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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4763026..4765289- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009176-T1 ID=KJC3_009176-T1|Name=KJC3_009176-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2264bp|location=Sequence derived from alignment at ch6:4763026..4765289- (Aspergillus niger KJC3)
CCGTCTTGTCTTCCCCGAAACAACCTTCCAGATAAACCCCTCGACTGCAG
GAAGTAGACCGGCCGATAAGTTGCATAATCTGAAACGGTCAGGAGCTACT
GCTGGACCTTTATTCACGATGCAGTCAGGAATCTCAGGTACATATCTACC
AATCTCATTCCTCTCTTCTTCCCCTTGTTCCTGGCGATTACGACATCCCG
CAACCGATCCCCTCGGACATGCCACCTTACAACCCAAGTTACGCTCGTCC
CAGCATTCTTTGCTAACTATGCCCAATAGTCTCTGATGAGCTTCACGAAG
CCTTCAGGAACTTCGTCTCCGATGAATCCATTTTCTGTCTCCCCGTAACA
ATCAAGTCGGAAAGCCTGTCGCCCCTTTCCCCGGTTCCTTTCGCCTCTCC
GAACGCCTTCTACCCGTCTCTTTCCCAGCTCTCGTCCGTCCTTGAACCCA
AGACTCCCCTTTACCTCCTCATTCGTCGTCCTGAGGGTGGTTCATCCTCT
CTCGTGGCTTTGACCTACATTCCCTCCAATGCTGGCGTGCGCGCCAAGAC
TCTCTTCGCCGCAACCCGCGCCACCTTGGCTAGGGAACTAGGCACGGAGA
AGTTCGCTTCGACCATCTTCGCTACAGATGAAGATGAGGTTATTGGCGAG
GAGGCATGGAAGGAGCGAGATGCAGAGAAGAAGGGTACCGCGGGCGGTTT
CCGACGGGAGGATTTAATGGGCGAGAAGGAGCGGGAGTTGGAGGCTGTAC
GGAGAGCCGAAGAGGAGGCTCGCAGCGGCACTCCGAGCAGAGATATTGGT
ATTGGCGGCACGTTCAACAGGGCGAATCCATTCGGTGGTGCGTCCGTCAA
GATGAACGTCGATGATGAGGTTAAGCAGGCCCTCGAAGGGTTACAGCAGG
GTGGGCTGGTTCAGCTGGTACGTGTCTTCTCTCTACGGTTTTCCAACCCA
ACGCATTTGGGTATGTATATTTCCTTTGGGATTGCTCTAACTTCGCTTTT
CTAAATACAGGCCATCGATGTCCCGACGGAGGCGATCAAGGTTGCTGCCG
CTGAGTCCGGGGTGGATGCGAACTCCGTCCAGTCACACATCCCTTCGTCC
TCTCCCCGGTACACACTTTACCACTACCCCGACTCCGACGTGGTGATCTT
CATCTATACCTGCCCCTCGGGTTCCTCGATCAAGGAGCGTATGCTGTACG
CCAGTTCCCGAATGTATGCAATCACTATGGCTGGCGACCAGGGCTTGAAG
ATTTCAAAGAAGGTAAGAGCTGGTTGCAAACGCTCGATTGATTGAAGAGT
CTCCCTAACACAGCATGCAGATTGAGGCGTCATCGCCCGACGAGATCACG
GGCGAAAGGTTGCATGAAGAAGTCCACCCGCCACAGGACAACGGACCGAG
CCGGGGATTTGCGAGACCGAGACGCCCGGGTCGGTAAATCTCCGTGCGTG
GGTGGATGACCCCGTAATTTCTTGTATATCCCGCTCTATGATCCGCGATA
GTATATAGCCCCGGGCACCTGTGAACCGAAACACCGCCGGTACCATTCTT
CTCTCTCTTCCGTAGGTGTAGCTGTCTCATTCTCAACAACCGTTTATATT
CGCCCAAGCCACTCCCATAAATCTGCAGAGCTCCCTAAGGCCAGGAGCAT
ACGATGCAGATAGCAGCAAGTTCGCGTCCAAGAGTTCCCAAACGCGTGGC
GAACAAGAAAAACAACACCCAGCCAGCATCAATGATTTCGAAAACTTTTC
TTTTGGTAGAATAAATCTGTCCTCGAACTTCCCAGGTTTATAATCTTCGG
ACAGCCGTCCCGATCCTTCTCGAGTCGCGTGCACTCAAAGCAGTAAAAGG
CATCACTGATACCCTCTCCACCACAAACGATGCACTTGTTCTGGTAGTTT
CCGAAGGAGCACTCGTCGCAGATGCGGACCAGGGTCGTGGGACGCACGTA
GGAGTCGCACACGGGACATTTGCCGTCACACTTATCGCACAAGCGGCCGA
TAGAGATGCCGGGCTGCTTGCGGCACATGACAAGATCGGGATGATGGCGA
GACATGGTGGGTTTATGAGATCAGGAGCTTCTCTTGAAAGTGGTGGGAGA
CGCGACGACTCTTGAAGAACGATGGGCAACGCGAGATATAGAGTGAGAAG
TTCGCTAGCTAAAAGAAAGCTGCAGGTATTACGAGCAGTCGACGCTTCGT
AGCAATAGAATGAGATATGTCAGCAGCAAGACAGTGGAAGGCAATCGAAG
AGTCTGGGTCGGGG back to topCoding sequence (CDS) from alignment at ch6:4763026..4765289- >KJC3_009176-T1 ID=KJC3_009176-T1|Name=KJC3_009176-T1|organism=Aspergillus niger KJC3|type=CDS|length=4104bp|location=Sequence derived from alignment at ch6:4763026..4765289- (Aspergillus niger KJC3)
ATTGAGGCGTCATCGCCCGACGAGATCACGGGCGAAAGGTTGCATGAAGA
AGTCCACCCGCCACAGGACAACGGACCGAGCCGGGGATTTGCGAGACCGA
GACGCCCGGGTCGGTAAGCCATCGATGTCCCGACGGAGGCGATCAAGGTT
GCTGCCGCTGAGTCCGGGGTGGATGCGAACTCCGTCCAGTCACACATCCC
TTCGTCCTCTCCCCGGTACACACTTTACCACTACCCCGACTCCGACGTGG
TGATCTTCATCTATACCTGCCCCTCGGGTTCCTCGATCAAGGAGCGTATG
CTGTACGCCAGTTCCCGAATGTATGCAATCACTATGGCTGGCGACCAGGG
CTTGAAGATTTCAAAGAAGTCTCTGATGAGCTTCACGAAGCCTTCAGGAA
CTTCGTCTCCGATGAATCCATTTTCTGTCTCCCCGTAACAATCAAGTCGG
AAAGCCTGTCGCCCCTTTCCCCGGTTCCTTTCGCCTCTCCGAACGCCTTC
TACCCGTCTCTTTCCCAGCTCTCGTCCGTCCTTGAACCCAAGACTCCCCT
TTACCTCCTCATTCGTCGTCCTGAGGGTGGTTCATCCTCTCTCGTGGCTT
TGACCTACATTCCCTCCAATGCTGGCGTGCGCGCCAAGACTCTCTTCGCC
GCAACCCGCGCCACCTTGGCTAGGGAACTAGGCACGGAGAAGTTCGCTTC
GACCATCTTCGCTACAGATGAAGATGAGGTTATTGGCGAGGAGGCATGGA
AGGAGCGAGATGCAGAGAAGAAGGGTACCGCGGGCGGTTTCCGACGGGAG
GATTTAATGGGCGAGAAGGAGCGGGAGTTGGAGGCTGTACGGAGAGCCGA
AGAGGAGGCTCGCAGCGGCACTCCGAGCAGAGATATTGGTATTGGCGGCA
CGTTCAACAGGGCGAATCCATTCGGTGGTGCGTCCGTCAAGATGAACGTC
GATGATGAGGTTAAGCAGGCCCTCGAAGGGTTACAGCAGGGTGGGCTGGT
TCAGCTGATGCAGTCAGGAATCTCAGATTGAGGCGTCATCGCCCGACGAG
ATCACGGGCGAAAGGTTGCATGAAGAAGTCCACCCGCCACAGGACAACGG
ACCGAGCCGGGGATTTGCGAGACCGAGACGCCCGGGTCGGTAAGCCATCG
ATGTCCCGACGGAGGCGATCAAGGTTGCTGCCGCTGAGTCCGGGGTGGAT
GCGAACTCCGTCCAGTCACACATCCCTTCGTCCTCTCCCCGGTACACACT
TTACCACTACCCCGACTCCGACGTGGTGATCTTCATCTATACCTGCCCCT
CGGGTTCCTCGATCAAGGAGCGTATGCTGTACGCCAGTTCCCGAATGTAT
GCAATCACTATGGCTGGCGACCAGGGCTTGAAGATTTCAAAGAAGTCTCT
GATGAGCTTCACGAAGCCTTCAGGAACTTCGTCTCCGATGAATCCATTTT
CTGTCTCCCCGTAACAATCAAGTCGGAAAGCCTGTCGCCCCTTTCCCCGG
TTCCTTTCGCCTCTCCGAACGCCTTCTACCCGTCTCTTTCCCAGCTCTCG
TCCGTCCTTGAACCCAAGACTCCCCTTTACCTCCTCATTCGTCGTCCTGA
GGGTGGTTCATCCTCTCTCGTGGCTTTGACCTACATTCCCTCCAATGCTG
GCGTGCGCGCCAAGACTCTCTTCGCCGCAACCCGCGCCACCTTGGCTAGG
GAACTAGGCACGGAGAAGTTCGCTTCGACCATCTTCGCTACAGATGAAGA
TGAGGTTATTGGCGAGGAGGCATGGAAGGAGCGAGATGCAGAGAAGAAGG
GTACCGCGGGCGGTTTCCGACGGGAGGATTTAATGGGCGAGAAGGAGCGG
GAGTTGGAGGCTGTACGGAGAGCCGAAGAGGAGGCTCGCAGCGGCACTCC
GAGCAGAGATATTGGTATTGGCGGCACGTTCAACAGGGCGAATCCATTCG
GTGGTGCGTCCGTCAAGATGAACGTCGATGATGAGGTTAAGCAGGCCCTC
GAAGGGTTACAGCAGGGTGGGCTGGTTCAGCTGATGCAGTCAGGAATCTC
AGATTGAGGCGTCATCGCCCGACGAGATCACGGGCGAAAGGTTGCATGAA
GAAGTCCACCCGCCACAGGACAACGGACCGAGCCGGGGATTTGCGAGACC
GAGACGCCCGGGTCGGTAAGCCATCGATGTCCCGACGGAGGCGATCAAGG
TTGCTGCCGCTGAGTCCGGGGTGGATGCGAACTCCGTCCAGTCACACATC
CCTTCGTCCTCTCCCCGGTACACACTTTACCACTACCCCGACTCCGACGT
GGTGATCTTCATCTATACCTGCCCCTCGGGTTCCTCGATCAAGGAGCGTA
TGCTGTACGCCAGTTCCCGAATGTATGCAATCACTATGGCTGGCGACCAG
GGCTTGAAGATTTCAAAGAAGTCTCTGATGAGCTTCACGAAGCCTTCAGG
AACTTCGTCTCCGATGAATCCATTTTCTGTCTCCCCGTAACAATCAAGTC
GGAAAGCCTGTCGCCCCTTTCCCCGGTTCCTTTCGCCTCTCCGAACGCCT
TCTACCCGTCTCTTTCCCAGCTCTCGTCCGTCCTTGAACCCAAGACTCCC
CTTTACCTCCTCATTCGTCGTCCTGAGGGTGGTTCATCCTCTCTCGTGGC
TTTGACCTACATTCCCTCCAATGCTGGCGTGCGCGCCAAGACTCTCTTCG
CCGCAACCCGCGCCACCTTGGCTAGGGAACTAGGCACGGAGAAGTTCGCT
TCGACCATCTTCGCTACAGATGAAGATGAGGTTATTGGCGAGGAGGCATG
GAAGGAGCGAGATGCAGAGAAGAAGGGTACCGCGGGCGGTTTCCGACGGG
AGGATTTAATGGGCGAGAAGGAGCGGGAGTTGGAGGCTGTACGGAGAGCC
GAAGAGGAGGCTCGCAGCGGCACTCCGAGCAGAGATATTGGTATTGGCGG
CACGTTCAACAGGGCGAATCCATTCGGTGGTGCGTCCGTCAAGATGAACG
TCGATGATGAGGTTAAGCAGGCCCTCGAAGGGTTACAGCAGGGTGGGCTG
GTTCAGCTGATGCAGTCAGGAATCTCAGATTGAGGCGTCATCGCCCGACG
AGATCACGGGCGAAAGGTTGCATGAAGAAGTCCACCCGCCACAGGACAAC
GGACCGAGCCGGGGATTTGCGAGACCGAGACGCCCGGGTCGGTAAGCCAT
CGATGTCCCGACGGAGGCGATCAAGGTTGCTGCCGCTGAGTCCGGGGTGG
ATGCGAACTCCGTCCAGTCACACATCCCTTCGTCCTCTCCCCGGTACACA
CTTTACCACTACCCCGACTCCGACGTGGTGATCTTCATCTATACCTGCCC
CTCGGGTTCCTCGATCAAGGAGCGTATGCTGTACGCCAGTTCCCGAATGT
ATGCAATCACTATGGCTGGCGACCAGGGCTTGAAGATTTCAAAGAAGTCT
CTGATGAGCTTCACGAAGCCTTCAGGAACTTCGTCTCCGATGAATCCATT
TTCTGTCTCCCCGTAACAATCAAGTCGGAAAGCCTGTCGCCCCTTTCCCC
GGTTCCTTTCGCCTCTCCGAACGCCTTCTACCCGTCTCTTTCCCAGCTCT
CGTCCGTCCTTGAACCCAAGACTCCCCTTTACCTCCTCATTCGTCGTCCT
GAGGGTGGTTCATCCTCTCTCGTGGCTTTGACCTACATTCCCTCCAATGC
TGGCGTGCGCGCCAAGACTCTCTTCGCCGCAACCCGCGCCACCTTGGCTA
GGGAACTAGGCACGGAGAAGTTCGCTTCGACCATCTTCGCTACAGATGAA
GATGAGGTTATTGGCGAGGAGGCATGGAAGGAGCGAGATGCAGAGAAGAA
GGGTACCGCGGGCGGTTTCCGACGGGAGGATTTAATGGGCGAGAAGGAGC
GGGAGTTGGAGGCTGTACGGAGAGCCGAAGAGGAGGCTCGCAGCGGCACT
CCGAGCAGAGATATTGGTATTGGCGGCACGTTCAACAGGGCGAATCCATT
CGGTGGTGCGTCCGTCAAGATGAACGTCGATGATGAGGTTAAGCAGGCCC
TCGAAGGGTTACAGCAGGGTGGGCTGGTTCAGCTGATGCAGTCAGGAATC
TCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003779 | actin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009176-T1.utr3p1 | KJC3_009176-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009176-T1.utr5p1 | KJC3_009176-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029006 |
| DBxref | InterPro:IPR002108 |
| DBxref | PFAM:PF00241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4763026..4765289 - |
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