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KJC3_009189-T2, KJC3_009189-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009189-T2
Unique NameKJC3_009189-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4801969..4804082+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009189-T2 ID=KJC3_009189-T2|Name=KJC3_009189-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2114bp|location=Sequence derived from alignment at ch6:4801969..4804082+ (Aspergillus niger KJC3)
GCGAGCTCGATTCGGAGATGCGAAGTTTCCCCATCCAGTCATTCCAGCAG
CCGGATTAACATCACATCTGTAAACTCCTCACCTTGTAGCTAGTGTGTTC
ACGGCTATCAACCTTTTGCAATCTTCACTTTCTCGTTGCCATCCTGACGA
ACCCCTACACCCCCTCCATCAGTCAGGATCTTCCCCGCAGGCCACTGCCT
GCCTCACCCCACCATGCCGCCTTACTCAACAGCTCAAAAGCAATGTATAA
TGCAATTCGTGAACCTCACCCAAGCAAAGGATGCAGTAGCCGCAAAGGTA
CATATTGTCTCATTGCTTCTTTTGCTTCTCCTTCCGCAGATGCCATATCG
TCCAACCAGTCTTATCTGCGCTCATCACGTGTTCCTCCATGACTGACTTC
TCGCATGCATATAGTTCTTGAAAGCAGCTCGCTGGAATGTGGAGCAAGCT
CTTGATGCGTGAGTATAGAATCTTTTTGTGTTCTATTCTCTCTCTTTACA
TCTTGCTATGCTATTGCGTTTCCACTCTTGCGGTCGCGGTTCAAGGGACC
GATCATCTTATACCTCGCTTGGTCATTTCAATACGTTAGGCCTGGCGACG
TCTCATCTGTCTGTATCCCTCGTCCAGCGGGACTGAATCAAGGTACTGCT
AGGTGTTGGTGCAAAGCCATCCTAAAAACACCTCATTGTCCACACATGAA
CGCATGCCGTCGGGCGGAGACGGCCGAAGTCGTAAATCTGACGCTGTCAG
ATGTCACGCTGTCGCATGCGATGTGCAGTAAATCGACTGTCAATCAAGTT
TCACTCACCTCAGAATGTTTTACCTGCGGCAGCTTCAGACAAGAGACGTC
AACAAGCGTGCAGTATGTCTGATATCAAATGTCGAAATCGACGTCTTCCA
TTCAGATTTTCTCGCACTTTACCTGGAATTCGTGCATTAAAGAAGGCTGC
ACTGAGGTCTATTTCCCAATTATTTTAATCATACAAGTACCTCTCTCTTC
GCGGAATGCCTACCTCAAGACCGAAGAAGAACGGGACATCCTGCTACAAT
TGAGACCAGCCCAGCCTGCGTATTGAAATCCAAGCATGCATTAGAAATCA
TCCACACTTGGCATTCTTATATCCTCTGCTTCATACACTCACCAACCATG
AGATTCAACCAACTGATCTCTAACAGTCGCTAATATCAACCTCACCTCCA
GATACTTCCAAAGCTCCTCCGGTGCCGGCGGTAGCACATCCTCATTGAGC
AAGATCTTCGACAGTTATAGAGGTTCGCGCACCCTCCCACCACCATGAAA
TCTTAAAACTAACGTCCACCAGATGCCCCAGAAGACAACCCCGACGGGAT
CGGCATCGAAGGAGCCATGAAATACCTCGGGGACATCAAAGTCGGCCTCG
ACGAAGTGGCATGCCTAGGGATTGCCGAGCTACTCAAATCCCCCTCAATG
GGCGAATTCACCCGCGAAGGCTTTATCAACGGCTGGAGAATAACTGGGTA
AATACCCTACTTCCTCTCGCCATCCCACCCCCACCTACATACAATACAAG
CTAATATATGGATATAGATCCGACTCCCTCGACAAAATGATCGCCCACGC
CGCCGACATGCGCGCGCGCATCCCCATCCAACCGGACCTCTTCCGTCGCG
TCTACCGCTTCACCTTCCCCCTATGCCGCATGCAAGGCCAGCGGAATCTG
CAGTTCGAGATCGCGGCGGAGCAATGGCGCCTGTTCTTCACGCCGCAGAA
TGGCGGGGTGCAGTGGAACACGAGCAAGACTCCGTGGTTGGATTGGTGGA
TTGAGTTCCTGGAGGAGAGGGGGAAGAGGCCCGTGAATAAGGATCTGTGG
GAGCAGGTGGAGGTGTTTATGCGGAAGACGCTGGAGGATGAGAACTTTGG
GTGGTGGAGTGCGGATGGGGCATGGCCCGGGGCGTTGGATGATTTTGTGG
AGTGGGTGCAGAAGAAGAGGGGGAAGGAAGCGGGGGAAGATATGGAGGTT
GAGTAGCGGATGTTTTCTTTATTATTCTCGATATTTGAATCAATACGTTG
TCTACATGTGGTCAGGTAGATGAATGGATGGGGTTATAATATTACTATTA
CTGGTGTAGTGGTG
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Coding sequence (CDS) from alignment at ch6:4801969..4804082+

>KJC3_009189-T2 ID=KJC3_009189-T2|Name=KJC3_009189-T2|organism=Aspergillus niger KJC3|type=CDS|length=3564bp|location=Sequence derived from alignment at ch6:4801969..4804082+ (Aspergillus niger KJC3)
ATGTCACGCTGTCGCATGCGATGTGCAGTAAATCGACTGTCAATCAAGTT
TCACTCACCTCAGAATGTTTTACCTGCGGCAGCTTCAGACAAGAGACGTC
AACAAGCGTGCAGTATGTCTGATATCAAATGTCGAAATCGACGTCTTCCA
TTCAGATTTTCTCGCACTTTACCTGGAATTCGTGCATTAAAGAAGGCTGC
ACTGAGATACTTCCAAAGCTCCTCCGGTGCCGGCGGTAGCACATCCTCAT
TGAGCAAGATCTTCGACAGTTATAGAGATGCCCCAGAAGACAACCCCGAC
GGGATCGGCATCGAAGGAGCCATGAAATACCTCGGGGACATCAAAGTCGG
CCTCGACGAAGTGGCATGCCTAGGGATTGCCGAGCTACTCAAATCCCCCT
CAATGGGCGAATTCACCCGCGAAGGCTTTATCAACGGCTGGAGAATAACT
GGATCCGACTCCCTCGACAAAATGATCGCCCACGCCGCCGACATGCGCGC
GCGCATCCCCATCCAACCGGACCTCTTCCGTCGCGTCTACCGCTTCACCT
TCCCCCTATGCCGCATGCAAGGCCAGCGGAATCTGCAGTTCGAGATCGCG
GCGGAGCAATGGCGCCTGTTCTTCACGCCGCAGAATGGCGGGGTGCAGTG
GAACACGAGCAAGACTCCGTGGTTGGATTGGTGGATTGAGTTCCTGGAGG
AGAGGGGGAAGAGGCCCGTGAATAAGGATCTGTGGGAGCAGGTGGAGGTG
TTTATGCGGAAGACGCTGGAGGATGAGAACTTTGGGTGGTGGAGTGCGGA
TGGGGCATGGCCCGGGGCGTTGGATGATTTTGTGGAGTGGGTGCAGAAGA
AGAGGGGGAAGGAAGCGGGGGAAGATATGGAGGTTGAGTAGATGTCACGC
TGTCGCATGCGATGTGCAGTAAATCGACTGTCAATCAAGTTTCACTCACC
TCAGAATGTTTTACCTGCGGCAGCTTCAGACAAGAGACGTCAACAAGCGT
GCAGTATGTCTGATATCAAATGTCGAAATCGACGTCTTCCATTCAGATTT
TCTCGCACTTTACCTGGAATTCGTGCATTAAAGAAGGCTGCACTGAGATA
CTTCCAAAGCTCCTCCGGTGCCGGCGGTAGCACATCCTCATTGAGCAAGA
TCTTCGACAGTTATAGAGATGCCCCAGAAGACAACCCCGACGGGATCGGC
ATCGAAGGAGCCATGAAATACCTCGGGGACATCAAAGTCGGCCTCGACGA
AGTGGCATGCCTAGGGATTGCCGAGCTACTCAAATCCCCCTCAATGGGCG
AATTCACCCGCGAAGGCTTTATCAACGGCTGGAGAATAACTGGATCCGAC
TCCCTCGACAAAATGATCGCCCACGCCGCCGACATGCGCGCGCGCATCCC
CATCCAACCGGACCTCTTCCGTCGCGTCTACCGCTTCACCTTCCCCCTAT
GCCGCATGCAAGGCCAGCGGAATCTGCAGTTCGAGATCGCGGCGGAGCAA
TGGCGCCTGTTCTTCACGCCGCAGAATGGCGGGGTGCAGTGGAACACGAG
CAAGACTCCGTGGTTGGATTGGTGGATTGAGTTCCTGGAGGAGAGGGGGA
AGAGGCCCGTGAATAAGGATCTGTGGGAGCAGGTGGAGGTGTTTATGCGG
AAGACGCTGGAGGATGAGAACTTTGGGTGGTGGAGTGCGGATGGGGCATG
GCCCGGGGCGTTGGATGATTTTGTGGAGTGGGTGCAGAAGAAGAGGGGGA
AGGAAGCGGGGGAAGATATGGAGGTTGAGTAGATGTCACGCTGTCGCATG
CGATGTGCAGTAAATCGACTGTCAATCAAGTTTCACTCACCTCAGAATGT
TTTACCTGCGGCAGCTTCAGACAAGAGACGTCAACAAGCGTGCAGTATGT
CTGATATCAAATGTCGAAATCGACGTCTTCCATTCAGATTTTCTCGCACT
TTACCTGGAATTCGTGCATTAAAGAAGGCTGCACTGAGATACTTCCAAAG
CTCCTCCGGTGCCGGCGGTAGCACATCCTCATTGAGCAAGATCTTCGACA
GTTATAGAGATGCCCCAGAAGACAACCCCGACGGGATCGGCATCGAAGGA
GCCATGAAATACCTCGGGGACATCAAAGTCGGCCTCGACGAAGTGGCATG
CCTAGGGATTGCCGAGCTACTCAAATCCCCCTCAATGGGCGAATTCACCC
GCGAAGGCTTTATCAACGGCTGGAGAATAACTGGATCCGACTCCCTCGAC
AAAATGATCGCCCACGCCGCCGACATGCGCGCGCGCATCCCCATCCAACC
GGACCTCTTCCGTCGCGTCTACCGCTTCACCTTCCCCCTATGCCGCATGC
AAGGCCAGCGGAATCTGCAGTTCGAGATCGCGGCGGAGCAATGGCGCCTG
TTCTTCACGCCGCAGAATGGCGGGGTGCAGTGGAACACGAGCAAGACTCC
GTGGTTGGATTGGTGGATTGAGTTCCTGGAGGAGAGGGGGAAGAGGCCCG
TGAATAAGGATCTGTGGGAGCAGGTGGAGGTGTTTATGCGGAAGACGCTG
GAGGATGAGAACTTTGGGTGGTGGAGTGCGGATGGGGCATGGCCCGGGGC
GTTGGATGATTTTGTGGAGTGGGTGCAGAAGAAGAGGGGGAAGGAAGCGG
GGGAAGATATGGAGGTTGAGTAGATGTCACGCTGTCGCATGCGATGTGCA
GTAAATCGACTGTCAATCAAGTTTCACTCACCTCAGAATGTTTTACCTGC
GGCAGCTTCAGACAAGAGACGTCAACAAGCGTGCAGTATGTCTGATATCA
AATGTCGAAATCGACGTCTTCCATTCAGATTTTCTCGCACTTTACCTGGA
ATTCGTGCATTAAAGAAGGCTGCACTGAGATACTTCCAAAGCTCCTCCGG
TGCCGGCGGTAGCACATCCTCATTGAGCAAGATCTTCGACAGTTATAGAG
ATGCCCCAGAAGACAACCCCGACGGGATCGGCATCGAAGGAGCCATGAAA
TACCTCGGGGACATCAAAGTCGGCCTCGACGAAGTGGCATGCCTAGGGAT
TGCCGAGCTACTCAAATCCCCCTCAATGGGCGAATTCACCCGCGAAGGCT
TTATCAACGGCTGGAGAATAACTGGATCCGACTCCCTCGACAAAATGATC
GCCCACGCCGCCGACATGCGCGCGCGCATCCCCATCCAACCGGACCTCTT
CCGTCGCGTCTACCGCTTCACCTTCCCCCTATGCCGCATGCAAGGCCAGC
GGAATCTGCAGTTCGAGATCGCGGCGGAGCAATGGCGCCTGTTCTTCACG
CCGCAGAATGGCGGGGTGCAGTGGAACACGAGCAAGACTCCGTGGTTGGA
TTGGTGGATTGAGTTCCTGGAGGAGAGGGGGAAGAGGCCCGTGAATAAGG
ATCTGTGGGAGCAGGTGGAGGTGTTTATGCGGAAGACGCTGGAGGATGAG
AACTTTGGGTGGTGGAGTGCGGATGGGGCATGGCCCGGGGCGTTGGATGA
TTTTGTGGAGTGGGTGCAGAAGAAGAGGGGGAAGGAAGCGGGGGAAGATA
TGGAGGTTGAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DCN1_1KJC3_009189Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009189-T2KJC3_009189-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009189-T2.utr5p1KJC3_009189-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_009189-T2.utr5p2KJC3_009189-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009189-T2.utr5p3KJC3_009189-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009189-T2.exon1KJC3_009189-T2.exon1Aspergillus niger KJC3exon
KJC3_009189-T2.exon2KJC3_009189-T2.exon2Aspergillus niger KJC3exon
KJC3_009189-T2.exon3KJC3_009189-T2.exon3Aspergillus niger KJC3exon
KJC3_009189-T2.exon4KJC3_009189-T2.exon4Aspergillus niger KJC3exon
KJC3_009189-T2.exon5KJC3_009189-T2.exon5Aspergillus niger KJC3exon
KJC3_009189-T2.exon6KJC3_009189-T2.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009189-T2.cdsKJC3_009189-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009189-T2.utr3p1KJC3_009189-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR005176
DBxrefPFAM:PF03556
Product variant 2
ProductScaffold-type E3 ligase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4801969..4804082 +
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