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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4737170..4741257+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009166-T1 ID=KJC3_009166-T1|Name=KJC3_009166-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4088bp|location=Sequence derived from alignment at ch6:4737170..4741257+ (Aspergillus niger KJC3)
TCTGCCCTCACACACGGAACCCGAGCAGACCAGACTTGTAACGGACCGGG
CAGCGCAGAAGAGCGCCTGTTACTACTCTCAGTCGACCTTTTCTCGCGCC
CGTTTCCCCTTCTTTCTCCTCTTCCTTCTCCTTTCCCTCCCGCCGCAAAG
AAAAAGCCCGCCAAAAAAGCCACTACTAGGAAGTCGGGGGGAAAACCACC
CAAACCACCCCACGTTCTTGTGCAATCCAACGATTGGATCGCGTCTAGCA
TCTTATCTGGAGATCGAATCAGGGGAGCTCGGGACCAAAAATTAAAAAGA
ATCTGGAGCTGGAGCTGGAAGTGATCGAATACCGGCCAGATCCCCCCGGA
GCAAACGTCAGCTGATTAGCCCGTTTCTCGTCCGTTTCCTCACTTGTGAA
GGCAAAAGAAAGACCCAGACCGGCACGCAGACCCATCCACACCTGCCTGC
CTGAGTCTTGCCCTGGTACCAGCCATCCCGAGTCGCTCTGCTCGGATTAC
GGATATTATTGTCCCTTTCCTTCTTGGTTAGTATCATTTTTTCGTTGTTT
TATCGCGGTTTCTTTATTCTTGCTCGGTCGCGTCCCCAATTCGTCCTGCA
TTCCCTTCCTTCCCTGCTGCCGGTTGGTTGGTATGTCCTTTTTTGCTTCC
TCCCTCCCCAGCTCGTCAGTCATCCATTGCCCTCTTCGCTGTTGATGCTC
CGCGCGGCCGTGCGGCTCTTGTTATCGGAGCGATTTCGAAGTCAGGACTT
GGTTGATGCGACTCACCTGGGAGTAGCTTTGCGACATGCTCGTCCGTTGC
GCACCTCCGACGACGTATCGCGCCTCCGCCCGGTGCGCCGTCGCGTCGCC
ACTACCATTGACTTTTCTGCACATGGGACTCTCTCATACAGCTAGCTGAC
CTGGATGCCTCCGATCCTACAGTCCTTTTCTCAAGGATGCTGCCGTGATT
GAGTGTCGTCCGTTTTCACTTGTCCATCCTCGCCGCTCAAATAGTGCCTC
CTCACCTTTCCACCTATCCGTGCAAGTGACGTCTGTTTTGCCTCGCCCGA
CACGTCAAGGACGACCGCGGAACACACCAATTTTATCATCCCCAGCATGC
CCTCGCCCGACCTCTCTCAGCCTGGACAGCTCCCAATTGACGCCCCGGCA
GACCAAGGACAGATTGGCTCAGGGATGTCTAACATAAGCGGGGATTATGG
CGCCGTCGCGTCCGAGACTTCCTCGGGACAAGGTTCGGGCGGATCTGATG
CGATTGCCGAGGGAAAGCAGAATGCGAAGGCTGTTCTCGCCGCATCAGGG
GTGTCTCTAGGCTCTACCGAATTCGCTCATGACGCGTCGAATGGCAATCC
GTCGCCATCGTCTCAGGCGAACAGTGCCAATGGATCCGCGTCGAGCAAGA
AACGATCCCGGGATGGCTCTGTTATAAACTCCTCCCAATCGACAGAAGGC
CTTCCCGTACGTGTACGCGAGACACCTGCCGATAAGATTCTTCTTGAAGA
CTATGTCAACCGGGAATTCCACCATTCTGCGTTGACAGCATGGCAAAATC
CCAGCCAGGAGCTTTTGCATCAGAAACGCGCTGAGCGCGATTATTTCTTG
GCCGTACGGCGCGAGAACCACATGAACCCAGCAGCTCTATATGGTGTTGG
CTACGAAGGCTTCGGCAATCAGCGTACCGACTTGCGGAATCAACATCCCC
AGTTATTATATCCCGCGAATCGACGTCGTCCCGGGAACCGGCGGACGAGG
GAACTCCGAATCTCCCGCAAGGATCTAAAGACCCAGAATGAACAGATCGA
AGATTTAGTGCCAATCCGCTTGGATATCGACTGGGAAAAGATCAAAATCC
GCGATACTTTCACGTGGAATCTTCATGATCGCGTGGTTTCACCTGACCTG
TTCGCAGAGAAGCTCGTAGAGGATCTACAGATCCCTCCCGAGTCGTGTGC
ACCGCTGATACGGATGATCTCTTCAAGTATCCAAGAGCAGCTTTGCGATT
ATTATCCTCAAATCTTCATGGAAGAAGAGCCGCTGGATCCTCACCTCCCC
TACAGCGCCTACAAGAATGATGAGATGCGCATTCTAGTGAAATTGAACAT
CACGATTGGCCAACATACTCTGATTGACCAGTTTGAATGGGATATAAATG
ATCCTCACAACTCTCCCGAGGAGTTTGCTGAGCGTATGACCGACGACTTG
TCTCTTTCCGGCGAATTTACGACTGCAATTGCTCACTCGATTCGCGAACA
ATCACAACTTTTCACCAAATCCCTCTATATCCTCTCCCACCCCTTCGATG
GCCGTCCGATCGATGATCCTGATCTGAAGACCGCGTTCCTCCCTACCCCT
CTGACCTCTTCCTTCCGACCTTTCCAGGCGGCAAAGGAGTTCACTCCCTA
CCTATACGAATTGAATGAAACGGAGCTCGAGCGGACTGAGGTGTCGATAT
CGCGAGATCAACGCCGACAGAAGCGGTCTGTTAACCGTCGTGGTGGTCCC
GCACTGCCTGACCTCAAGGATCGTCAACGCACTATCCGGACCATGCTCGT
CTCGACAGTCATACCCAACTGTGCAGCGTCCCTGGAGGATAGCAATGTCT
ACAAGCGGTCGGGCTCGAGCCGTTCCAGGCGCGCCGCCGTCGGCTTGCGG
GATACCGGAGAGGAGTCAGAGGAGTCTGACAGCGACGAATCGTCAATCAC
CGGCTCACCTGCTATCGGGCCTCACCTAGCTCAAGGAACGGCGCGTACAC
GGGGCATGAGAGGAGCTGCCAGCGCGGCACATGCGGCACTTCGAGCGAGC
CTGGGCCAGTCTGCCACGCCCGAGCCACATAACGAGGCAAGAGCTGCGAG
TCGCAGGCGCGAGATTCGCGAGGAGAGCGTTGTTGAAGAGCCGGATAAGC
TGCTTGTCAAGCTCAAGATCTCCAAGGAGAAGTTCCGGCAATTCCTCGCG
CATGGCTTGCAGTCAATACAAGGCCTTGCGACCCCGGCAGCGCAACCAGC
CTCGCAGCAGAGCACACCCCAAGTTCAGACTCCTACCCCGAACCCCATGG
CTCCGCCCGCCGCTCCCCAACCTGAAGGCCGTGTACCCAGTGTTCCTCCC
GGACAACGACCAGTTCCCGCTCAACAGATCGGAGCCGTAGATGCTCCTCA
TCCCCCTCAGCCAGGAGTCCCCGGGGTGAGTAACTAACGACCTATTACTT
CCATCTCGTCACCCCCATACGGGCCGCAATGTCTGGCTACCGAAGAAGTG
CCGCAGACAGCCACATACTAACATGATTTTATTTAGCCCCCGCCTCCAAG
TTGGCTTGCAGCGGGACTCGCACGCTTAAAACTCTCCTATCCCAACGACT
CTTTCGAGGGGGTCATGCGCTACACCGCTGTTGACACGGAAACCATGCTG
CCGGTAGCGAACTCCAACAGTCAACCCGGCCACAAGCTGAAGTATCAGTA
TCTCCCTCGCATTCGCTGCCACGACTGTCCGGGTAAGCTGTACACTCCAG
GACCCGGCACAACAGTCGACAATTTCGAAGTACATCTCCGGAACCGCCAA
CACAAAGAACGGGTGGAAGAACGAGTTGCGAAAACAGCAGCCGTAGCCGC
AGCTGGGGCCAACGCAGCATAGTAATTAATGATTGAATGATGGAGCAGGG
GGTTTCTACTTTTCACTCATTAACCCGCATTGATGTACACTTTACACTCT
TCTTTTTTCTTCTCTCCTTCCTTTTCAATTCCTCATTGTTCTCGCCTTTG
GCATCATCCTCTTGACTGTCTGATTCAAATCATTGATGTGTGTGTATGTA
CATGACTGAGCGATTGTTCTTGGTTTTCATCCATCCATTCTATCCCTTTT
CCATCTTGGATGTCTTCTACCATCAGAAATGCCTTGGGACATGGATACTC
ACCCTTACCTCTTTCTCTGCTACTTCCTCTACACCTTGGCATTTCAACAT
ATCTACCTACCTCATGGTCGGCGTAAATAGGGGACCTCTTTGTTGTTGTT
GATCTTCTTGGCAGCGTTGAAGAGAATCATCGACTTGGCAATTCTAACAC
CCTTGAATACATATTCGGTGACTATACCTATCATAGTG back to topCoding sequence (CDS) from alignment at ch6:4737170..4741257+ >KJC3_009166-T1 ID=KJC3_009166-T1|Name=KJC3_009166-T1|organism=Aspergillus niger KJC3|type=CDS|length=2091bp|location=Sequence derived from alignment at ch6:4737170..4741257+ (Aspergillus niger KJC3)
ATGCCCTCGCCCGACCTCTCTCAGCCTGGACAGCTCCCAATTGACGCCCC
GGCAGACCAAGGACAGATTGGCTCAGGGATGTCTAACATAAGCGGGGATT
ATGGCGCCGTCGCGTCCGAGACTTCCTCGGGACAAGGTTCGGGCGGATCT
GATGCGATTGCCGAGGGAAAGCAGAATGCGAAGGCTGTTCTCGCCGCATC
AGGGGTGTCTCTAGGCTCTACCGAATTCGCTCATGACGCGTCGAATGGCA
ATCCGTCGCCATCGTCTCAGGCGAACAGTGCCAATGGATCCGCGTCGAGC
AAGAAACGATCCCGGGATGGCTCTGTTATAAACTCCTCCCAATCGACAGA
AGGCCTTCCCGTACGTGTACGCGAGACACCTGCCGATAAGATTCTTCTTG
AAGACTATGTCAACCGGGAATTCCACCATTCTGCGTTGACAGCATGGCAA
AATCCCAGCCAGGAGCTTTTGCATCAGAAACGCGCTGAGCGCGATTATTT
CTTGGCCGTACGGCGCGAGAACCACATGAACCCAGCAGCTCTATATGGTG
TTGGCTACGAAGGCTTCGGCAATCAGCGTACCGACTTGCGGAATCAACAT
CCCCAGTTATTATATCCCGCGAATCGACGTCGTCCCGGGAACCGGCGGAC
GAGGGAACTCCGAATCTCCCGCAAGGATCTAAAGACCCAGAATGAACAGA
TCGAAGATTTAGTGCCAATCCGCTTGGATATCGACTGGGAAAAGATCAAA
ATCCGCGATACTTTCACGTGGAATCTTCATGATCGCGTGGTTTCACCTGA
CCTGTTCGCAGAGAAGCTCGTAGAGGATCTACAGATCCCTCCCGAGTCGT
GTGCACCGCTGATACGGATGATCTCTTCAAGTATCCAAGAGCAGCTTTGC
GATTATTATCCTCAAATCTTCATGGAAGAAGAGCCGCTGGATCCTCACCT
CCCCTACAGCGCCTACAAGAATGATGAGATGCGCATTCTAGTGAAATTGA
ACATCACGATTGGCCAACATACTCTGATTGACCAGTTTGAATGGGATATA
AATGATCCTCACAACTCTCCCGAGGAGTTTGCTGAGCGTATGACCGACGA
CTTGTCTCTTTCCGGCGAATTTACGACTGCAATTGCTCACTCGATTCGCG
AACAATCACAACTTTTCACCAAATCCCTCTATATCCTCTCCCACCCCTTC
GATGGCCGTCCGATCGATGATCCTGATCTGAAGACCGCGTTCCTCCCTAC
CCCTCTGACCTCTTCCTTCCGACCTTTCCAGGCGGCAAAGGAGTTCACTC
CCTACCTATACGAATTGAATGAAACGGAGCTCGAGCGGACTGAGGTGTCG
ATATCGCGAGATCAACGCCGACAGAAGCGGTCTGTTAACCGTCGTGGTGG
TCCCGCACTGCCTGACCTCAAGGATCGTCAACGCACTATCCGGACCATGC
TCGTCTCGACAGTCATACCCAACTGTGCAGCGTCCCTGGAGGATAGCAAT
GTCTACAAGCGGTCGGGCTCGAGCCGTTCCAGGCGCGCCGCCGTCGGCTT
GCGGGATACCGGAGAGGAGTCAGAGGAGTCTGACAGCGACGAATCGTCAA
TCACCGGCTCACCTGCTATCGGGCCTCACCTAGCTCAAGGAACGGCGCGT
ACACGGGGCATGAGAGGAGCTGCCAGCGCGGCACATGCGGCACTTCGAGC
GAGCCTGGGCCAGTCTGCCACGCCCGAGCCACATAACGAGGCAAGAGCTG
CGAGTCGCAGGCGCGAGATTCGCGAGGAGAGCGTTGTTGAAGAGCCGGAT
AAGCTGCTTGTCAAGCTCAAGATCTCCAAGGAGAAGTTCCGGCAATTCCT
CGCGCATGGCTTGCAGTCAATACAAGGCCTTGCGACCCCGGCAGCGCAAC
CAGCCTCGCAGCAGAGCACACCCCAAGTTCAGACTCCTACCCCGAACCCC
ATGGCTCCGCCCGCCGCTCCCCAACCTGAAGGCCGTGTACCCAGTGTTCC
TCCCGGACAACGACCAGTTCCCGCTCAACAGATCGGAGCCGTAGATGCTC
CTCATCCCCCTCAGCCAGGAGTCCCCGGGGTGAGTAACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000228 | nuclear chromosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006338 | chromatin remodeling |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009166-T1.utr3p1 | KJC3_009166-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926115P |
| DBxref | InterPro:IPR006939 |
| DBxref | PFAM:PF04855 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4737170..4741257 + |
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