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KJC3_009235-T1, KJC3_009235-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009235-T1
Unique NameKJC3_009235-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4941244..4942874-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009235-T1 ID=KJC3_009235-T1|Name=KJC3_009235-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1631bp|location=Sequence derived from alignment at ch6:4941244..4942874- (Aspergillus niger KJC3)
CAGATATCAACTTATAAGCAAGTGATTGCCCAGTGCCACCATGCCTGCTG
CAGCATTTCATCAGAGCCCCTCACAACCCCCTCACTCTCCCAACACATTA
TCATAACCAGCTCAACATGACCCAAACTGACATCCCAGCCACCGATCCAG
CTGTCTACGAAGCCTACAAATCCCAATGGGCCTCATTACCCGACACCGCT
GATGCCTGGCTAGCTCGGGCGCGTGAAGTAGCCACAGTCCTGAGCCAGGA
TGCTGCGCAGCGCGAGCAAGAGAACAAATCCCCACGGGCGGAAGTAGCTC
TACTCAAACACTCTGGCCTTCTTAAACTACTAGGCCCCAAGAAATACGGC
GGAGGCGAACAGCCCTGGAGCGTGGGATACAAGGCAATCCGCGAGGTAGC
CAAAGGAGATGGGTATATACATCCCCCTCCCCTTTCTTCCATAACCACAA
TATACCACAACAAAACTAACCAAGGTAAACAGTTCAATCGGTATGCTCCT
AGGCTACCACCTCCTCTGGTCCACAACAGCCAACGTAGTCGGCACCCCCT
CGCAAGCCGACCGCATCCACCAGTGGATAATCACAAACAACTACTTCGTC
GGCGGGGCCGTCAACCCCCGCGACAGCGATCTATCCATCACTTCCGACGG
AGAGGACATCATCTTCAACGGGGCCAAATTCTTCAACACGGGGGGCGTCG
TCTCCGACCTTACTGTCCTCGAAGGTGTCCTCGAAGGTACAGGCGAGCAC
ATCTTCGCGCTCGTCGAGACCCGTCAGGCGGGGATCAAGTTCGCCCATAA
CTGGAATAACATTGGTCTACGATTGACGGAGTCCGGAGGGGTCAAGATAG
AGAATGTGCGTGCGCCGTGGAAAGATGCATTGGGATGGGACGATGTGTCG
AAGAGGCCGCGCGAGGAGGTTCTGGGTGTGCCGTTTGCGAGTTTGTTGCT
TCCCACGTACGTTATACCTTCCATCCTTCCATTTGATCCATTAATGAACA
CAGCAATACTGACATATTCATTGGATAGGATCCAACTCGTTTTCAGCAAC
TTCTACCTCGGCATCGCTCAAGGCGCACTAGCCTTCGCATCACAATACAC
CGTCAGCACGACCCGCCCATGGCCCTTCGGCGGGGACAACAAGCCCTCCG
CGACAGAAGAGTTCTACATTCTCGAGCGATACGGGAACTTCTTCGCGCAT
CTCCGCGCGGCCGAGGCGCTGGCCGATCGGGCTGGAGAGGAGATTTCGTC
CTTGTACCGAGAGCATGCGGATAATCGGCCTGGGTTGACGGCTAGACAAC
GGGGTGAGTTGGCCGAGTGGATTGCCAGTGTCAAGGTGGTTACCACGGAT
GTTGGGTTGAGGGTGACCTCGGGTATTTTTGAGGTTACTGGTGCCAGAGC
GACAGCGGTGAAGGTCGGATTGGATCGGTTTTGGCGCGATATTCGGACGC
ATACGCTGCATGATCCGGTGGCGTATAAGAATCGCGAGCTGGGGAGATAT
GCTCTGTTGGGTGAGGTGCCGGAGCCGACGTGGTATACTTAGGTGGCAAT
GGACGGTAGCGATTAAATTAATGTGTTATGTTTGAAATGGACTTAGTGCA
CGTATGGCAGTACATTTCACGGTGAAAGCGT
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Coding sequence (CDS) from alignment at ch6:4941244..4942874-

>KJC3_009235-T1 ID=KJC3_009235-T1|Name=KJC3_009235-T1|organism=Aspergillus niger KJC3|type=CDS|length=3852bp|location=Sequence derived from alignment at ch6:4941244..4942874- (Aspergillus niger KJC3)
GATCCAACTCGTTTTCAGCAACTTCTACCTCGGCATCGCTCAAGGCGCAC
TAGCCTTCGCATCACAATACACCGTCAGCACGACCCGCCCATGGCCCTTC
GGCGGGGACAACAAGCCCTCCGCGACAGAAGAGTTCTACATTCTCGAGCG
ATACGGGAACTTCTTCGCGCATCTCCGCGCGGCCGAGGCGCTGGCCGATC
GGGCTGGAGAGGAGATTTCGTCCTTGTACCGAGAGCATGCGGATAATCGG
CCTGGGTTGACGGCTAGACAACGGGGTGAGTTGGCCGAGTGGATTGCCAG
TGTCAAGGTGGTTACCACGGATGTTGGGTTGAGGGTGACCTCGGGTATTT
TTGAGGTTACTGGTGCCAGAGCGACAGCGGTGAAGGTCGGATTGGATCGG
TTTTGGCGCGATATTCGGACGCATACGCTGCATGATCCGGTGGCGTATAA
GAATCGCGAGCTGGGGAGATATGCTCTGTTGGGTGAGGTGCCGGAGCCGA
CGTGGTATACTTAGTTCAATCGGTATGCTCCTAGGCTACCACCTCCTCTG
GTCCACAACAGCCAACGTAGTCGGCACCCCCTCGCAAGCCGACCGCATCC
ACCAGTGGATAATCACAAACAACTACTTCGTCGGCGGGGCCGTCAACCCC
CGCGACAGCGATCTATCCATCACTTCCGACGGAGAGGACATCATCTTCAA
CGGGGCCAAATTCTTCAACACGGGGGGCGTCGTCTCCGACCTTACTGTCC
TCGAAGGTGTCCTCGAAGGTACAGGCGAGCACATCTTCGCGCTCGTCGAG
ACCCGTCAGGCGGGGATCAAGTTCGCCCATAACTGGAATAACATTGGTCT
ACGATTGACGGAGTCCGGAGGGGTCAAGATAGAGAATGTGCGTGCGCCGT
GGAAAGATGCATTGGGATGGGACGATGTGTCGAAGAGGCCGCGCGAGGAG
GTTCTGGGTGTGCCGTTTGCGAGTTTGTTGCTTCCCACATGACCCAAACT
GACATCCCAGCCACCGATCCAGCTGTCTACGAAGCCTACAAATCCCAATG
GGCCTCATTACCCGACACCGCTGATGCCTGGCTAGCTCGGGCGCGTGAAG
TAGCCACAGTCCTGAGCCAGGATGCTGCGCAGCGCGAGCAAGAGAACAAA
TCCCCACGGGCGGAAGTAGCTCTACTCAAACACTCTGGCCTTCTTAAACT
ACTAGGCCCCAAGAAATACGGCGGAGGCGAACAGCCCTGGAGCGTGGGAT
ACAAGGCAATCCGCGAGGTAGCCAAAGGAGATGGGATCCAACTCGTTTTC
AGCAACTTCTACCTCGGCATCGCTCAAGGCGCACTAGCCTTCGCATCACA
ATACACCGTCAGCACGACCCGCCCATGGCCCTTCGGCGGGGACAACAAGC
CCTCCGCGACAGAAGAGTTCTACATTCTCGAGCGATACGGGAACTTCTTC
GCGCATCTCCGCGCGGCCGAGGCGCTGGCCGATCGGGCTGGAGAGGAGAT
TTCGTCCTTGTACCGAGAGCATGCGGATAATCGGCCTGGGTTGACGGCTA
GACAACGGGGTGAGTTGGCCGAGTGGATTGCCAGTGTCAAGGTGGTTACC
ACGGATGTTGGGTTGAGGGTGACCTCGGGTATTTTTGAGGTTACTGGTGC
CAGAGCGACAGCGGTGAAGGTCGGATTGGATCGGTTTTGGCGCGATATTC
GGACGCATACGCTGCATGATCCGGTGGCGTATAAGAATCGCGAGCTGGGG
AGATATGCTCTGTTGGGTGAGGTGCCGGAGCCGACGTGGTATACTTAGTT
CAATCGGTATGCTCCTAGGCTACCACCTCCTCTGGTCCACAACAGCCAAC
GTAGTCGGCACCCCCTCGCAAGCCGACCGCATCCACCAGTGGATAATCAC
AAACAACTACTTCGTCGGCGGGGCCGTCAACCCCCGCGACAGCGATCTAT
CCATCACTTCCGACGGAGAGGACATCATCTTCAACGGGGCCAAATTCTTC
AACACGGGGGGCGTCGTCTCCGACCTTACTGTCCTCGAAGGTGTCCTCGA
AGGTACAGGCGAGCACATCTTCGCGCTCGTCGAGACCCGTCAGGCGGGGA
TCAAGTTCGCCCATAACTGGAATAACATTGGTCTACGATTGACGGAGTCC
GGAGGGGTCAAGATAGAGAATGTGCGTGCGCCGTGGAAAGATGCATTGGG
ATGGGACGATGTGTCGAAGAGGCCGCGCGAGGAGGTTCTGGGTGTGCCGT
TTGCGAGTTTGTTGCTTCCCACATGACCCAAACTGACATCCCAGCCACCG
ATCCAGCTGTCTACGAAGCCTACAAATCCCAATGGGCCTCATTACCCGAC
ACCGCTGATGCCTGGCTAGCTCGGGCGCGTGAAGTAGCCACAGTCCTGAG
CCAGGATGCTGCGCAGCGCGAGCAAGAGAACAAATCCCCACGGGCGGAAG
TAGCTCTACTCAAACACTCTGGCCTTCTTAAACTACTAGGCCCCAAGAAA
TACGGCGGAGGCGAACAGCCCTGGAGCGTGGGATACAAGGCAATCCGCGA
GGTAGCCAAAGGAGATGGGATCCAACTCGTTTTCAGCAACTTCTACCTCG
GCATCGCTCAAGGCGCACTAGCCTTCGCATCACAATACACCGTCAGCACG
ACCCGCCCATGGCCCTTCGGCGGGGACAACAAGCCCTCCGCGACAGAAGA
GTTCTACATTCTCGAGCGATACGGGAACTTCTTCGCGCATCTCCGCGCGG
CCGAGGCGCTGGCCGATCGGGCTGGAGAGGAGATTTCGTCCTTGTACCGA
GAGCATGCGGATAATCGGCCTGGGTTGACGGCTAGACAACGGGGTGAGTT
GGCCGAGTGGATTGCCAGTGTCAAGGTGGTTACCACGGATGTTGGGTTGA
GGGTGACCTCGGGTATTTTTGAGGTTACTGGTGCCAGAGCGACAGCGGTG
AAGGTCGGATTGGATCGGTTTTGGCGCGATATTCGGACGCATACGCTGCA
TGATCCGGTGGCGTATAAGAATCGCGAGCTGGGGAGATATGCTCTGTTGG
GTGAGGTGCCGGAGCCGACGTGGTATACTTAGTTCAATCGGTATGCTCCT
AGGCTACCACCTCCTCTGGTCCACAACAGCCAACGTAGTCGGCACCCCCT
CGCAAGCCGACCGCATCCACCAGTGGATAATCACAAACAACTACTTCGTC
GGCGGGGCCGTCAACCCCCGCGACAGCGATCTATCCATCACTTCCGACGG
AGAGGACATCATCTTCAACGGGGCCAAATTCTTCAACACGGGGGGCGTCG
TCTCCGACCTTACTGTCCTCGAAGGTGTCCTCGAAGGTACAGGCGAGCAC
ATCTTCGCGCTCGTCGAGACCCGTCAGGCGGGGATCAAGTTCGCCCATAA
CTGGAATAACATTGGTCTACGATTGACGGAGTCCGGAGGGGTCAAGATAG
AGAATGTGCGTGCGCCGTGGAAAGATGCATTGGGATGGGACGATGTGTCG
AAGAGGCCGCGCGAGGAGGTTCTGGGTGTGCCGTTTGCGAGTTTGTTGCT
TCCCACATGACCCAAACTGACATCCCAGCCACCGATCCAGCTGTCTACGA
AGCCTACAAATCCCAATGGGCCTCATTACCCGACACCGCTGATGCCTGGC
TAGCTCGGGCGCGTGAAGTAGCCACAGTCCTGAGCCAGGATGCTGCGCAG
CGCGAGCAAGAGAACAAATCCCCACGGGCGGAAGTAGCTCTACTCAAACA
CTCTGGCCTTCTTAAACTACTAGGCCCCAAGAAATACGGCGGAGGCGAAC
AGCCCTGGAGCGTGGGATACAAGGCAATCCGCGAGGTAGCCAAAGGAGAT
GG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009235KJC3_009235Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009235-T1KJC3_009235-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009235-T1.cdsKJC3_009235-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009235-T1.utr3p1KJC3_009235-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009235-T1.exon3KJC3_009235-T1.exon3Aspergillus niger KJC3exon
KJC3_009235-T1.exon2KJC3_009235-T1.exon2Aspergillus niger KJC3exon
KJC3_009235-T1.exon1KJC3_009235-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009235-T1.utr5p1KJC3_009235-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036250
DBxrefInterPro:IPR009100
DBxrefInterPro:IPR013107
DBxrefInterPro:IPR013786
DBxrefInterPro:IPR037069
DBxrefPFAM:PF02771
DBxrefPFAM:PF08028
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4941244..4942874 -
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