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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4765669..4768452- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009177-T1 ID=KJC3_009177-T1|Name=KJC3_009177-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2784bp|location=Sequence derived from alignment at ch6:4765669..4768452- (Aspergillus niger KJC3)
CAATATAATTTTTGGCTGTTTTGGGACATAAAACTACCAAGACTATATTT
CTCCTCGCATTTCAAGATTCCTATGTTATTTCATAACCAAATTGTTTCTC
TTAATAATTATTATGTGGTGCTCGGAAGAATGACCTCCGGGGGCGTGGGT
AAATCATGAACCGTGGGGTAAACCTTCAGGAGAGAGGGACATGCGTGACT
TGCAAGGAAGAAGCAACACAAAGGTAAAATACTAGCTCGAAAGGGTAAAA
TCCCAGGGGGTCACAGGGATTAGAGGCATATTTCTTTTGTTTTTCCTTTT
ATCATATTCAGACACTAATCATTATCCCCATTCCTCGCAGGATGAACATT
TCCTTGCTATAACACTGTCGGCACCGACGGACGGAGAAAGGACCTCGGCT
GAAGAACGACCCCAGGCTTGGCCCGGAAATACCCGTGGATCATAGCTGGA
CTGGTGCACCAACTTTCCATCCCCCACACTTCAGGTCACGGTCTTGTCTC
GGTGGTAAAGGGCATGTCACAAGCTAAGGCTTTCGATGTATGTATGTAAG
TAGCTACTGCTGCTTACGACTGGCAGATGACGACAAAATACTGGATTCTC
CAAGCCATGAGGGAACTCTCCAGCATGTGAAGAGCCTGGTCTTACCTGAC
ATTTGGGAACCATGATCTCTGGTTCCGGCTTACCATTGGCACACTGGCCC
CTTGAGCTCATTCACTTTTGGCCACGCCACCTTGGGGCCACAAGGACTGG
AAGTGCCAATCTGCGCGCCGTTAGTCGGAGTGACCTGTGCAGCTTCCGAT
GCCTCGGGGTGAGGTAGAATAAGTTTCAGTAGACACGAGCAGCTTTAACC
ACCACCACCGGGGATATGGCAGCCGTAAGGGTATAAGTGATAAGGATCCC
CCACGTTTAAGAAATTGTAAATCGTGGAGAGTCCATAATCCAATCAGTTG
ACTAGTTCCTTTTCCTTCCGTTGACCCTGTCCCAAGCTGATTCTCAAGGG
CGTTCGGTTGTTGGTCTACTGTGCGAAGACGGCGGCATTGCTTCCGCTCG
TCCAGAGAAGCTTCCTCCGCTTCCCCGTCATAGCTCCCTCCACGCCCGGT
ACGCCTGGGCTAAAATCAATCCAAAGCGACAGCAAAAGCCGCCACTGGAG
CCGAGCCCGTCTGGGATCCTCATTGCCGAGAACGGCCTTGCGAATGTTTG
GGATCTTCCAGCTAAGCCGCTAATCAAGTGACTCCCTCAATCGCCGATTT
AAATACCCTGGGTGGGTAGAGCCGAGGGACGTAGTTATACTTCCGTATCT
CCCCGTATTTTTGGGCCTTCCTGTGAACCTCCGAGATCGTCCCCGTCCTT
TCTTTTAATAAAAAAAAATAAAGATCCCTGGAATCCGGATCGCTGGCGAT
TCACTCTTGATCTTTCTCTCCTCTTTCTCCCCCTTTTGTCAAAGGACTCC
CGCTGCACGCGATCGCCTGGAAACTCGTTCCATTGCGCTGTCGGCTATAG
CTCTTGCAGAAGAGCTTGTTACCAATTGACAGAGAAAACAACGTCTTTGC
AAAACTAGAAATTGTGCACAATGTCCGCAAAGACTGTACAAGGCCGCAAT
GGCAAGAAGCCAGCCTCCCCAGCTGTGAACCTCATCGGTAAGCAATATTC
TCTCGGCGCATTGATTGAGTACGGTACTAACTTGCGACTCAGCTGGTGGT
GGTGCTGGTATGATGGAAGCGCTCGTGTGTCACCCTCTAGGTATGTATAA
TTATGGGTCAATTGGCTGTCTTGAGTGAGGATCGCGCTGACAATCTATGC
CAGACACCATCAAAGTTCGGATGCAGCTCTCCCGCCGTGCCCGGGCACCG
GGTGTAAGTGAGAACCATATGCAAAGCATTGAGTCCTAGCTAACAGTTCG
CTAGGTAAAACCCCGCGGGTTCGTAGCCACCGGTGTTGAGATCGTGAAGA
AGGAGACTGCCATGGGTCTGTACAAGGGACTGGGTGCCGTCCTTGGTGGT
ATCATCCCGAAGATGGCCATCCGGTTCACCTCCTACGAATCTTACAAGCA
AATGCTTGCCGATAAGGAGACTGGTGCTGTGACCAGCAAAGCTACCTTCT
TGGGTAAGTCACGTATTCTTGAATCGCGTCCAGTCATGGATAGGGAGGCT
AACGAGGCTCTTTTATTTAGCTGGTCTTGCTGCTGGTGTGACCGAAGCCG
TGGCAGTGGTCAATCCCATGGAGGTTGTTAAGATTCGTTTGCAAGCACAA
CATCACAGTTTGGCGGACCCTCTCGATACCCCCAAGTACCGCAGTGCACC
ACATGCGCTTTTCACCGTGATTAAGGAAGAGGGTTTCAGCACCCTGTACC
GCGGTGTCTCTCTGACTGCCCTTCGGCAAGGAACCAACCAAGCAGCCAAC
TTCACAGCCTACACCGAATTGAAGGCTTTCCTCCAGAGGGTTCAGCCGGA
GTACAGCAACACACAGCTGCCTTCCTACCAGACAACTTTCATCGGTCTGA
TTTCTGGTGCTGTCGGACCTTTCTCCAATGCCCCGATCGACACGATCAAG
ACGAGATTGCAGAAGACCCGTGCTGAGCCCGGTCAATCAGCGGTGTCTCG
TATCATGGTCATCGCGAAGGACATGTTCAAGCAAGAGGGTGCTCGTGCCT
TCTACAAGGGTATCACGCCCCGTGTGATGAGAGTCGCGCCTGGTCAGGCC
GTCACTTTCACCGTGTATGAGTTCCTGAAGGGCAAGCTGGAGAACTCCGG
ATGGGCCTTCGTCGGTGGAAACTATGAAGAGTAA back to topCoding sequence (CDS) from alignment at ch6:4765669..4768452- >KJC3_009177-T1 ID=KJC3_009177-T1|Name=KJC3_009177-T1|organism=Aspergillus niger KJC3|type=CDS|length=2610bp|location=Sequence derived from alignment at ch6:4765669..4768452- (Aspergillus niger KJC3)
CTGGTCTTGCTGCTGGTGTGACCGAAGCCGTGGCAGTGGTCAATCCCATG
GAGGTTGTTAAGATTCGTTTGCAAGCACAACATCACAGTTTGGCGGACCC
TCTCGATACCCCCAAGTACCGCAGTGCACCACATGCGCTTTTCACCGTGA
TTAAGGAAGAGGGTTTCAGCACCCTGTACCGCGGTGTCTCTCTGACTGCC
CTTCGGCAAGGAACCAACCAAGCAGCCAACTTCACAGCCTACACCGAATT
GAAGGCTTTCCTCCAGAGGGTTCAGCCGGAGTACAGCAACACACAGCTGC
CTTCCTACCAGACAACTTTCATCGGTCTGATTTCTGGTGCTGTCGGACCT
TTCTCCAATGCCCCGATCGACACGATCAAGACGAGATTGCAGAAGACCCG
TGCTGAGCCCGGTCAATCAGCGGTGTCTCGTATCATGGTCATCGCGAAGG
ACATGTTCAAGCAAGAGGGTGCTCGTGCCTTCTACAAGGGTATCACGCCC
CGTGTGATGAGAGTCGCGCCTGGTCAGGCCGTCACTTTCACCGTGTATGA
GTTCCTGAAGGGCAAGCTGGAGAACTCCGGATGGGCCTTCGTCGGTGGAA
ACTATGAAGAGTAAGTAAAACCCCGCGGGTTCGTAGCCACCGGTGTTGAG
ATCGTGAAGAAGGAGACTGCCATGGGTCTGTACAAGGGACTGGGTGCCGT
CCTTGGTGGTATCATCCCGAAGATGGCCATCCGGTTCACCTCCTACGAAT
CTTACAAGCAAATGCTTGCCGATAAGGAGACTGGTGCTGTGACCAGCAAA
GCTACCTTCTTGGATGCCAGACACCATCAAAGTTCGGATGCAGCTCTCCC
GCCGTGCCCGGGCACCGGGTCTGGTCTTGCTGCTGGTGTGACCGAAGCCG
TGGCAGTGGTCAATCCCATGGAGGTTGTTAAGATTCGTTTGCAAGCACAA
CATCACAGTTTGGCGGACCCTCTCGATACCCCCAAGTACCGCAGTGCACC
ACATGCGCTTTTCACCGTGATTAAGGAAGAGGGTTTCAGCACCCTGTACC
GCGGTGTCTCTCTGACTGCCCTTCGGCAAGGAACCAACCAAGCAGCCAAC
TTCACAGCCTACACCGAATTGAAGGCTTTCCTCCAGAGGGTTCAGCCGGA
GTACAGCAACACACAGCTGCCTTCCTACCAGACAACTTTCATCGGTCTGA
TTTCTGGTGCTGTCGGACCTTTCTCCAATGCCCCGATCGACACGATCAAG
ACGAGATTGCAGAAGACCCGTGCTGAGCCCGGTCAATCAGCGGTGTCTCG
TATCATGGTCATCGCGAAGGACATGTTCAAGCAAGAGGGTGCTCGTGCCT
TCTACAAGGGTATCACGCCCCGTGTGATGAGAGTCGCGCCTGGTCAGGCC
GTCACTTTCACCGTGTATGAGTTCCTGAAGGGCAAGCTGGAGAACTCCGG
ATGGGCCTTCGTCGGTGGAAACTATGAAGAGTAAGTAAAACCCCGCGGGT
TCGTAGCCACCGGTGTTGAGATCGTGAAGAAGGAGACTGCCATGGGTCTG
TACAAGGGACTGGGTGCCGTCCTTGGTGGTATCATCCCGAAGATGGCCAT
CCGGTTCACCTCCTACGAATCTTACAAGCAAATGCTTGCCGATAAGGAGA
CTGGTGCTGTGACCAGCAAAGCTACCTTCTTGGATGCCAGACACCATCAA
AGTTCGGATGCAGCTCTCCCGCCGTGCCCGGGCACCGGGTCTGGTCTTGC
TGCTGGTGTGACCGAAGCCGTGGCAGTGGTCAATCCCATGGAGGTTGTTA
AGATTCGTTTGCAAGCACAACATCACAGTTTGGCGGACCCTCTCGATACC
CCCAAGTACCGCAGTGCACCACATGCGCTTTTCACCGTGATTAAGGAAGA
GGGTTTCAGCACCCTGTACCGCGGTGTCTCTCTGACTGCCCTTCGGCAAG
GAACCAACCAAGCAGCCAACTTCACAGCCTACACCGAATTGAAGGCTTTC
CTCCAGAGGGTTCAGCCGGAGTACAGCAACACACAGCTGCCTTCCTACCA
GACAACTTTCATCGGTCTGATTTCTGGTGCTGTCGGACCTTTCTCCAATG
CCCCGATCGACACGATCAAGACGAGATTGCAGAAGACCCGTGCTGAGCCC
GGTCAATCAGCGGTGTCTCGTATCATGGTCATCGCGAAGGACATGTTCAA
GCAAGAGGGTGCTCGTGCCTTCTACAAGGGTATCACGCCCCGTGTGATGA
GAGTCGCGCCTGGTCAGGCCGTCACTTTCACCGTGTATGAGTTCCTGAAG
GGCAAGCTGGAGAACTCCGGATGGGCCTTCGTCGGTGGAAACTATGAAGA
GTAAGTAAAACCCCGCGGGTTCGTAGCCACCGGTGTTGAGATCGTGAAGA
AGGAGACTGCCATGGGTCTGTACAAGGGACTGGGTGCCGTCCTTGGTGGT
ATCATCCCGAAGATGGCCATCCGGTTCACCTCCTACGAATCTTACAAGCA
AATGCTTGCCGATAAGGAGACTGGTGCTGTGACCAGCAAAGCTACCTTCT
TGGATGCCAGACACCATCAAAGTTCGGATGCAGCTCTCCCGCCGTGCCCG
GGCACCGGGT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009177-T1.utr5p1 | KJC3_009177-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018108 |
| DBxref | InterPro:IPR023395 |
| DBxref | PFAM:PF00153 |
| Product | Mitochondrial succinate-fumarate transporter |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4765669..4768452 - |
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