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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4880952..4882608- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009212-T1 ID=KJC3_009212-T1|Name=KJC3_009212-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1657bp|location=Sequence derived from alignment at ch6:4880952..4882608- (Aspergillus niger KJC3)
ATCACGTGCTACCGATAGCGGCCCCTGAACCAAACCAAACGTAAACGTTC
CTCCATCCAAGCCGGGGATATCATCGTCTCCGAAGCTTATCAGTCAATTG
CGCCGCCCACACGATAAGCGTATCCAGGAACGCCGTCGGTTTACGTATCA
CCATGTCTGCGCTTCAGACTAGCTTCATCCTTCGCTTCAGCCTCCGCCAG
CTAGCTCCATGATGATACATGATTCAATATGAGTCATGCAACAATAAGCC
ATCCATCGATATGATGGTCAAAATATCCTCATGAGGATGCTACAAAGCTT
CTAACTATATAAACCACAATGACAGCCTTCAACCACCATGGCATACTCTC
CAAGCCACCACCCGCTCTAATTCATGACCACGACGTCCACAACACCACCA
TCAACAATGACCACCACACCAACAACCTACCTCCCACCCCCCCTCCCCAC
AACCTCTATAACATCTCTCATCCTCTCCCTCTCCCTCCCCGCACCAACAA
CCATCTCGCCCCTAAACGTCTCCGCCGCCTTCCACACAATCTACCTCATC
CACTTCGACGCCTCCACCGCAGCATCAGCAACACCCTCAATCCCCGCCCG
CAATGACCCCGACGGCAGCATCACCCTCGTCCTGCGCATCTCGGGTGCGC
AAATCCCCACCATCAAGACCCTCAACGAAGTCGCCGTTATGACCTGGGTA
CGGCGGAACACAAATATCCCCGTCCCAGCGGTGATCGCGTACTCGGCGAG
TAGGGATAACCCCCTCGGGTATGAGTTCACCTTGTTAGAAAGGGTACCGG
GGGTGTCTGTTGCAGAGGTATATGATACTCTTGATGAGGGAAGGAAAATG
AAGCTTGTGGAGCAGTTGGCGGGGTATGTGGTTGAGTTGCATAATCGTCC
GTGGGAGGGGGGGTATGTGGGGGGATTGAGATTATCACATGGTGGTGATA
GGGAGGGGAAGAAGGAGGTGGAGGAGGAGATAGTGCGTGGTCCGCCTATT
GAAGAGACGTACTGGCAGGTGCCGGATTTGGAAACATACTGGTCTGGGAC
GGACGAGACATTGGAAACATTGAATCCGTTCCAGAGTGATGGGTATGCAA
GCTACACGGGGTATAATATTGCTTGTGTGGAGCGATATATCCATGCTATT
AGCATCCATCCATCGCTGTCTGCGCATAGGGATCTCATTCCTCGGTTGGA
GCAGTTCATCTCAGTCCTGGAATCAGATGATAACTTGAACAATGTACCAT
ATGTATTGGCACATAAGGACCTCCACTTCGCGAACATCATGTGCGATCCA
TCGTCTCCCGAGTGTCCCATCACTGCCGTGCTGGACTGGGAGTTTGCGAG
TGTGGTGCCGGCGCCGCGGTGGAATCCGGTGCGGGCGTTCCTGTGGAATT
ACCGGTATGGGGCGGAGGATAAGGCGGAGAGGGATCGGTTGGAGAGGGTG
TTTGAGGAGGTTTGTAAGAGAAGAGGGGAGGGGAGGGTGTTGGAGGGGAT
GAGGTTAAGTGAGAGGCAGGAGAGGATGCAGAAGGTGGTGAATCATGTTA
GGGCTATTGTGGAGGTGGGGATACGGAATCCAGGGGAGGAAGGAGAAAGG
AAAGTGAGGGGGTGGAGGGGGATGGTGGAGGAGACGTTGAAGGTATTCAA
TGTGTGA back to topCoding sequence (CDS) from alignment at ch6:4880952..4882608- >KJC3_009212-T1 ID=KJC3_009212-T1|Name=KJC3_009212-T1|organism=Aspergillus niger KJC3|type=CDS|length=1284bp|location=Sequence derived from alignment at ch6:4880952..4882608- (Aspergillus niger KJC3)
ATGACCACGACGTCCACAACACCACCATCAACAATGACCACCACACCAAC
AACCTACCTCCCACCCCCCCTCCCCACAACCTCTATAACATCTCTCATCC
TCTCCCTCTCCCTCCCCGCACCAACAACCATCTCGCCCCTAAACGTCTCC
GCCGCCTTCCACACAATCTACCTCATCCACTTCGACGCCTCCACCGCAGC
ATCAGCAACACCCTCAATCCCCGCCCGCAATGACCCCGACGGCAGCATCA
CCCTCGTCCTGCGCATCTCGGGTGCGCAAATCCCCACCATCAAGACCCTC
AACGAAGTCGCCGTTATGACCTGGGTACGGCGGAACACAAATATCCCCGT
CCCAGCGGTGATCGCGTACTCGGCGAGTAGGGATAACCCCCTCGGGTATG
AGTTCACCTTGTTAGAAAGGGTACCGGGGGTGTCTGTTGCAGAGGTATAT
GATACTCTTGATGAGGGAAGGAAAATGAAGCTTGTGGAGCAGTTGGCGGG
GTATGTGGTTGAGTTGCATAATCGTCCGTGGGAGGGGGGGTATGTGGGGG
GATTGAGATTATCACATGGTGGTGATAGGGAGGGGAAGAAGGAGGTGGAG
GAGGAGATAGTGCGTGGTCCGCCTATTGAAGAGACGTACTGGCAGGTGCC
GGATTTGGAAACATACTGGTCTGGGACGGACGAGACATTGGAAACATTGA
ATCCGTTCCAGAGTGATGGGTATGCAAGCTACACGGGGTATAATATTGCT
TGTGTGGAGCGATATATCCATGCTATTAGCATCCATCCATCGCTGTCTGC
GCATAGGGATCTCATTCCTCGGTTGGAGCAGTTCATCTCAGTCCTGGAAT
CAGATGATAACTTGAACAATGTACCATATGTATTGGCACATAAGGACCTC
CACTTCGCGAACATCATGTGCGATCCATCGTCTCCCGAGTGTCCCATCAC
TGCCGTGCTGGACTGGGAGTTTGCGAGTGTGGTGCCGGCGCCGCGGTGGA
ATCCGGTGCGGGCGTTCCTGTGGAATTACCGGTATGGGGCGGAGGATAAG
GCGGAGAGGGATCGGTTGGAGAGGGTGTTTGAGGAGGTTTGTAAGAGAAG
AGGGGAGGGGAGGGTGTTGGAGGGGATGAGGTTAAGTGAGAGGCAGGAGA
GGATGCAGAAGGTGGTGAATCATGTTAGGGCTATTGTGGAGGTGGGGATA
CGGAATCCAGGGGAGGAAGGAGAAAGGAAAGTGAGGGGGTGGAGGGGGAT
GGTGGAGGAGACGTTGAAGGTATTCAATGTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009212-T1.utr5p1 | KJC3_009212-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR002575 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4880952..4882608 - |
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