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KJC3_009166-T2, KJC3_009166-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009166-T2
Unique NameKJC3_009166-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4737170..4741257+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009166-T2 ID=KJC3_009166-T2|Name=KJC3_009166-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4088bp|location=Sequence derived from alignment at ch6:4737170..4741257+ (Aspergillus niger KJC3)
TCTGCCCTCACACACGGAACCCGAGCAGACCAGACTTGTAACGGACCGGG
CAGCGCAGAAGAGCGCCTGTTACTACTCTCAGTCGACCTTTTCTCGCGCC
CGTTTCCCCTTCTTTCTCCTCTTCCTTCTCCTTTCCCTCCCGCCGCAAAG
AAAAAGCCCGCCAAAAAAGCCACTACTAGGAAGTCGGGGGGAAAACCACC
CAAACCACCCCACGTTCTTGTGCAATCCAACGATTGGATCGCGTCTAGCA
TCTTATCTGGAGATCGAATCAGGGGAGCTCGGGACCAAAAATTAAAAAGA
ATCTGGAGCTGGAGCTGGAAGTGATCGAATACCGGCCAGATCCCCCCGGA
GCAAACGTCAGCTGATTAGCCCGTTTCTCGTCCGTTTCCTCACTTGTGAA
GGCAAAAGAAAGACCCAGACCGGCACGCAGACCCATCCACACCTGCCTGC
CTGAGTCTTGCCCTGGTACCAGCCATCCCGAGTCGCTCTGCTCGGATTAC
GGATATTATTGTCCCTTTCCTTCTTGGTTAGTATCATTTTTTCGTTGTTT
TATCGCGGTTTCTTTATTCTTGCTCGGTCGCGTCCCCAATTCGTCCTGCA
TTCCCTTCCTTCCCTGCTGCCGGTTGGTTGGTATGTCCTTTTTTGCTTCC
TCCCTCCCCAGCTCGTCAGTCATCCATTGCCCTCTTCGCTGTTGATGCTC
CGCGCGGCCGTGCGGCTCTTGTTATCGGAGCGATTTCGAAGTCAGGACTT
GGTTGATGCGACTCACCTGGGAGTAGCTTTGCGACATGCTCGTCCGTTGC
GCACCTCCGACGACGTATCGCGCCTCCGCCCGGTGCGCCGTCGCGTCGCC
ACTACCATTGACTTTTCTGCACATGGGACTCTCTCATACAGCTAGCTGAC
CTGGATGCCTCCGATCCTACAGTCCTTTTCTCAAGGATGCTGCCGTGATT
GAGTGTCGTCCGTTTTCACTTGTCCATCCTCGCCGCTCAAATAGTGCCTC
CTCACCTTTCCACCTATCCGTGCAAGTGACGTCTGTTTTGCCTCGCCCGA
CACGTCAAGGACGACCGCGGAACACACCAATTTTATCATCCCCAGCATGC
CCTCGCCCGACCTCTCTCAGCCTGGACAGCTCCCAATTGACGCCCCGGCA
GACCAAGGACAGATTGGCTCAGGGATGTCTAACATAAGCGGGGATTATGG
CGCCGTCGCGTCCGAGACTTCCTCGGGACAAGGTTCGGGCGGATCTGATG
CGATTGCCGAGGGAAAGCAGAATGCGAAGGCTGTTCTCGCCGCATCAGGG
GTGTCTCTAGGCTCTACCGAATTCGCTCATGACGCGTCGAATGGCAATCC
GTCGCCATCGTCTCAGGCGAACAGTGCCAATGGATCCGCGTCGAGCAAGA
AACGATCCCGGGATGGCTCTGTTATAAACTCCTCCCAATCGACAGAAGGC
CTTCCCGTACGTGTACGCGAGACACCTGCCGATAAGATTCTTCTTGAAGA
CTATGTCAACCGGGAATTCCACCATTCTGCGTTGACAGCATGGCAAAATC
CCAGCCAGGAGCTTTTGCATCAGAAACGCGCTGAGCGCGATTATTTCTTG
GCCGTACGGCGCGAGAACCACATGAACCCAGCAGCTCTATATGGTGTTGG
CTACGAAGGCTTCGGCAATCAGCGTACCGACTTGCGGAATCAACATCCCC
AGTTATTATATCCCGCGAATCGACGTCGTCCCGGGAACCGGCGGACGAGG
GAACTCCGAATCTCCCGCAAGGATCTAAAGACCCAGAATGAACAGATCGA
AGATTTAGTGCCAATCCGCTTGGATATCGACTGGGAAAAGATCAAAATCC
GCGATACTTTCACGTGGAATCTTCATGATCGCGTGGTTTCACCTGACCTG
TTCGCAGAGAAGCTCGTAGAGGATCTACAGATCCCTCCCGAGTCGTGTGC
ACCGCTGATACGGATGATCTCTTCAAGTATCCAAGAGCAGCTTTGCGATT
ATTATCCTCAAATCTTCATGGAAGAAGAGCCGCTGGATCCTCACCTCCCC
TACAGCGCCTACAAGAATGATGAGATGCGCATTCTAGTGAAATTGAACAT
CACGATTGGCCAACATACTCTGATTGACCAGTTTGAATGGGATATAAATG
ATCCTCACAACTCTCCCGAGGAGTTTGCTGAGCGTATGACCGACGACTTG
TCTCTTTCCGGCGAATTTACGACTGCAATTGCTCACTCGATTCGCGAACA
ATCACAACTTTTCACCAAATCCCTCTATATCCTCTCCCACCCCTTCGATG
GCCGTCCGATCGATGATCCTGATCTGAAGACCGCGTTCCTCCCTACCCCT
CTGACCTCTTCCTTCCGACCTTTCCAGGCGGCAAAGGAGTTCACTCCCTA
CCTATACGAATTGAATGAAACGGAGCTCGAGCGGACTGAGGTGTCGATAT
CGCGAGATCAACGCCGACAGAAGCGGTCTGTTAACCGTCGTGGTGGTCCC
GCACTGCCTGACCTCAAGGATCGTCAACGCACTATCCGGACCATGCTCGT
CTCGACAGTCATACCCAACTGTGCAGCGTCCCTGGAGGATAGCAATGTCT
ACAAGCGGTCGGGCTCGAGCCGTTCCAGGCGCGCCGCCGTCGGCTTGCGG
GATACCGGAGAGGAGTCAGAGGAGTCTGACAGCGACGAATCGTCAATCAC
CGGCTCACCTGCTATCGGGCCTCACCTAGCTCAAGGAACGGCGCGTACAC
GGGGCATGAGAGGAGCTGCCAGCGCGGCACATGCGGCACTTCGAGCGAGC
CTGGGCCAGTCTGCCACGCCCGAGCCACATAACGAGGCAAGAGCTGCGAG
TCGCAGGCGCGAGATTCGCGAGGAGAGCGTTGTTGAAGAGCCGGATAAGC
TGCTTGTCAAGCTCAAGATCTCCAAGGAGAAGTTCCGGCAATTCCTCGCG
CATGGCTTGCAGTCAATACAAGGCCTTGCGACCCCGGCAGCGCAACCAGC
CTCGCAGCAGAGCACACCCCAAGTTCAGACTCCTACCCCGAACCCCATGG
CTCCGCCCGCCGCTCCCCAACCTGAAGGCCGTGTACCCAGTGTTCCTCCC
GGACAACGACCAGTTCCCGCTCAACAGATCGGAGCCGTAGATGCTCCTCA
TCCCCCTCAGCCAGGAGTCCCCGGGGTGAGTAACTAACGACCTATTACTT
CCATCTCGTCACCCCCATACGGGCCGCAATGTCTGGCTACCGAAGAAGTG
CCGCAGACAGCCACATACTAACATGATTTTATTTAGCCCCCGCCTCCAAG
TTGGCTTGCAGCGGGACTCGCACGCTTAAAACTCTCCTATCCCAACGACT
CTTTCGAGGGGGTCATGCGCTACACCGCTGTTGACACGGAAACCATGCTG
CCGGTAGCGAACTCCAACAGTCAACCCGGCCACAAGCTGAAGTATCAGTA
TCTCCCTCGCATTCGCTGCCACGACTGTCCGGGTAAGCTGTACACTCCAG
GACCCGGCACAACAGTCGACAATTTCGAAGTACATCTCCGGAACCGCCAA
CACAAAGAACGGGTGGAAGAACGAGTTGCGAAAACAGCAGCCGTAGCCGC
AGCTGGGGCCAACGCAGCATAGTAATTAATGATTGAATGATGGAGCAGGG
GGTTTCTACTTTTCACTCATTAACCCGCATTGATGTACACTTTACACTCT
TCTTTTTTCTTCTCTCCTTCCTTTTCAATTCCTCATTGTTCTCGCCTTTG
GCATCATCCTCTTGACTGTCTGATTCAAATCATTGATGTGTGTGTATGTA
CATGACTGAGCGATTGTTCTTGGTTTTCATCCATCCATTCTATCCCTTTT
CCATCTTGGATGTCTTCTACCATCAGAAATGCCTTGGGACATGGATACTC
ACCCTTACCTCTTTCTCTGCTACTTCCTCTACACCTTGGCATTTCAACAT
ATCTACCTACCTCATGGTCGGCGTAAATAGGGGACCTCTTTGTTGTTGTT
GATCTTCTTGGCAGCGTTGAAGAGAATCATCGACTTGGCAATTCTAACAC
CCTTGAATACATATTCGGTGACTATACCTATCATAGTG
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Coding sequence (CDS) from alignment at ch6:4737170..4741257+

>KJC3_009166-T2 ID=KJC3_009166-T2|Name=KJC3_009166-T2|organism=Aspergillus niger KJC3|type=CDS|length=4830bp|location=Sequence derived from alignment at ch6:4737170..4741257+ (Aspergillus niger KJC3)
ATGCCCTCGCCCGACCTCTCTCAGCCTGGACAGCTCCCAATTGACGCCCC
GGCAGACCAAGGACAGATTGGCTCAGGGATGTCTAACATAAGCGGGGATT
ATGGCGCCGTCGCGTCCGAGACTTCCTCGGGACAAGGTTCGGGCGGATCT
GATGCGATTGCCGAGGGAAAGCAGAATGCGAAGGCTGTTCTCGCCGCATC
AGGGGTGTCTCTAGGCTCTACCGAATTCGCTCATGACGCGTCGAATGGCA
ATCCGTCGCCATCGTCTCAGGCGAACAGTGCCAATGGATCCGCGTCGAGC
AAGAAACGATCCCGGGATGGCTCTGTTATAAACTCCTCCCAATCGACAGA
AGGCCTTCCCGTACGTGTACGCGAGACACCTGCCGATAAGATTCTTCTTG
AAGACTATGTCAACCGGGAATTCCACCATTCTGCGTTGACAGCATGGCAA
AATCCCAGCCAGGAGCTTTTGCATCAGAAACGCGCTGAGCGCGATTATTT
CTTGGCCGTACGGCGCGAGAACCACATGAACCCAGCAGCTCTATATGGTG
TTGGCTACGAAGGCTTCGGCAATCAGCGTACCGACTTGCGGAATCAACAT
CCCCAGTTATTATATCCCGCGAATCGACGTCGTCCCGGGAACCGGCGGAC
GAGGGAACTCCGAATCTCCCGCAAGGATCTAAAGACCCAGAATGAACAGA
TCGAAGATTTAGTGCCAATCCGCTTGGATATCGACTGGGAAAAGATCAAA
ATCCGCGATACTTTCACGTGGAATCTTCATGATCGCGTGGTTTCACCTGA
CCTGTTCGCAGAGAAGCTCGTAGAGGATCTACAGATCCCTCCCGAGTCGT
GTGCACCGCTGATACGGATGATCTCTTCAAGTATCCAAGAGCAGCTTTGC
GATTATTATCCTCAAATCTTCATGGAAGAAGAGCCGCTGGATCCTCACCT
CCCCTACAGCGCCTACAAGAATGATGAGATGCGCATTCTAGTGAAATTGA
ACATCACGATTGGCCAACATACTCTGATTGACCAGTTTGAATGGGATATA
AATGATCCTCACAACTCTCCCGAGGAGTTTGCTGAGCGTATGACCGACGA
CTTGTCTCTTTCCGGCGAATTTACGACTGCAATTGCTCACTCGATTCGCG
AACAATCACAACTTTTCACCAAATCCCTCTATATCCTCTCCCACCCCTTC
GATGGCCGTCCGATCGATGATCCTGATCTGAAGACCGCGTTCCTCCCTAC
CCCTCTGACCTCTTCCTTCCGACCTTTCCAGGCGGCAAAGGAGTTCACTC
CCTACCTATACGAATTGAATGAAACGGAGCTCGAGCGGACTGAGGTGTCG
ATATCGCGAGATCAACGCCGACAGAAGCGGTCTGTTAACCGTCGTGGTGG
TCCCGCACTGCCTGACCTCAAGGATCGTCAACGCACTATCCGGACCATGC
TCGTCTCGACAGTCATACCCAACTGTGCAGCGTCCCTGGAGGATAGCAAT
GTCTACAAGCGGTCGGGCTCGAGCCGTTCCAGGCGCGCCGCCGTCGGCTT
GCGGGATACCGGAGAGGAGTCAGAGGAGTCTGACAGCGACGAATCGTCAA
TCACCGGCTCACCTGCTATCGGGCCTCACCTAGCTCAAGGAACGGCGCGT
ACACGGGGCATGAGAGGAGCTGCCAGCGCGGCACATGCGGCACTTCGAGC
GAGCCTGGGCCAGTCTGCCACGCCCGAGCCACATAACGAGGCAAGAGCTG
CGAGTCGCAGGCGCGAGATTCGCGAGGAGAGCGTTGTTGAAGAGCCGGAT
AAGCTGCTTGTCAAGCTCAAGATCTCCAAGGAGAAGTTCCGGCAATTCCT
CGCGCATGGCTTGCAGTCAATACAAGGCCTTGCGACCCCGGCAGCGCAAC
CAGCCTCGCAGCAGAGCACACCCCAAGTTCAGACTCCTACCCCGAACCCC
ATGGCTCCGCCCGCCGCTCCCCAACCTGAAGGCCGTGTACCCAGTGTTCC
TCCCGGACAACGACCAGTTCCCGCTCAACAGATCGGAGCCGTAGATGCTC
CTCATCCCCCTCAGCCAGGAGTCCCCGGGCCCCCGCCTCCAAGTTGGCTT
GCAGCGGGACTCGCACGCTTAAAACTCTCCTATCCCAACGACTCTTTCGA
GGGGGTCATGCGCTACACCGCTGTTGACACGGAAACCATGCTGCCGGTAG
CGAACTCCAACAGTCAACCCGGCCACAAGCTGAAGTATCAGTATCTCCCT
CGCATTCGCTGCCACGACTGTCCGGGTAAGCTGTACACTCCAGGACCCGG
CACAACAGTCGACAATTTCGAAGTACATCTCCGGAACCGCCAACACAAAG
AACGGGTGGAAGAACGAGTTGCGAAAACAGCAGCCGTAGCCGCAGCTGGG
GCCAACGCAGCATAGATGCCCTCGCCCGACCTCTCTCAGCCTGGACAGCT
CCCAATTGACGCCCCGGCAGACCAAGGACAGATTGGCTCAGGGATGTCTA
ACATAAGCGGGGATTATGGCGCCGTCGCGTCCGAGACTTCCTCGGGACAA
GGTTCGGGCGGATCTGATGCGATTGCCGAGGGAAAGCAGAATGCGAAGGC
TGTTCTCGCCGCATCAGGGGTGTCTCTAGGCTCTACCGAATTCGCTCATG
ACGCGTCGAATGGCAATCCGTCGCCATCGTCTCAGGCGAACAGTGCCAAT
GGATCCGCGTCGAGCAAGAAACGATCCCGGGATGGCTCTGTTATAAACTC
CTCCCAATCGACAGAAGGCCTTCCCGTACGTGTACGCGAGACACCTGCCG
ATAAGATTCTTCTTGAAGACTATGTCAACCGGGAATTCCACCATTCTGCG
TTGACAGCATGGCAAAATCCCAGCCAGGAGCTTTTGCATCAGAAACGCGC
TGAGCGCGATTATTTCTTGGCCGTACGGCGCGAGAACCACATGAACCCAG
CAGCTCTATATGGTGTTGGCTACGAAGGCTTCGGCAATCAGCGTACCGAC
TTGCGGAATCAACATCCCCAGTTATTATATCCCGCGAATCGACGTCGTCC
CGGGAACCGGCGGACGAGGGAACTCCGAATCTCCCGCAAGGATCTAAAGA
CCCAGAATGAACAGATCGAAGATTTAGTGCCAATCCGCTTGGATATCGAC
TGGGAAAAGATCAAAATCCGCGATACTTTCACGTGGAATCTTCATGATCG
CGTGGTTTCACCTGACCTGTTCGCAGAGAAGCTCGTAGAGGATCTACAGA
TCCCTCCCGAGTCGTGTGCACCGCTGATACGGATGATCTCTTCAAGTATC
CAAGAGCAGCTTTGCGATTATTATCCTCAAATCTTCATGGAAGAAGAGCC
GCTGGATCCTCACCTCCCCTACAGCGCCTACAAGAATGATGAGATGCGCA
TTCTAGTGAAATTGAACATCACGATTGGCCAACATACTCTGATTGACCAG
TTTGAATGGGATATAAATGATCCTCACAACTCTCCCGAGGAGTTTGCTGA
GCGTATGACCGACGACTTGTCTCTTTCCGGCGAATTTACGACTGCAATTG
CTCACTCGATTCGCGAACAATCACAACTTTTCACCAAATCCCTCTATATC
CTCTCCCACCCCTTCGATGGCCGTCCGATCGATGATCCTGATCTGAAGAC
CGCGTTCCTCCCTACCCCTCTGACCTCTTCCTTCCGACCTTTCCAGGCGG
CAAAGGAGTTCACTCCCTACCTATACGAATTGAATGAAACGGAGCTCGAG
CGGACTGAGGTGTCGATATCGCGAGATCAACGCCGACAGAAGCGGTCTGT
TAACCGTCGTGGTGGTCCCGCACTGCCTGACCTCAAGGATCGTCAACGCA
CTATCCGGACCATGCTCGTCTCGACAGTCATACCCAACTGTGCAGCGTCC
CTGGAGGATAGCAATGTCTACAAGCGGTCGGGCTCGAGCCGTTCCAGGCG
CGCCGCCGTCGGCTTGCGGGATACCGGAGAGGAGTCAGAGGAGTCTGACA
GCGACGAATCGTCAATCACCGGCTCACCTGCTATCGGGCCTCACCTAGCT
CAAGGAACGGCGCGTACACGGGGCATGAGAGGAGCTGCCAGCGCGGCACA
TGCGGCACTTCGAGCGAGCCTGGGCCAGTCTGCCACGCCCGAGCCACATA
ACGAGGCAAGAGCTGCGAGTCGCAGGCGCGAGATTCGCGAGGAGAGCGTT
GTTGAAGAGCCGGATAAGCTGCTTGTCAAGCTCAAGATCTCCAAGGAGAA
GTTCCGGCAATTCCTCGCGCATGGCTTGCAGTCAATACAAGGCCTTGCGA
CCCCGGCAGCGCAACCAGCCTCGCAGCAGAGCACACCCCAAGTTCAGACT
CCTACCCCGAACCCCATGGCTCCGCCCGCCGCTCCCCAACCTGAAGGCCG
TGTACCCAGTGTTCCTCCCGGACAACGACCAGTTCCCGCTCAACAGATCG
GAGCCGTAGATGCTCCTCATCCCCCTCAGCCAGGAGTCCCCGGGCCCCCG
CCTCCAAGTTGGCTTGCAGCGGGACTCGCACGCTTAAAACTCTCCTATCC
CAACGACTCTTTCGAGGGGGTCATGCGCTACACCGCTGTTGACACGGAAA
CCATGCTGCCGGTAGCGAACTCCAACAGTCAACCCGGCCACAAGCTGAAG
TATCAGTATCTCCCTCGCATTCGCTGCCACGACTGTCCGGGTAAGCTGTA
CACTCCAGGACCCGGCACAACAGTCGACAATTTCGAAGTACATCTCCGGA
ACCGCCAACACAAAGAACGGGTGGAAGAACGAGTTGCGAAAACAGCAGCC
GTAGCCGCAGCTGGGGCCAACGCAGCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000228nuclear chromosome
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009166KJC3_009166Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009166-T2KJC3_009166-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009166-T2.utr5p1KJC3_009166-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_009166-T2.utr5p2KJC3_009166-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009166-T2.exon1KJC3_009166-T2.exon1Aspergillus niger KJC3exon
KJC3_009166-T2.exon2KJC3_009166-T2.exon2Aspergillus niger KJC3exon
KJC3_009166-T2.exon3KJC3_009166-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009166-T2.cdsKJC3_009166-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009166-T2.utr3p1KJC3_009166-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG0926115P
DBxrefInterPro:IPR006939
DBxrefPFAM:PF04855
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4737170..4741257 +
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