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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4872917..4874586+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009209-T1 ID=KJC3_009209-T1|Name=KJC3_009209-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1670bp|location=Sequence derived from alignment at ch6:4872917..4874586+ (Aspergillus niger KJC3)
GGACTCTCGAACCGTGATACTGTTAACACGATACTTTGTCTCGGTATTCT
ATTAAGCTTACTTCGAGTATATAATTCTCAAGACGTACAGATTGTAGGCT
TTAGGACGCCATGAGAGTGTACACTAGAAGAAGACAGCAGGCGGGGTACT
ATATGCAGTATACTGTCTTGGGTGTTCTGCCATGGAATCGGATATGCTCC
GAGAGAGCAGCTGTTGTGTGACTTTGACTGACCGCAAGGGATGACATCCT
CAGTCTCTTTGTCTGGTCGCATCGACCGCCTCTACCCCGCACAACTCCCA
CCAACAAGTCAAACCCCCTCAGTATCATGCAGCAGAATTCGCCATTGACC
ACTCATCAGCTGCAGGAATACGAATGCATCGAGCTCGTCTCGGTCGACGA
TGTCTGTCCCTCGATACGAGGGCTCATGAGTGTCAGTATATGAGGTTGAT
CCCTTCCCTCTTCTCTGTCGGGTGAAGCTCCATAGTCCTTAGAGTCTGTC
ACTGCCATCATGCGTCTCCTCAACAAGGTTGCTCTCGTCACAGGCTCGTC
TTCGGGCATTGGACGGGCCATCGCTCTGCGTTATGCTCGGGAAGGAGCCA
AGGTTGCCTGTGCGGACATCACTCCGACTGCACGCTCGCCGGTGCCGAAC
GAACTAGACATTACTACCCACGATGCGATCAGTCAAGAGGGCGGGCAGGC
TTTCTTCCTCCAAACGGATGTGGGCGATGCATCCCAGATGGAAAATGCAG
TGCTGAAGACTGCACAACAGTTTGGTCGGTTGGATATGTATGTTCGTTGT
AGAAGTCCCCTTATCTCGGCAACCGAAACAACTGACAATCTATTCGCAGT
ATGGTCAACAATGCAGGGGTCTCTCTTGAATCTCGCACCCCGGCTCGCAT
CCACGAAACCACCAATGAACTGTACGACACTACCATGCGGATCAATACGC
GCTCGGTCTTTCTGGGCAGCAAGTACGCCATCACACAGATGCTGAAGCAG
GATCCGCATCCTTCGGGCGATCGGGGATGGATCATCAATCTGTCATCCAT
TCTTGGGATCGTGGCAGCGACAGAGAATCGTAGGTCAACCCGTTCCAGAT
GCGACAAGGTTGGTGACGATCATGCTAAGCTGTGATAGCATCTTACTGTG
CCTCCAAGGGGGCTGTCAGCAATCTCACGCGTCAGGTGGCGTTGGATTAT
GCGCGCGATCGCATTCATGCGAATGCTATTTGTCCGGGATGTAGGTCTCT
TATCGTGTTTGCAGATTGTTGACTGTTGACTCTATTGTGGGCGGTGACTG
ACTGACAAGGGATGTAGATACCCGGACAGCCATCTATGAGGAGACAACGG
AGTATATGCACGCCGCGGCGGACTTGATCCGACGACATCCCTTTAATGGG
CCTGGATTACCGGATGACATTGCGCGGGTGGCGGTGGTGCTGGCGAGCGA
GGATGCCAGCTGGATGACGGGAGCCGTGGTTCCGGTTGATGGAGGGTATA
CTGCGCGGTGAGATCTCACCTGGGAAAATTCTAAGTGACAGCCATTGTAG
GTAGAGCCTAGCGAGAGCGAACATTTAATGTCACGGAGTTCTCAGAGTCG
CTCGATAGTACTAGCATCTGTGGAGAACATTATATATATATAACGGCTTC
GGCCTTGGCTGCGATGCAGG back to topCoding sequence (CDS) from alignment at ch6:4872917..4874586+ >KJC3_009209-T1 ID=KJC3_009209-T1|Name=KJC3_009209-T1|organism=Aspergillus niger KJC3|type=CDS|length=1926bp|location=Sequence derived from alignment at ch6:4872917..4874586+ (Aspergillus niger KJC3)
ATGCGTCTCCTCAACAAGGTTGCTCTCGTCACAGGCTCGTCTTCGGGCAT
TGGACGGGCCATCGCTCTGCGTTATGCTCGGGAAGGAGCCAAGGTTGCCT
GTGCGGACATCACTCCGACTGCACGCTCGCCGGTGCCGAACGAACTAGAC
ATTACTACCCACGATGCGATCAGTCAAGAGGGCGGGCAGGCTTTCTTCCT
CCAAACGGATGTGGGCGATGCATCCCAGATGGAAAATGCAGTGCTGAAGA
CTGCACAACAGTTTGGTCGGTTGGATATTATGGTCAACAATGCAGGGGTC
TCTCTTGAATCTCGCACCCCGGCTCGCATCCACGAAACCACCAATGAACT
GTACGACACTACCATGCGGATCAATACGCGCTCGGTCTTTCTGGGCAGCA
AGTACGCCATCACACAGATGCTGAAGCAGGATCCGCATCCTTCGGGCGAT
CGGGGATGGATCATCAATCTGTCATCCATTCTTGGGATCGTGGCAGCGAC
AGAGAATCCATCTTACTGTGCCTCCAAGGGGGCTGTCAGCAATCTCACGC
GTCAGGTGGCGTTGGATTATGCGCGCGATCGCATTCATGCGAATGCTATT
TGTCCGGGATGTAGGTCTCTTATCGTGTTTGCAGATTGTTGAATGCGTCT
CCTCAACAAGGTTGCTCTCGTCACAGGCTCGTCTTCGGGCATTGGACGGG
CCATCGCTCTGCGTTATGCTCGGGAAGGAGCCAAGGTTGCCTGTGCGGAC
ATCACTCCGACTGCACGCTCGCCGGTGCCGAACGAACTAGACATTACTAC
CCACGATGCGATCAGTCAAGAGGGCGGGCAGGCTTTCTTCCTCCAAACGG
ATGTGGGCGATGCATCCCAGATGGAAAATGCAGTGCTGAAGACTGCACAA
CAGTTTGGTCGGTTGGATATTATGGTCAACAATGCAGGGGTCTCTCTTGA
ATCTCGCACCCCGGCTCGCATCCACGAAACCACCAATGAACTGTACGACA
CTACCATGCGGATCAATACGCGCTCGGTCTTTCTGGGCAGCAAGTACGCC
ATCACACAGATGCTGAAGCAGGATCCGCATCCTTCGGGCGATCGGGGATG
GATCATCAATCTGTCATCCATTCTTGGGATCGTGGCAGCGACAGAGAATC
CATCTTACTGTGCCTCCAAGGGGGCTGTCAGCAATCTCACGCGTCAGGTG
GCGTTGGATTATGCGCGCGATCGCATTCATGCGAATGCTATTTGTCCGGG
ATGTAGGTCTCTTATCGTGTTTGCAGATTGTTGAATGCGTCTCCTCAACA
AGGTTGCTCTCGTCACAGGCTCGTCTTCGGGCATTGGACGGGCCATCGCT
CTGCGTTATGCTCGGGAAGGAGCCAAGGTTGCCTGTGCGGACATCACTCC
GACTGCACGCTCGCCGGTGCCGAACGAACTAGACATTACTACCCACGATG
CGATCAGTCAAGAGGGCGGGCAGGCTTTCTTCCTCCAAACGGATGTGGGC
GATGCATCCCAGATGGAAAATGCAGTGCTGAAGACTGCACAACAGTTTGG
TCGGTTGGATATTATGGTCAACAATGCAGGGGTCTCTCTTGAATCTCGCA
CCCCGGCTCGCATCCACGAAACCACCAATGAACTGTACGACACTACCATG
CGGATCAATACGCGCTCGGTCTTTCTGGGCAGCAAGTACGCCATCACACA
GATGCTGAAGCAGGATCCGCATCCTTCGGGCGATCGGGGATGGATCATCA
ATCTGTCATCCATTCTTGGGATCGTGGCAGCGACAGAGAATCCATCTTAC
TGTGCCTCCAAGGGGGCTGTCAGCAATCTCACGCGTCAGGTGGCGTTGGA
TTATGCGCGCGATCGCATTCATGCGAATGCTATTTGTCCGGGATGTAGGT
CTCTTATCGTGTTTGCAGATTGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009209-T1.utr5p1 | KJC3_009209-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009209-T1.utr3p1 | KJC3_009209-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4872917..4874586 + |
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