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KJC3_009236-T1, KJC3_009236-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009236-T1
Unique NameKJC3_009236-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4943102..4944273-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009236-T1 ID=KJC3_009236-T1|Name=KJC3_009236-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1172bp|location=Sequence derived from alignment at ch6:4943102..4944273- (Aspergillus niger KJC3)
CCCATTTTCCAGCAGATCCCGCCCATATCCCGTAGAGATCCCGCCCACTC
TGGAGTCAATTTCTGCTCACCACTGGGTATCCAGATGGCGTAATAGCCCC
AAAATAAGGCCCACGCGTCTATAAGATAGCATTATTAGGGAATGGCCCAT
TCACCGCGAGGTCATCAATCAGCACAACTAGGCAGTCCTACCTACACCGT
CCCCTCACAGTTACAATGTCTACCACTTCACCAACAGACAGAAAGAATGT
CACTGATGCATTCGACATTGAGCGACAAGCATCTGTTACTGCAGCAGCAG
TGCAAGTCGCACCCAAGTCACTCGGTGCAGGCGTGAGTCACCATCCTCCA
TCCTGAAAAATCAGTGATACACTAACGCATCTCATGTGTAGTCAGCACTA
GCTCTAGGCGCATTCGGCACGACTTTAACAACCCTATCCCTCAGTCTGAT
GGAATGGCGCGGCGTAACCATCACCAACGTCTACGTGGGCAACTTCTTCT
TCATCGCAGCATTCGGACTTGTCATCACCGCGCAGTGGGAACTCTCCGTG
GGGAATGGTTTCGCGTACACGGTATTCAGCGCATTCGGTACATCTCCCTC
ATAGTCCCTATTACTTTCCTTCAGAATAACGAAGCTAATCAGACTGATAT
TCCGAACAGGCCTCTTCTACGCCGGCTACGGCGCGATCCTCACCCCAGCC
TTTGGCGTAGCACAAGCCTACGGATCCGACACAGCACAGTACAACAACGC
GCTCGGGTTCTTCATGATATTATGGACAGTATTCGTGTTCGCGTTTCTCA
TAGCATCGCTACCGATTAATCTGGCAAATATTTTGGTTTTCTTCTTTGTG
GACTTGGGGTTCTTGACTGTGGCGGCGAGTTACTTTGCTGATGCGGATGG
ACACGCTGAGTCGGCGAGGGCATTGCGCAAGACAGGAGGGGCAAGTTGCT
TTGTGGCGGGGATGGTGGGGTGGTATATTGTGTTTCATTTGTTCCTGAAA
GATAATAGTTTGCTGGAGTTGCCGTTGGGGGACACGGGGAGGTATTTTGC
GAAGAGCAGGAAGCGAGAAGAGTAGAAAGGACAGAGGGTGTGGGTATGCC
CTGCAGATCAGAACAGCAGTTAGTACTAATTAGTGGTAGTATATCTGGAT
ATAATGTATTGAGTTAATTGTT
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Coding sequence (CDS) from alignment at ch6:4943102..4944273-

>KJC3_009236-T1 ID=KJC3_009236-T1|Name=KJC3_009236-T1|organism=Aspergillus niger KJC3|type=CDS|length=2187bp|location=Sequence derived from alignment at ch6:4943102..4944273- (Aspergillus niger KJC3)
GCCTCTTCTACGCCGGCTACGGCGCGATCCTCACCCCAGCCTTTGGCGTA
GCACAAGCCTACGGATCCGACACAGCACAGTACAACAACGCGCTCGGGTT
CTTCATGATATTATGGACAGTATTCGTGTTCGCGTTTCTCATAGCATCGC
TACCGATTAATCTGGCAAATATTTTGGTTTTCTTCTTTGTGGACTTGGGG
TTCTTGACTGTGGCGGCGAGTTACTTTGCTGATGCGGATGGACACGCTGA
GTCGGCGAGGGCATTGCGCAAGACAGGAGGGGCAAGTTGCTTTGTGGCGG
GGATGGTGGGGTGGTATATTGTGTTTCATTTGTTCCTGAAAGATAATAGT
TTGCTGGAGTTGCCGTTGGGGGACACGGGGAGGTATTTTGCGAAGAGCAG
GAAGCGAGAAGAGTAGTCAGCACTAGCTCTAGGCGCATTCGGCACGACTT
TAACAACCCTATCCCTCAGTCTGATGGAATGGCGCGGCGTAACCATCACC
AACGTCTACGTGGGCAACTTCTTCTTCATCGCAGCATTCGGACTTGTCAT
CACCGCGCAGTGGGAACTCTCCGTGGGGAATGGTTTCGCGTACACGGTAT
TCAGCGCATTCGATGTCTACCACTTCACCAACAGACAGAAAGAATGTCAC
TGATGCATTCGACATTGAGCGACAAGCATCTGTTACTGCAGCAGCAGTGC
AAGTCGCACCCAAGTCACTCGGTGCAGGCGCCTCTTCTACGCCGGCTACG
GCGCGATCCTCACCCCAGCCTTTGGCGTAGCACAAGCCTACGGATCCGAC
ACAGCACAGTACAACAACGCGCTCGGGTTCTTCATGATATTATGGACAGT
ATTCGTGTTCGCGTTTCTCATAGCATCGCTACCGATTAATCTGGCAAATA
TTTTGGTTTTCTTCTTTGTGGACTTGGGGTTCTTGACTGTGGCGGCGAGT
TACTTTGCTGATGCGGATGGACACGCTGAGTCGGCGAGGGCATTGCGCAA
GACAGGAGGGGCAAGTTGCTTTGTGGCGGGGATGGTGGGGTGGTATATTG
TGTTTCATTTGTTCCTGAAAGATAATAGTTTGCTGGAGTTGCCGTTGGGG
GACACGGGGAGGTATTTTGCGAAGAGCAGGAAGCGAGAAGAGTAGTCAGC
ACTAGCTCTAGGCGCATTCGGCACGACTTTAACAACCCTATCCCTCAGTC
TGATGGAATGGCGCGGCGTAACCATCACCAACGTCTACGTGGGCAACTTC
TTCTTCATCGCAGCATTCGGACTTGTCATCACCGCGCAGTGGGAACTCTC
CGTGGGGAATGGTTTCGCGTACACGGTATTCAGCGCATTCGATGTCTACC
ACTTCACCAACAGACAGAAAGAATGTCACTGATGCATTCGACATTGAGCG
ACAAGCATCTGTTACTGCAGCAGCAGTGCAAGTCGCACCCAAGTCACTCG
GTGCAGGCGCCTCTTCTACGCCGGCTACGGCGCGATCCTCACCCCAGCCT
TTGGCGTAGCACAAGCCTACGGATCCGACACAGCACAGTACAACAACGCG
CTCGGGTTCTTCATGATATTATGGACAGTATTCGTGTTCGCGTTTCTCAT
AGCATCGCTACCGATTAATCTGGCAAATATTTTGGTTTTCTTCTTTGTGG
ACTTGGGGTTCTTGACTGTGGCGGCGAGTTACTTTGCTGATGCGGATGGA
CACGCTGAGTCGGCGAGGGCATTGCGCAAGACAGGAGGGGCAAGTTGCTT
TGTGGCGGGGATGGTGGGGTGGTATATTGTGTTTCATTTGTTCCTGAAAG
ATAATAGTTTGCTGGAGTTGCCGTTGGGGGACACGGGGAGGTATTTTGCG
AAGAGCAGGAAGCGAGAAGAGTAGTCAGCACTAGCTCTAGGCGCATTCGG
CACGACTTTAACAACCCTATCCCTCAGTCTGATGGAATGGCGCGGCGTAA
CCATCACCAACGTCTACGTGGGCAACTTCTTCTTCATCGCAGCATTCGGA
CTTGTCATCACCGCGCAGTGGGAACTCTCCGTGGGGAATGGTTTCGCGTA
CACGGTATTCAGCGCATTCGATGTCTACCACTTCACCAACAGACAGAAAG
AATGTCACTGATGCATTCGACATTGAGCGACAAGCATCTGTTACTGCAGC
AGCAGTGCAAGTCGCACCCAAGTCACTCGGTGCAGGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009236KJC3_009236Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009236-T1KJC3_009236-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009236-T1.cdsKJC3_009236-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009236-T1.utr3p1KJC3_009236-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009236-T1.exon3KJC3_009236-T1.exon3Aspergillus niger KJC3exon
KJC3_009236-T1.exon2KJC3_009236-T1.exon2Aspergillus niger KJC3exon
KJC3_009236-T1.exon1KJC3_009236-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009236-T1.utr5p1KJC3_009236-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000791
DBxrefPFAM:PF01184
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4943102..4944273 -
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