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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4769424..4772707- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009179-T1 ID=KJC3_009179-T1|Name=KJC3_009179-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3284bp|location=Sequence derived from alignment at ch6:4769424..4772707- (Aspergillus niger KJC3)
AGTCCAAGCATTGTACTTAGCCCAACTTAGTGTCACTCTGTTCCCTCGAC
CGTCCCAACCACCCAGAGCTCGATTCGATCGCATCCCTCTATCCCTCGTG
CATTTTCTGCATTTATTGATAGCCGCGCACGTTCCATTCGATTTCCCTTC
TTTGATTCCTCTTTCCGATCCGTCGCATTTTCCGCTGGCGGTGAACAATG
GCCGACGATGGCTCCTACATGTCGGCGTCCCAGTCGCAACTCCTCTCCTC
GTCCACATCCTCATTGTCTCCCTCCAAACTTTGCTCAAAAACATATAAGA
AGGCGTCAAATCTCTATCTAACACTACGGTTACAAGAAGCACTTTCAGCC
CTTGAGCCTGCGATCACAGTGGTCAGGGGATCCGACGAGCAGCTCGTCAA
TGGCGATGATTCTGTCGCGCCCGTTGCTTCAGCCCAGCCGACCTGGCGGA
TCAAAGTGTGGAATCTCTACATTACACTCTTGAGCCAAATCATCGAATTG
GGCCCTGAGGAGGGAAAGAAATTGTTTGGACAGAAAGAATGGAAGGCCAT
CTCGACCACTGTTCGCGATGGTGAGATCTGGGAGACCGTTGTACGGACGG
GGTATAGAGGTTTGGAGGGATCAGTGGATGCAGAAGTCGTCCATAACCTG
TTAGTCTCCACGCCGGGTTGTTAATTGCTTTACTGACAAAGGCCTTCTTT
GCAGGGCAACTCTCTTGTTGAAACATTCGCCATCACAAAAGCTCAACCAA
CAACGACTTGAGACGTACCTTTCGTCATACGGACAACCTAATCTGGATAT
TTCAGACCATCTGACTAGTGGCTCATCTACACCACGTGCAAACGGTGGTA
CCGATACCCCGAAAGATCTAGCTGCTAGGGTCAAGATAATCGAGCTGTTC
ACCCTACATGTTCTTCCCGCAAACGAAGAATGGGAGTATGCGCAGGAATT
CATCAACCTGAGCGAAGTCCTCGATGAGGACCGGAAGGAGTTATTTCTGC
AGACGCTAGAAGGCCTGAAGGAAGAGAAACAGCAAGGGGAGCTGCGCGCC
GCTGCCCTCCAGCGGGAAAAGGATGCCGAGCTAGAAAGACAAGCTCGAGA
GGCAGAACGTCGCAGGGCGGAGGAAGCTGAGGCTGCTGAGCGTGCACAGA
GAGGACATGGACGCAGCGGCAGTGAGGTGGATTACGGGATTGAGAAGACC
TATCCCAATGGCAGCATGAAGGGCAAAGGGAAGTTTGCAGAGAAGCAATC
CAGCAAACCAGGTACCTCCGCAGGTCGGACGGCCTTTTCGCCCCCTGGCT
CCAAGAACATCAAGAACACTGAGAAGCCCGAAGCGCGGGCTAAGCAATCA
CGAGCACTGGTCAACGTGGTGCGCAATATCCTGCGATACGTCAGCAAGAG
CATTGCAGGCAACCCACTATCATTCGCGCGGACGCTTCTGTTTATGCTCG
GCATTATAGCCGCATTAAGCCGACAAGACGTGCGGGAGCGCATCCGGAGG
ATAACAGGCTCCGGTTGGCAGAAAATCAAGGGGACGGTTGGGATGGGAGT
GAAAGTGAGCTATATTTGATGAGCAATAAATTCTGCACTCTTTTCCCTTG
TCTATATGATTCTTCAGATATCAACTGGGGCTTTCCATTTCCCCTGTTTC
TCAACTGCGTGATTGCGGCACGCAGGTTGCCTTTATGTTATATACGATTC
CATTTCTATTGTAAACTCTATGTGCTGAATGCTTGTCTATCCTGTATTAC
GATTAATTATTATGCTCCTGGGACAGACTCACATCTGCCCCTTTGCTCTG
ATTATCCAGATTCCTCCCATCAGACCCTGAACCGTCCAACTTCTCCTCAT
TTTCATTTGCATTTCCCTCTCCATCACACTCCACATCACTTACGCTGGCA
CTCTTCCTCTCAACCCGCCGATGCCACCACTTGAACATATGCACAAAGAA
ATGCGCCACACAAATCTGCTCCGTGGTATACAGCAGCACAGGCACCGACG
TCTTCGACTTGATATACAGACTCAACGGACCCCACATGGCATAAAGCAGC
GGAATGCCCAGTGCAGTACTCTTCGCCGGACCACAGAAACAGACGGCAAT
AGTCTCCTGAGGATTCATCTGCTGGAAGGGATAAAATGTCTTCCCTTTCA
CCGTAAACGACACACCAGAGATGATCCTCGGCGGGCGAGAACAATAGAAG
CAAACAGCCGTAAGGAACATATACAGCGCAATATTGAACAGAACCACGAA
GACAATACTAGAAGCGGAAAGAGTCTGGAGCGCTCCTGTCGCGAAGCAAG
AAGAGAAGGTTGACCTATACCCATTCATGTAAGTTTTGCTGTCTCAACAA
GTATACGGGTCCAAGTCAAACAACTCACCAAACCAACAGAATCAAGCACG
CGGTGCTTATCTTCGCAATGCGATACTTAGCCAACACTTTGCCCACGATG
TCCGGCCAAACCCAGCGTATCAACTGACCCACCACCAACGGCAACAAGAC
CGCCAGACCCAACTGCTTAAACACATCGCGGTACATATCAGAGAGATCCC
CATCCCCCGACCTCCAGACATCAAACTCCGACGACTTTGGAAGCAAAGTA
ACCGTCCACCCAGCGGTGATGAACGGGCCCAGGAAATTCGCAATAATGAC
TTCCACCAGCGCGGCGGCATCGTCACCGCCCGCCGAGCGAGTCATGACGA
CATTCGAAGCGATAGTGGTAGGAATACAGGCCAGGAAGATATACCCGGCC
AGCAAGGCGCGATCAATATGTTCGTCTGGATCACCGGCTAAGATGATATG
CACGATAGCGAGGATAAAGGCCGGTATGACGAGGAACGATAGACCCTGGA
CAAGAACATGCAGTCGCCAGTTGAGGAGGTGAATAATGAGCTTTTCTCGA
GGCACGCTGAGACCCGAGATCAAGAAAATGAGGGCCATTGCGCCGTAGAG
AATGCTATATTCGGAGCGGATGATGCCGCCGCTCTTGGCGACGTTGGGGA
AATAGTAGGCCAAGACGCAGGCGACTCCGATGCCGATGAGGAGCCATTGG
TGGAGGATGAAGAGGGCGATGGTTTTGAAGGTTTGTGTTATGCCCCTGGT
GGATGTGGGGTCATGGTTGGGTATAGACATATCTTTTTTCGCTAGGTGTT
CAGCTCATATGGACTGGTTGTCGAAAATAGGAAATTTTCATGTCTTGGCT
TCAACGTTAGGAAAGCGATCTCTATTCTCCAAAATGAGAAAGATAATCCA
GAATTGTACATACCAACATTGTCGCGTGGTGGAA back to topCoding sequence (CDS) from alignment at ch6:4769424..4772707- >KJC3_009179-T1 ID=KJC3_009179-T1|Name=KJC3_009179-T1|organism=Aspergillus niger KJC3|type=CDS|length=2634bp|location=Sequence derived from alignment at ch6:4769424..4772707- (Aspergillus niger KJC3)
GGCAACTCTCTTGTTGAAACATTCGCCATCACAAAAGCTCAACCAACAAC
GACTTGAGACGTACCTTTCGTCATACGGACAACCTAATCTGGATATTTCA
GACCATCTGACTAGTGGCTCATCTACACCACGTGCAAACGGTGGTACCGA
TACCCCGAAAGATCTAGCTGCTAGGGTCAAGATAATCGAGCTGTTCACCC
TACATGTTCTTCCCGCAAACGAAGAATGGGAGTATGCGCAGGAATTCATC
AACCTGAGCGAAGTCCTCGATGAGGACCGGAAGGAGTTATTTCTGCAGAC
GCTAGAAGGCCTGAAGGAAGAGAAACAGCAAGGGGAGCTGCGCGCCGCTG
CCCTCCAGCGGGAAAAGGATGCCGAGCTAGAAAGACAAGCTCGAGAGGCA
GAACGTCGCAGGGCGGAGGAAGCTGAGGCTGCTGAGCGTGCACAGAGAGG
ACATGGACGCAGCGGCAGTGAGGTGGATTACGGGATTGAGAAGACCTATC
CCAATGGCAGCATGAAGGGCAAAGGGAAGTTTGCAGAGAAGCAATCCAGC
AAACCAGGTACCTCCGCAGGTCGGACGGCCTTTTCGCCCCCTGGCTCCAA
GAACATCAAGAACACTGAGAAGCCCGAAGCGCGGGCTAAGCAATCACGAG
CACTGGTCAACGTGGTGCGCAATATCCTGCGATACGTCAGCAAGAGCATT
GCAGGCAACCCACTATCATTCGCGCGGACGCTTCTGTTTATGCTCGGCAT
TATAGCCGCATTAAGCCGACAAGACGTGCGGGAGCGCATCCGGAGGATAA
CAGGCTCCGGTTGGCAGAAAATCAAGGGGACGGTTGGGATGGGAGTGAAA
GTGAGCTATATTTGAATGGCCGACGATGGCTCCTACATGTCGGCGTCCCA
GTCGCAACTCCTCTCCTCGTCCACATCCTCATTGTCTCCCTCCAAACTTT
GCTCAAAAACATATAAGAAGGCGTCAAATCTCTATCTAACACTACGGTTA
CAAGAAGCACTTTCAGCCCTTGAGCCTGCGATCACAGTGGTCAGGGGATC
CGACGAGCAGCTCGTCAATGGCGATGATTCTGTCGCGCCCGTTGCTTCAG
CCCAGCCGACCTGGCGGATCAAAGTGTGGAATCTCTACATTACACTCTTG
AGCCAAATCATCGAATTGGGCCCTGAGGAGGGAAAGAAATTGTTTGGACA
GAAAGAATGGAAGGCCATCTCGACCACTGTTCGCGATGGTGAGATCTGGG
AGACCGTTGTACGGACGGGGTATAGAGGTTTGGAGGGATCAGTGGATGCA
GAAGTCGTCCATAACCTGGCAACTCTCTTGTTGAAACATTCGCCATCACA
AAAGCTCAACCAACAACGACTTGAGACGTACCTTTCGTCATACGGACAAC
CTAATCTGGATATTTCAGACCATCTGACTAGTGGCTCATCTACACCACGT
GCAAACGGTGGTACCGATACCCCGAAAGATCTAGCTGCTAGGGTCAAGAT
AATCGAGCTGTTCACCCTACATGTTCTTCCCGCAAACGAAGAATGGGAGT
ATGCGCAGGAATTCATCAACCTGAGCGAAGTCCTCGATGAGGACCGGAAG
GAGTTATTTCTGCAGACGCTAGAAGGCCTGAAGGAAGAGAAACAGCAAGG
GGAGCTGCGCGCCGCTGCCCTCCAGCGGGAAAAGGATGCCGAGCTAGAAA
GACAAGCTCGAGAGGCAGAACGTCGCAGGGCGGAGGAAGCTGAGGCTGCT
GAGCGTGCACAGAGAGGACATGGACGCAGCGGCAGTGAGGTGGATTACGG
GATTGAGAAGACCTATCCCAATGGCAGCATGAAGGGCAAAGGGAAGTTTG
CAGAGAAGCAATCCAGCAAACCAGGTACCTCCGCAGGTCGGACGGCCTTT
TCGCCCCCTGGCTCCAAGAACATCAAGAACACTGAGAAGCCCGAAGCGCG
GGCTAAGCAATCACGAGCACTGGTCAACGTGGTGCGCAATATCCTGCGAT
ACGTCAGCAAGAGCATTGCAGGCAACCCACTATCATTCGCGCGGACGCTT
CTGTTTATGCTCGGCATTATAGCCGCATTAAGCCGACAAGACGTGCGGGA
GCGCATCCGGAGGATAACAGGCTCCGGTTGGCAGAAAATCAAGGGGACGG
TTGGGATGGGAGTGAAAGTGAGCTATATTTGAATGGCCGACGATGGCTCC
TACATGTCGGCGTCCCAGTCGCAACTCCTCTCCTCGTCCACATCCTCATT
GTCTCCCTCCAAACTTTGCTCAAAAACATATAAGAAGGCGTCAAATCTCT
ATCTAACACTACGGTTACAAGAAGCACTTTCAGCCCTTGAGCCTGCGATC
ACAGTGGTCAGGGGATCCGACGAGCAGCTCGTCAATGGCGATGATTCTGT
CGCGCCCGTTGCTTCAGCCCAGCCGACCTGGCGGATCAAAGTGTGGAATC
TCTACATTACACTCTTGAGCCAAATCATCGAATTGGGCCCTGAGGAGGGA
AAGAAATTGTTTGGACAGAAAGAATGGAAGGCCATCTCGACCACTGTTCG
CGATGGTGAGATCTGGGAGACCGTTGTACGGACGGGGTATAGAGGTTTGG
AGGGATCAGTGGATGCAGAAGTCGTCCATAACCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009179-T1.utr5p1 | KJC3_009179-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4769424..4772707 - |
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