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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4747559..4751011- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009168-T1 ID=KJC3_009168-T1|Name=KJC3_009168-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3453bp|location=Sequence derived from alignment at ch6:4747559..4751011- (Aspergillus niger KJC3)
GTCTACGTAGCAGTTAGTAGGTGAGTGTTAGAGACTTGACTTGCTGCAGA
GCTGTCACATTCTTCTGTCTCGTCTCTCTTGTTCTTGCAGGATCCAGTCA
CGGCTCCATTTGACGAAGGTCTAGACGTGAAGAGAAGGCAAAGAGAAGGG
AAAGAGAAAAGAAAAATTATGGAGCCCACAGCTATAATCTATGGAACCCC
TATTTTTTTTCTTCCTATGGTCCCACTGACTGAAACCTGCAACACTATTC
AAGCCACACGAGCACAAAGTCAGCCTGTTTATCTTCAAGTAGATTAGTTC
TGGTGATGGTGTTTTGAGTCGCCGGTCTTTGGTGCTAGGAGAATTAACCG
CATCAGGTATGGTTTCGGCTCTCGGTCTCAGAAAATGTGCCGCCGTTCCT
GGTTCGAATCTCAGCGTGTGGCCCGTGGACAGGCTGAAGTTAAGCGGATG
ACGAATCACTGCACAAGTGCAGACGTACAGATAACTTCCAACAGTGGATT
GCGTGATATGGCAGACCGATTGCTGTAACTCCCACGTGCCCTTTCTGCTG
ACACACCCTACTACAGTATTGAAACTGACTGATCTCGTCAACGGTAAGCC
TGCGTACGTCCTGAGGACGAAGTGTCGAGAAATGTCGAGATAGGCACGCC
AAGCCATCGGGTAGAAGTGGGCACTGGATCCAGTGTTGATATCTAACCTT
CTTTATGAATCATTTCGGGGATTCGGAGCCACCGAGGCGCGAGCTGGTGC
CCACTTGGCCGCATAGAGAGAAGAGTTTGCATCCCATGGCCCCCAAACCC
ATTAGTGTCGCCTGAGGGGCTGTTATGCAGCCGGGGAAGCGCATTATTTA
GGATGTTTGCACTATGTCTGGCCTGCAGACCAGTATGCCTCCAATGAGGT
TCTTGTAAACAACGAGGACCCTGGTCATTTTTCGGATATAACGGCTCGAG
GTTAAGTCTGGGCATGATGGCATTGCCCTAACCTAAACACAAGATCCCAT
TCTGAGGTCTATCGGGAATCTGTAGGAAGGTGGGTAACCTGATCCTTGGA
CCTTGGGATGTTATGGTCAATATGCTCCGGTCCATCGAGTGGGGTCCTTC
GCTGGAGATATCCCGTCTGGACTTAACCCCGTCGGCTTTTTCATGATTAA
GCCCGGGTCTTGATTAATCATTTCTTCATATCTTGGCTTGAGGAGGCCCA
CCCATCGAAGAGGCTTTGATGTCTTTATAATGTCCACCATGGCCCTAGTC
CCCCGGCAGGTATCTTCTTGCTTATCCTGTTCCCCAGTCCCTCTAGAAGA
TTCGATTGGTCTGTGGAGATAGTATTGTATACTATAACTGTCTCCATCTA
GGACGTTTCTTTCCACATCGAAGATCGGTCTCTCATCCTTCGCGACCCAT
CCCATAGCATCAAGATTGTTGTTTGCGCGCCTGAGTGAGCGCAGACGTAT
AGTATGAGTGACGTACAGCATACTTCCGGTGCTACAGCACCGGAATTGAC
CGTTGCACCTTCGCATCTCGAGACAACCCACGAAGCGCATCTGCGATCCT
CCGACTCGACCCTCAAATCGGAATCCGCCAGCACATCCGGCGACCCAGAA
AAGGGCCCCGAAGACGTCATCGACAAGGAGGTGGAGCAAGATGGATATGA
TGTTGAGGCCGGCGTACCTCAACCAGAGATGGAAAAGGCAGCGGAGAAGG
AAAAGGATCCCAATTTGGTGGAATGGGATGGTCCAAACGACCCCGAGAAT
CCTCAGAACATGCCCCGTTGGCGCAAGTGGTTGATCACCATGTCGTTGTC
ATTTATGACTACGTGGATCACGTTCGCCAGTAGTGTCTTCTCGACCGCAA
CCATTGTGACTGCCGAGGAATTCGGCGTCTCGACTGAGGTCATGATTTTG
GCAACCAGTCTGGTGGTGTTTGGATTCGCAGTTGGACCGTTGTTCTGGTC
TCCTTTATCGGAGCTGTATGGACGTAGGATTCCACTGTTCTCTGGATACG
CCATCTTCGCCATTTTCCAGATACCTGTTGCAGTGGCACAGAACGTGGAG
ACCATCTTGGTCTGTCGATTTTTGATTGGTATCTTTGGCTGTTCGCCCCT
GGCAGTAGTCGGTGGTGCTATGGCCGACTTCTGGGATCCCGTCGATCGTG
CGGTTGCTATTGCAGCCTTTGCCAGTGCTACCTTCATTGGACCCGTGCTT
GGTAAGTAGAATGCCCACTGGGGGACGATTCCCCATACTGTCGAGGTCTC
TTGTTAACATGTCTGATTCAGGTCCTATTGTCGGAGGGTACCTCACTGAC
TCGTACCTCGGCTGGCGCTGGACAGCCTGGATTACCTTGATCGCATCGGG
ATCCTTTGGCTTGCTGGCCTTCATCATTGTCCCCGAAACCTATGCGCCAG
TGATCCTTCAGAAACGCGCAGCCCGTCTTCGCCGGGAGACCGGCAACGAG
GCTCTGCACTCCCTTTTGGACAATACTCGCCCCACCATGAACGACATCGT
GACCAAGTACCTCCTGCGGCCGGTGATGATGCTTTTCCTCGAACCCATCC
TGCTTTTGATTACCCTATACTTGGCGCTGGTGTACGGCATTCTGTATCTG
TTCTTCGAAGCTTACCCCGTCTCGTTTGAATCGGTGCGCGGGTGGACGAA
CGAGGGTATCGCAGGGCTGCCCTTCATTGGCATCTTGGTGGGTGTGCTCT
GCGGAGTGGCGTTGATTATCTGGCAGACGAAGACGCGATTTGCCCGGAAG
CTGGCCAAACACGGTCGTGTGGTGCCGGAGGAGCGTCTCATTCCGATGAT
GGTGGCGTCGGTCCTGCTGCCCGCGGGCCTGTTCTGGTTCGGCTGGACCT
CGCATCCCAGTACCTCCTGGGGCGCTCAGGTTGTGGCTGGTGTGCCCATT
GGCATGGGAATCCTGGTGATTTTCATGCAGGGTCTCAACTACATCATTGA
CGTGTACTTGATGTTTGCCAACTCAGCCATTGCTGCCAACACCTTGGTGC
GGAGTAGCCTGGGAGGTGCCTTCCCCCTCTTTGCCACGCAAATGTATAAC
AAGCTGGGAGTGGATTGGGCCTCCAGTCTGCTCGGTTTCATCACTGTCGC
CATGATTCCCATCCCTGTCCTCTTCTTCTTCTACGGCAAGAAGCTTCGGG
CTATGAGCCGGTTCAGCCCCAAGTTGTAACTTGGTTGAAAGAAGAAAAGA
ATATTTGCATCTTCTCTCCTGGATTATTTTTTTTCTCTTCCTTTTATGAG
TGTGACTCGCAGCATGGCATTCTCACGCATCAGCATCATGGCGTTGTTCC
AGCGGATATAAAACTTGGGATGATTAATGTTTATTGATTGATTGAGGTAA
TGTTGGCATGGGGATATAGATAGTGATTGCATTTGCATCTGTAGGTATAC
TCCATACAGATATATATACAATATAAAATAATATGATGATCGTGATGGTT
GCA back to topCoding sequence (CDS) from alignment at ch6:4747559..4751011- >KJC3_009168-T1 ID=KJC3_009168-T1|Name=KJC3_009168-T1|organism=Aspergillus niger KJC3|type=CDS|length=3312bp|location=Sequence derived from alignment at ch6:4747559..4751011- (Aspergillus niger KJC3)
GTCCTATTGTCGGAGGGTACCTCACTGACTCGTACCTCGGCTGGCGCTGG
ACAGCCTGGATTACCTTGATCGCATCGGGATCCTTTGGCTTGCTGGCCTT
CATCATTGTCCCCGAAACCTATGCGCCAGTGATCCTTCAGAAACGCGCAG
CCCGTCTTCGCCGGGAGACCGGCAACGAGGCTCTGCACTCCCTTTTGGAC
AATACTCGCCCCACCATGAACGACATCGTGACCAAGTACCTCCTGCGGCC
GGTGATGATGCTTTTCCTCGAACCCATCCTGCTTTTGATTACCCTATACT
TGGCGCTGGTGTACGGCATTCTGTATCTGTTCTTCGAAGCTTACCCCGTC
TCGTTTGAATCGGTGCGCGGGTGGACGAACGAGGGTATCGCAGGGCTGCC
CTTCATTGGCATCTTGGTGGGTGTGCTCTGCGGAGTGGCGTTGATTATCT
GGCAGACGAAGACGCGATTTGCCCGGAAGCTGGCCAAACACGGTCGTGTG
GTGCCGGAGGAGCGTCTCATTCCGATGATGGTGGCGTCGGTCCTGCTGCC
CGCGGGCCTGTTCTGGTTCGGCTGGACCTCGCATCCCAGTACCTCCTGGG
GCGCTCAGGTTGTGGCTGGTGTGCCCATTGGCATGGGAATCCTGGTGATT
TTCATGCAGGGTCTCAACTACATCATTGACGTGTACTTGATGTTTGCCAA
CTCAGCCATTGCTGCCAACACCTTGGTGCGGAGTAGCCTGGGAGGTGCCT
TCCCCCTCTTTGCCACGCAAATGTATAACAAGCTGGGAGTGGATTGGGCC
TCCAGTCTGCTCGGTTTCATCACTGTCGCCATGATTCCCATCCCTGTCCT
CTTCTTCTTCTACGGCAAGAAGCTTCGGGCTATGAGCCGGTTCAGCCCCA
AGTTGTAAATGAGTGACGTACAGCATACTTCCGGTGCTACAGCACCGGAA
TTGACCGTTGCACCTTCGCATCTCGAGACAACCCACGAAGCGCATCTGCG
ATCCTCCGACTCGACCCTCAAATCGGAATCCGCCAGCACATCCGGCGACC
CAGAAAAGGGCCCCGAAGACGTCATCGACAAGGAGGTGGAGCAAGATGGA
TATGATGTTGAGGCCGGCGTACCTCAACCAGAGATGGAAAAGGCAGCGGA
GAAGGAAAAGGATCCCAATTTGGTGGAATGGGATGGTCCAAACGACCCCG
AGAATCCTCAGAACATGCCCCGTTGGCGCAAGTGGTTGATCACCATGTCG
TTGTCATTTATGACTACGTGGATCACGTTCGCCAGTAGTGTCTTCTCGAC
CGCAACCATTGTGACTGCCGAGGAATTCGGCGTCTCGACTGAGGTCATGA
TTTTGGCAACCAGTCTGGTGGTGTTTGGATTCGCAGTTGGACCGTTGTTC
TGGTCTCCTTTATCGGAGCTGTATGGACGTAGGATTCCACTGTTCTCTGG
ATACGCCATCTTCGCCATTTTCCAGATACCTGTTGCAGTGGCACAGAACG
TGGAGACCATCTTGGTCTGTCGATTTTTGATTGGTATCTTTGGCTGTTCG
CCCCTGGCAGTAGTCGGTGGTGCTATGGCCGACTTCTGGGATCCCGTCGA
TCGTGCGGTTGCTATTGCAGCCTTTGCCAGTGCTACCTTCATTGGACCCG
TGCTTGGTCCTATTGTCGGAGGGTACCTCACTGACTCGTACCTCGGCTGG
CGCTGGACAGCCTGGATTACCTTGATCGCATCGGGATCCTTTGGCTTGCT
GGCCTTCATCATTGTCCCCGAAACCTATGCGCCAGTGATCCTTCAGAAAC
GCGCAGCCCGTCTTCGCCGGGAGACCGGCAACGAGGCTCTGCACTCCCTT
TTGGACAATACTCGCCCCACCATGAACGACATCGTGACCAAGTACCTCCT
GCGGCCGGTGATGATGCTTTTCCTCGAACCCATCCTGCTTTTGATTACCC
TATACTTGGCGCTGGTGTACGGCATTCTGTATCTGTTCTTCGAAGCTTAC
CCCGTCTCGTTTGAATCGGTGCGCGGGTGGACGAACGAGGGTATCGCAGG
GCTGCCCTTCATTGGCATCTTGGTGGGTGTGCTCTGCGGAGTGGCGTTGA
TTATCTGGCAGACGAAGACGCGATTTGCCCGGAAGCTGGCCAAACACGGT
CGTGTGGTGCCGGAGGAGCGTCTCATTCCGATGATGGTGGCGTCGGTCCT
GCTGCCCGCGGGCCTGTTCTGGTTCGGCTGGACCTCGCATCCCAGTACCT
CCTGGGGCGCTCAGGTTGTGGCTGGTGTGCCCATTGGCATGGGAATCCTG
GTGATTTTCATGCAGGGTCTCAACTACATCATTGACGTGTACTTGATGTT
TGCCAACTCAGCCATTGCTGCCAACACCTTGGTGCGGAGTAGCCTGGGAG
GTGCCTTCCCCCTCTTTGCCACGCAAATGTATAACAAGCTGGGAGTGGAT
TGGGCCTCCAGTCTGCTCGGTTTCATCACTGTCGCCATGATTCCCATCCC
TGTCCTCTTCTTCTTCTACGGCAAGAAGCTTCGGGCTATGAGCCGGTTCA
GCCCCAAGTTGTAAATGAGTGACGTACAGCATACTTCCGGTGCTACAGCA
CCGGAATTGACCGTTGCACCTTCGCATCTCGAGACAACCCACGAAGCGCA
TCTGCGATCCTCCGACTCGACCCTCAAATCGGAATCCGCCAGCACATCCG
GCGACCCAGAAAAGGGCCCCGAAGACGTCATCGACAAGGAGGTGGAGCAA
GATGGATATGATGTTGAGGCCGGCGTACCTCAACCAGAGATGGAAAAGGC
AGCGGAGAAGGAAAAGGATCCCAATTTGGTGGAATGGGATGGTCCAAACG
ACCCCGAGAATCCTCAGAACATGCCCCGTTGGCGCAAGTGGTTGATCACC
ATGTCGTTGTCATTTATGACTACGTGGATCACGTTCGCCAGTAGTGTCTT
CTCGACCGCAACCATTGTGACTGCCGAGGAATTCGGCGTCTCGACTGAGG
TCATGATTTTGGCAACCAGTCTGGTGGTGTTTGGATTCGCAGTTGGACCG
TTGTTCTGGTCTCCTTTATCGGAGCTGTATGGACGTAGGATTCCACTGTT
CTCTGGATACGCCATCTTCGCCATTTTCCAGATACCTGTTGCAGTGGCAC
AGAACGTGGAGACCATCTTGGTCTGTCGATTTTTGATTGGTATCTTTGGC
TGTTCGCCCCTGGCAGTAGTCGGTGGTGCTATGGCCGACTTCTGGGATCC
CGTCGATCGTGCGGTTGCTATTGCAGCCTTTGCCAGTGCTACCTTCATTG
GACCCGTGCTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009168-T1.utr3p1 | KJC3_009168-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | Citrinin biosynthesis cluster MFS transporter mrr1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4747559..4751011 - |
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