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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4798560..4800623- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009187-T1 ID=KJC3_009187-T1|Name=KJC3_009187-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2064bp|location=Sequence derived from alignment at ch6:4798560..4800623- (Aspergillus niger KJC3)
ATGGCTCCTGCACGTACGACTAAAAGGAGACGGGTGAGCCCTCCTGGAGA
TGAAGAACGTGGCTCCAAATCCTCTGGTGGTGCGTCTGCCAGCGACTTCT
ACAACAATGCCGCCGAGTGGGACCTTGAACAAGACTATGAGCAGCGGCCG
CGCAAATTGGGCAAGAAGGACAAGGAACAGACGAGATTGCCTATAAAGAC
CGCGGAAGGTATACAGACTGTGGCAGAACCGGAACCTGAGCCGGAGGCTG
AAGAATCCGACAGCTTTTTGGGTACCGACGACGACGAGGATATGGAGGAT
GCGGATTCCGATGAAGATGAGGAAGAGATTGAAGAAGAAAAGCCAAAGAT
TCCTTTGAAGCTGCAAATTATCCAGACCAAGGAGGAACTTGCACGGCTTG
CTATGTTAATCAACGAAGATCCGGAAGAGAACATGCCGCTGTTCAAGACA
ATGGCCGACATCGTGGAGAGGGGAGAGCATGTTGCGATCCAGAAACTGGC
TCTTGCCGCCCAGGCCGCAGTTTACAAGGACGTTATTCCTGGCTATCGAA
TCCGACCCCTCGGCGACGAAGACATGTCCGCGAAAATTTCCAAGGAAGTG
CGCAAGCTACGGACATTCGAACAATCCCTTCTTTCGAACTACAAGCATTA
CATTCAGAAGCTGGTGGAGCTCACGAAACCAGCCAAGAAGGATGCCCCCC
AGGTGGACCCCGGCTTGAAAAGCATTGCGATTAACTGCGCCTGCAACCTG
CTCCTTTCCGTGGCGCATTTCAACTTCCGTAGCGAGCTCCTGAAGATCCT
CGTCAACCGCCTCGCCCGGAAACAAGTCGATGCCGATTTCGTCAAATGCC
GCGAGACGATGGAAGAGGTTTTTATAAGGGATGAGGATGGAGTTGTGTCA
CTCGAGGCTGTCCGCCTGCTGTCGAAGATGATGAAGGCGAAGGAATTCCG
CATCAATGAGACCGTCCTGGATACCTTCCTCCACCTCCGTCTGCTGTCCG
AATTCTCCCGCAAGGCGTCAAGAGACAGGATCGATCGCGAAGAAGAAGAG
GAGACCCCGCAATTCGGTAAGAAGCCCAAGCAGAAGCGTGAGTTCCGCAC
CAAGCGGGAACGCAAGGTCCAGAAGGAGCGCAAGGCAGTCGAGAAGGATA
TGAAGGAGGCCGACGCCTTGGTGTCCCACGAGGAGAGAGACAAGAATCAA
GCAGAGACATTGAAGCTCGTCTTCGGTGTCTACTTCCGAATCCTCAAGCT
CCGCATTCCGAAGCTCATGGGCCCCGTTCTCGAGGGTCTTGCCAAGTACG
CCCACCTGATCAACCAGGACTTCTTCGGTGACTTGCTGGAAGCACTGAAG
GACCTGATCGGCCATGCCGATCGAGCCGAGGAAGAAGAGGACGAGACAGA
AGAAACCGATGATGCGGAGCCAGCTACGACACGCGACGCCCAGCGCGAAG
CCCTCCTTTGTACCGTCACTGCCTTCGCACTTCTGGAAGGACAAGACGCC
AGCAAGGCCGCCAGCACACTCCACCTCGACCTGAGTTTCTTCGTAAAACA
TCTCTACCGCTCTCTCTACAACCTCTCCATCAATCCCGACGTCGAATACA
ACCCCGACAAATCCCTCCGCCTCCCCGACCCCAACTCCCCCGAAGCGAAC
CCGGCCTGGCGATCCAGGAAGAAGGTCAACTTCCAGACGCCCATGGTTCT
GCTCCTTCGTTGCTTGCAGTCTACACTTATATCCCGCGCACATGGAATGC
CCCCTCCTGTCCGACTAGGCAGTTTCTCCAAGCGACTGATGACGACTTCG
CTTCAACTGCCCGAGAAGTCCGCCCTCGCGACACTGTCGCTCATGAACCA
GGTGGCCAAGCACAACGCACGTCGCATCTCCTCGCTGTGGCACAGTGATG
AGCGCAAGGGAGACGGTGTGTTCAATGCGTACGCTACCGACATTGAGGCG
ACCAATGTCTTCGCGGGCACGATCTGGGAGGGAGAGTTGTTGCGCCAGCA
TTACTGTCCTCAAGTTCGGGATGCCGCTCTGGATGTAGAGAAAATGATTG
CGACGCGGAAATAG back to topCoding sequence (CDS) from alignment at ch6:4798560..4800623- >KJC3_009187-T1 ID=KJC3_009187-T1|Name=KJC3_009187-T1|organism=Aspergillus niger KJC3|type=CDS|length=2064bp|location=Sequence derived from alignment at ch6:4798560..4800623- (Aspergillus niger KJC3)
ATGGCTCCTGCACGTACGACTAAAAGGAGACGGGTGAGCCCTCCTGGAGA
TGAAGAACGTGGCTCCAAATCCTCTGGTGGTGCGTCTGCCAGCGACTTCT
ACAACAATGCCGCCGAGTGGGACCTTGAACAAGACTATGAGCAGCGGCCG
CGCAAATTGGGCAAGAAGGACAAGGAACAGACGAGATTGCCTATAAAGAC
CGCGGAAGGTATACAGACTGTGGCAGAACCGGAACCTGAGCCGGAGGCTG
AAGAATCCGACAGCTTTTTGGGTACCGACGACGACGAGGATATGGAGGAT
GCGGATTCCGATGAAGATGAGGAAGAGATTGAAGAAGAAAAGCCAAAGAT
TCCTTTGAAGCTGCAAATTATCCAGACCAAGGAGGAACTTGCACGGCTTG
CTATGTTAATCAACGAAGATCCGGAAGAGAACATGCCGCTGTTCAAGACA
ATGGCCGACATCGTGGAGAGGGGAGAGCATGTTGCGATCCAGAAACTGGC
TCTTGCCGCCCAGGCCGCAGTTTACAAGGACGTTATTCCTGGCTATCGAA
TCCGACCCCTCGGCGACGAAGACATGTCCGCGAAAATTTCCAAGGAAGTG
CGCAAGCTACGGACATTCGAACAATCCCTTCTTTCGAACTACAAGCATTA
CATTCAGAAGCTGGTGGAGCTCACGAAACCAGCCAAGAAGGATGCCCCCC
AGGTGGACCCCGGCTTGAAAAGCATTGCGATTAACTGCGCCTGCAACCTG
CTCCTTTCCGTGGCGCATTTCAACTTCCGTAGCGAGCTCCTGAAGATCCT
CGTCAACCGCCTCGCCCGGAAACAAGTCGATGCCGATTTCGTCAAATGCC
GCGAGACGATGGAAGAGGTTTTTATAAGGGATGAGGATGGAGTTGTGTCA
CTCGAGGCTGTCCGCCTGCTGTCGAAGATGATGAAGGCGAAGGAATTCCG
CATCAATGAGACCGTCCTGGATACCTTCCTCCACCTCCGTCTGCTGTCCG
AATTCTCCCGCAAGGCGTCAAGAGACAGGATCGATCGCGAAGAAGAAGAG
GAGACCCCGCAATTCGGTAAGAAGCCCAAGCAGAAGCGTGAGTTCCGCAC
CAAGCGGGAACGCAAGGTCCAGAAGGAGCGCAAGGCAGTCGAGAAGGATA
TGAAGGAGGCCGACGCCTTGGTGTCCCACGAGGAGAGAGACAAGAATCAA
GCAGAGACATTGAAGCTCGTCTTCGGTGTCTACTTCCGAATCCTCAAGCT
CCGCATTCCGAAGCTCATGGGCCCCGTTCTCGAGGGTCTTGCCAAGTACG
CCCACCTGATCAACCAGGACTTCTTCGGTGACTTGCTGGAAGCACTGAAG
GACCTGATCGGCCATGCCGATCGAGCCGAGGAAGAAGAGGACGAGACAGA
AGAAACCGATGATGCGGAGCCAGCTACGACACGCGACGCCCAGCGCGAAG
CCCTCCTTTGTACCGTCACTGCCTTCGCACTTCTGGAAGGACAAGACGCC
AGCAAGGCCGCCAGCACACTCCACCTCGACCTGAGTTTCTTCGTAAAACA
TCTCTACCGCTCTCTCTACAACCTCTCCATCAATCCCGACGTCGAATACA
ACCCCGACAAATCCCTCCGCCTCCCCGACCCCAACTCCCCCGAAGCGAAC
CCGGCCTGGCGATCCAGGAAGAAGGTCAACTTCCAGACGCCCATGGTTCT
GCTCCTTCGTTGCTTGCAGTCTACACTTATATCCCGCGCACATGGAATGC
CCCCTCCTGTCCGACTAGGCAGTTTCTCCAAGCGACTGATGACGACTTCG
CTTCAACTGCCCGAGAAGTCCGCCCTCGCGACACTGTCGCTCATGAACCA
GGTGGCCAAGCACAACGCACGTCGCATCTCCTCGCTGTGGCACAGTGATG
AGCGCAAGGGAGACGGTGTGTTCAATGCGTACGCTACCGACATTGAGGCG
ACCAATGTCTTCGCGGGCACGATCTGGGAGGGAGAGTTGTTGCGCCAGCA
TTACTGTCCTCAAGTTCGGGATGCCGCTCTGGATGTAGAGAAAATGATTG
CGACGCGGAAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092629WJ |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR016903 |
| DBxref | InterPro:IPR011501 |
| DBxref | InterPro:IPR005612 |
| DBxref | PFAM:PF07540 |
| DBxref | PFAM:PF03914 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4798560..4800623 - |
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