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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4806385..4808927+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009191-T1 ID=KJC3_009191-T1|Name=KJC3_009191-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2543bp|location=Sequence derived from alignment at ch6:4806385..4808927+ (Aspergillus niger KJC3)
TAATTGTCCCATGTCCACCTCCCGATGCCTAGCAATATCTGTCATTAATT
TCTGCACTTTGCAGGCATCATCTGTATTGGGATATTATATATATGGTACT
AGGCTCATTATGATCCTTTTCCAGGCTTATCTCACAAAACCGGTATTTCA
AGATGACCTATTTCCTAAAGAGGAAAGGGACCAGCCCAAAAGGTGCACGC
CGAGTGCAGCCTGGAACAGAAAATAACGGAGCTTGTATCCAGAGTATCAC
TCATCCTGGGTATTTTTCTGATTCTATATCTGCTATGCACATTTCCTATC
CACTAACAACTGCACAGGTAGAAGAATGTTGCTCATATAATGCTGCCCTT
GTAGAAATGAATGCTTCATCACGGCCCTAGGCCTTGCCATTACTGCACTC
CCAATCTATAGGCTATGTGCATGCCAATCTGGCGTTCACGATGCTCCTGT
TACAGCGCTGGCAAGCACTTCATTATGAATGCTCGTTTGAAGCGTTTGAA
TGCCGAGACCATGGACCCGGTCAGTGGTGAAGAGGACTGACACGTCCACG
TCTATCACAATGTCTCAACAAACACTCAACCGTGTTTCCTTTCCTCACAG
GAAGCCTCTCCATCATCGGAATTCATCCTTGGGGTCTTCATTTCCATCGT
TGTGATAGACCTGGACATCTGATCTACTTAAGGACCATGTCTTCTGATAC
TCCTGTGGACGAGGGACGTGGAAGCCCATCCGAAAGGTCAGACTCACCAC
CCTCTCAGCTAGTCTTCCTTCCACCCCCCAATAGCGTGCCTTCCTCCGTG
AGATGGGATAAGCATCCTACTTTCGAACCGGTTGTTGATCCGTTTTTCAA
CCTTGTGGCTCGTCGAGAGGACGGCAGACCCCGTCTCTTCCCTCCGTTTT
CGGGGTGGAATGATGACGAACCTAGAACTTGCGGTGACCCCTATTGCAAA
CACGATGTCGTTGTCCGTGAGTATGCACTTGACAAGCACGAGACATGCGA
GTCCTGCGGTCTGGTTCCGCCGTTCGGCTGGTTCTATCGCTGTGGTGTAG
ACATCACCGGCTTCTCTCACCGCATGGGTCCAGGCCAAACCCCGGTTCTC
AGTCCTTGGATATCCGACGCTATCACGGCTGGTCATTACACAGGAATACA
GAAGAATATTCTAATGTGGCAGAAAACCAGAGTCCTGCAGACAGTTGCCG
CGGAACACACCGAACACCTTGTTGCTTTCCCTGTAACAGAAGTCATCTAT
GGCATAGGGGATGACGATGACGACGAAAATCCTCACGTGGATTTCGTTGA
AGACGTCTCTCATGCAGATTCAGACCAGTTTGCCGAAGACCGCCCCCTGA
TCCAATCGTCAGTCTATCCTCCTTGCAGCCATCGCGCATGCCATAACTGT
GCACCTTATCTCCAAGAAAGAGCCTGGCTCAGCATTGACGAGGTATGCAG
AGACACGACTGTCAGAGCTCCCAGCCAGTGGGATTTGCGTGACCGCAGTA
TCTCCGATGCAAACGTTGTCAGGAACTTGGGACTCCGACGTTTCTCACCA
TCACGTCCCGGAGCTGAACCAAGCACATCGCTCACTGAGGACAGTAAAAC
ACCATCGGCTCTGTTGAAGAAGCTTGTGGATAAAGCATCCAAGAGTTCCG
GTTCGTCTAAACCTACCAAACCGACCACCACTGTTCTTCCGGCACTTACT
GCCCAAATTGCTGGGTCCGTTGCTGGGTGTTTTACCAGCGCTCCTCCTAC
CGCATCAAGTCTTGCTCGGCCTATCGAATCATTCGCTGCTCCATCTACTC
AGCCGTCTGCTGCACCACTCACCGCGCCCCCTCCGCCTCTTCATCTTGAA
ATTCCCGAGTGGCTCATGGCAGGTGCCAGTTCTTCTACCTCACGCTCCAC
AAACTCAGACACTAGGAACTCGCAAGCAAGGTCATCGCAGGCAGGGTCGT
CGCGAGCAGGTCCGTCTGGAACGTCTCGACGGACCCCTGCTATCTCACCG
CAGTCAGTGAGTGCCCAAGGCGCGTGGCACAGTATTAACAAACATCCTCG
CCGCCCGAATCTCAGTGTTGGTCGCCCGCGTACGATCGTTAGAGTGCCGG
CAACCGTGAATGAAGAATATGAGCAAGATTATTGGTCTGGAGGAGATCAT
GAAGATGATGATGATTACGACGAGGAGGACGAGGACGATGAGTCGGGTGG
TTGTCTCCTCGATCTCGCTTCCCGTGCAGAGGAGGACAGGGAACACCGTT
CCTGAAGTAACGATCGACAAAGAATACGAGCGTCCAAAAAGCAACGAAAT
ATTATTGGCATACAGCCAGAAGGGTATTCTGCTGTGGTGACGGCAATCAA
GTTGCTATTACGAATGGCTCCGATCTTCGCGGGATGCGCACGGAATCTTA
GTTCCTGCGTGAACACTACTTTGCCATAATGTGGGGGTATGAAAATTTCC
TTTTCATGTAATCTCTAGTATGCCTGATCAGAATATGCCGACAGGTCAAT
GATCACAGCAAATTCTCAGTACTAATCATTCATATCATAAAAG back to topCoding sequence (CDS) from alignment at ch6:4806385..4808927+ >KJC3_009191-T1 ID=KJC3_009191-T1|Name=KJC3_009191-T1|organism=Aspergillus niger KJC3|type=CDS|length=1569bp|location=Sequence derived from alignment at ch6:4806385..4808927+ (Aspergillus niger KJC3)
ATGTCTTCTGATACTCCTGTGGACGAGGGACGTGGAAGCCCATCCGAAAG
GTCAGACTCACCACCCTCTCAGCTAGTCTTCCTTCCACCCCCCAATAGCG
TGCCTTCCTCCGTGAGATGGGATAAGCATCCTACTTTCGAACCGGTTGTT
GATCCGTTTTTCAACCTTGTGGCTCGTCGAGAGGACGGCAGACCCCGTCT
CTTCCCTCCGTTTTCGGGGTGGAATGATGACGAACCTAGAACTTGCGGTG
ACCCCTATTGCAAACACGATGTCGTTGTCCGTGAGTATGCACTTGACAAG
CACGAGACATGCGAGTCCTGCGGTCTGGTTCCGCCGTTCGGCTGGTTCTA
TCGCTGTGGTGTAGACATCACCGGCTTCTCTCACCGCATGGGTCCAGGCC
AAACCCCGGTTCTCAGTCCTTGGATATCCGACGCTATCACGGCTGGTCAT
TACACAGGAATACAGAAGAATATTCTAATGTGGCAGAAAACCAGAGTCCT
GCAGACAGTTGCCGCGGAACACACCGAACACCTTGTTGCTTTCCCTGTAA
CAGAAGTCATCTATGGCATAGGGGATGACGATGACGACGAAAATCCTCAC
GTGGATTTCGTTGAAGACGTCTCTCATGCAGATTCAGACCAGTTTGCCGA
AGACCGCCCCCTGATCCAATCGTCAGTCTATCCTCCTTGCAGCCATCGCG
CATGCCATAACTGTGCACCTTATCTCCAAGAAAGAGCCTGGCTCAGCATT
GACGAGGTATGCAGAGACACGACTGTCAGAGCTCCCAGCCAGTGGGATTT
GCGTGACCGCAGTATCTCCGATGCAAACGTTGTCAGGAACTTGGGACTCC
GACGTTTCTCACCATCACGTCCCGGAGCTGAACCAAGCACATCGCTCACT
GAGGACAGTAAAACACCATCGGCTCTGTTGAAGAAGCTTGTGGATAAAGC
ATCCAAGAGTTCCGGTTCGTCTAAACCTACCAAACCGACCACCACTGTTC
TTCCGGCACTTACTGCCCAAATTGCTGGGTCCGTTGCTGGGTGTTTTACC
AGCGCTCCTCCTACCGCATCAAGTCTTGCTCGGCCTATCGAATCATTCGC
TGCTCCATCTACTCAGCCGTCTGCTGCACCACTCACCGCGCCCCCTCCGC
CTCTTCATCTTGAAATTCCCGAGTGGCTCATGGCAGGTGCCAGTTCTTCT
ACCTCACGCTCCACAAACTCAGACACTAGGAACTCGCAAGCAAGGTCATC
GCAGGCAGGGTCGTCGCGAGCAGGTCCGTCTGGAACGTCTCGACGGACCC
CTGCTATCTCACCGCAGTCAGTGAGTGCCCAAGGCGCGTGGCACAGTATT
AACAAACATCCTCGCCGCCCGAATCTCAGTGTTGGTCGCCCGCGTACGAT
CGTTAGAGTGCCGGCAACCGTGAATGAAGAATATGAGCAAGATTATTGGT
CTGGAGGAGATCATGAAGATGATGATGATTACGACGAGGAGGACGAGGAC
GATGAGTCGGGTGGTTGTCTCCTCGATCTCGCTTCCCGTGCAGAGGAGGA
CAGGGAACACCGTTCCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009191-T1.utr3p1 | KJC3_009191-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4806385..4808927 + |
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