGGAGGCGACGCCGAGATTACAGCCTCAGGAGTTGGTTTTGGT
AGAGAATCTGAAGGAGGCTGCAGACCGCGTAGTTAAGCACGCTACGGGGA
ATAGTCCGTCGAAGACTGACTTGGTCTACTCGAAGGAGAGCTTCGTGAGT
GAATTCGCTGGTGTTCTGGATGAAAGGAGTCTCCTGTCGGACGCGGATAT
GGATGTGCTTTTACTGTATATGTCGCGTGATAGCGGTGCTATTGCGTATG
ATGGGAAGGCATGTATTATCTCATTCATATATTTGCGCTTTTTATCTATC
CCATGCAAGGCGCTAACTATGCTGCAGACTATCAAATTCAGAACCAGTGA
CGCTCCAAAAGATATCACAGAGCAAGATACCGCCGTCGCCTCTATCAAAA
CGCTCATGGCGACTATGACCAAGCAGGTGGAGAATCTGGAGAACAAAATC
ACTGAACTGAATTCAACTGCCAAAATGGCGCTGCAAAACAAGAACCGCGT
TTCGGCGCTCTCGGCTGTGCGCTCTAAGAAGCTTGCGGAGCATAATCTGA
AACAGAGACTGGATACTCTGATGCAGCTTGAGGAGGTATATTCCAAAATC
GAGCAGGCTACGGATCAAGTGCAATTCGTGAAGGTCATGGAGGCAAGCAC
AGGAGCCCTTCGAGGCTTGCATACTCAGATCGGCGGTGCGGAGAGGGTCG
AAGATGTGGTGCAAGAGCTGCGTGATGAGATGTCCAAGGTGGACGAGGTC
GGAAACATCATGAACGAGGCTGGTCCACAGATTGATGAGACTGAGATCGA
CGACGAGCTGCAGGAATTGGAGAACAAGGAGCGGGAGGAAATGGAAGAGA
AGGAGGCAGAAGAGACTCGCAAGAAGCTTGCCGAACTTGACAGTCTCCAG
CAGGGCGCTCAGGAAGCCGCTCGCAGAGCAGCAGCAGAGCGAGCCGTGGA
ATCGGAATTGGAGGACCGCCTGTCTCGGATGTCGGTCGAGGAGGGTCCCA
ATACCACTGCTTAGATGACGACCCTCCTTCAATATATCCTCTCGCAGGAC
TCCTTCAGAAAAAACCGCCTCCCCTCCCTCTACTCCGACTTCCCCATCCA
CCGCAAGACCAACCCCGAGGGATACACCACCAACATCACAGCCTGGGAAC
ATGCCCTAACCTCCGCCGCAAAGCACGGCTACATCGCTCCACATGGGCCT
GCCTCGAAGGGCAAAGCGAACCACTTGATTCTCAGAGCTGATGAATCCTT
GCTACGTGATCTGGAGATCCCGGAGTGTGGACGACCTGTTGCGCTGGGAG
CAGTTTTCGATGAAGCGACAAGGAATCGAACCATGGTGCCGCTGCACCTT
TATCGAACTAACCCGGCGAGCTTGCGTAAGCCGCAGTGGGGGATTGATAC
ATCTGTGTTGAGCCCATGGGCTGTGATGAGCTGGGGGATGAAGCAGTTGA
AAGGGGCTGTGATTGGATCTGAGGAGGCGACGCCGAGATTACAGCCTCAG
GAGTTGGTTTTGGTAGAGAATCTGAAGGAGGCTGCAGACCGCGTAGTTAA
GCACGCTACGGGGAATAGTCCGTCGAAGACTGACTTGGTCTACTCGAAGG
AGAGCTTCGTGAGTGAATTCGCTGGTGTTCTGGATGAAAGGAGTCTCCTG
TCGGACGCGGATATGGATGTGCTTTTACTGTATATGTCGCGTGATAGCGG
TGCTATTGCGTATGATGGGAAGGCATGTATTATCTCATTCATATATTTGC
GCTTTTTATCTATCCCATGCAAGGCGCTAACTATGCTGCAGACTATCAAA
TTCAGAACCAGTGACGCTCCAAAAGATATCACAGAGCAAGATACCGCCGT
CGCCTCTATCAAAACGCTCATGGCGACTATGACCAAGCAGGTGGAGAATC
TGGAGAACAAAATCACTGAACTGAATTCAACTGCCAAAATGGCGCTGCAA
AACAAGAACCGCGTTTCGGCGCTCTCGGCTGTGCGCTCTAAGAAGCTTGC
GGAGCATAATCTGAAACAGAGACTGGATACTCTGATGCAGCTTGAGGAGG
TATATTCCAAAATCGAGCAGGCTACGGATCAAGTGCAATTCGTGAAGGTC
ATGGAGGCAAGCACAGGAGCCCTTCGAGGCTTGCATACTCAGATCGGCGG
TGCGGAGAGGGTCGAAGATGTGGTGCAAGAGCTGCGTGATGAGATGTCCA
AGGTGGACGAGGTCGGAAACATCATGAACGAGGCTGGTCCACAGATTGAT
GAGACTGAGATCGACGACGAGCTGCAGGAATTGGAGAACAAGGAGCGGGA
GGAAATGGAAGAGAAGGAGGCAGAAGAGACTCGCAAGAAGCTTGCCGAAC
TTGACAGTCTCCAGCAGGGCGCTCAGGAAGCCGCTCGCAGAGCAGCAGCA
GAGCGAGCCGTGGAATCGGAATTGGAGGACCGCCTGTCTCGGATGTCGGT
CGAGGAGGGTCCCAATACCACTGCTTAGATGACGACCCTCCTTCAATATA
TCCTCTCGCAGGACTCCTTCAGAAAAAACCGCCTCCCCTCCCTCTACTCC
GACTTCCCCATCCACCGCAAGACCAACCCCGAGGGATACACCACCAACAT
CACAGCCTGGGAACATGCCCTAACCTCCGCCGCAAAGCACGGCTACATCG
CTCCACATGGGCCTGCCTCGAAGGGCAAAGCGAACCACTTGATTCTCAGA
GCTGATGAATCCTTGCTACGTGATCTGGAGATCCCGGAGTGTGGACGACC
TGTTGCGCTGGGAGCAGTTTTCGATGAAGCGACAAGGAATCGAACCATGG
TGCCGCTGCACCTTTATCGAACTAACCCGGCGAGCTTGCGTAAGCCGCAG
TGGGGGATTGATACATCTGTGTTGAGCCCATGGGCTGTGATGAGCTGGGG
GATGAAGCAGTTGAAAGGGGCTGTGATTGGATCTGAGGAGGCGACGCCGA
GATTACAGCCTCAGGAGTTGGTTTTGGTAGAGAATCTGAAGGAGGCTGCA
GACCGCGTAGTTAAGCACGCTACGGGGAATAGTCCGTCGAAGACTGACTT
GGTCTACTCGAAGGAGAGCTTCGTGAGTGAATTCGCTGGTGTTCTGGATG
AAAGGAGTCTCCTGTCGGACGCGGATATGGATGTGCTTTTACTGTATATG
TCGCGTGATAGCGGTGCTATTGCGTATGATGGGAAGGCATGTATTATCTC
ATTCATATATTTGCGCTTTTTATCTATCCCATGCAAGGCGCTAACTATGC
TGCAGACTATCAAATTCAGAACCAGTGACGCTCCAAAAGATATCACAGAG
CAAGATACCGCCGTCGCCTCTATCAAAACGCTCATGGCGACTATGACCAA
GCAGGTGGAGAATCTGGAGAACAAAATCACTGAACTGAATTCAACTGCCA
AAATGGCGCTGCAAAACAAGAACCGCGTTTCGGCGCTCTCGGCTGTGCGC
TCTAAGAAGCTTGCGGAGCATAATCTGAAACAGAGACTGGATACTCTGAT
GCAGCTTGAGGAGGTATATTCCAAAATCGAGCAGGCTACGGATCAAGTGC
AATTCGTGAAGGTCATGGAGGCAAGCACAGGAGCCCTTCGAGGCTTGCAT
ACTCAGATCGGCGGTGCGGAGAGGGTCGAAGATGTGGTGCAAGAGCTGCG
TGATGAGATGTCCAAGGTGGACGAGGTCGGAAACATCATGAACGAGGCTG
GTCCACAGATTGATGAGACTGAGATCGACGACGAGCTGCAGGAATTGGAG
AACAAGGAGCGGGAGGAAATGGAAGAGAAGGAGGCAGAAGAGACTCGCAA
GAAGCTTGCCGAACTTGACAGTCTCCAGCAGGGCGCTCAGGAAGCCGCTC
GCAGAGCAGCAGCAGAGCGAGCCGTGGAATCGGAATTGGAGGACCGCCTG
TCTCGGATGTCGGTCGAGGAGGGTCCCAATACCACTGCTTAGATGACGAC
CCTCCTTCAATATATCCTCTCGCAGGACTCCTTCAGAAAAAACCGCCTCC
CCTCCCTCTACTCCGACTTCCCCATCCACCGCAAGACCAACCCCGAGGGA
TACACCACCAACATCACAGCCTGGGAACATGCCCTAACCTCCGCCGCAAA
GCACGGCTACATCGCTCCACATGGGCCTGCCTCGAAGGGCAAAGCGAACC
ACTTGATTCTCAGAGCTGATGAATCCTTGCTACGTGATCTGGAGATCCCG
GAGTGTGGACGACCTGTTGCGCTGGGAGCAGTTTTCGATGAAGCGACAAG
GAATCGAACCATGGTGCCGCTGCACCTTTATCGAACTAACCCGGCGAGCT
TGCGTAAGCCGCAGTGGGGGATTGATACATCTGTGTTGAGCCCATGGGCT
GTGATGAGCTGGGGGATGAAGCAGTTGAAAGGGGCTGTGATTGGATCTGA
GGAGGCGACGCCGAGATTACAGCCTCAGGAGTTGGTTTTGGTAGAGAATC
TGAAGGAGGCTGCAGACCGCGTAGTTAAGCACGCTACGGGGAATAGTCCG
TCGAAGACTGACTTGGTCTACTCGAAGGAGAGCTTCGTGAGTGAATTCGC
TGGTGTTCTGGATGAAAGGAGTCTCCTGTCGGACGCGGATATGGATGTGC
TTTTACTGTATATGTCGCGTGATAGCGGTGCTATTGCGTATGATGGGAAG
GCATGTATTATCTCATTCATATATTTGCGCTTTTTATCTATCCCATGCAA
GGCGCTAACTATGCTGCAGACTATCAAATTCAGAACCAGTGACGCTCCAA
AAGATATCACAGAGCAAGATACCGCCGTCGCCTCTATCAAAACGCTCATG
GCGACTATGACCAAGCAGGTGGAGAATCTGGAGAACAAAATCACTGAACT
GAATTCAACTGCCAAAATGGCGCTGCAAAACAAGAACCGCGTTTCGGCGC
TCTCGGCTGTGCGCTCTAAGAAGCTTGCGGAGCATAATCTGAAACAGAGA
CTGGATACTCTGATGCAGCTTGAGGAGGTATATTCCAAAATCGAGCAGGC
TACGGATCAAGTGCAATTCGTGAAGGTCATGGAGGCAAGCACAGGAGCCC
TTCGAGGCTTGCATACTCAGATCGGCGGTGCGGAGAGGGTCGAAGATGTG
GTGCAAGAGCTGCGTGATGAGATGTCCAAGGTGGACGAGGTCGGAAACAT
CATGAACGAGGCTGGTCCACAGATTGATGAGACTGAGATCGACGACGAGC
TGCAGGAATTGGAGAACAAGGAGCGGGAGGAAATGGAAGAGAAGGAGGCA
GAAGAGACTCGCAAGAAGCTTGCCGAACTTGACAGTCTCCAGCAGGGCGC
TCAGGAAGCCGCTCGCAGAGCAGCAGCAGAGCGAGCCGTGGAATCGGAAT
TGGAGGACCGCCTGTCTCGGATGTCGGTCGAGGAGGGTCCCAATACCACT
GCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007034 | vacuolar transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009149-T1.utr5p1 | KJC3_009149-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009149-T1.utr3p1 | KJC3_009149-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005024 |
| DBxref | PFAM:PF03357 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4688246..4691058 + |
|
