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KJC3_009237-T1, KJC3_009237-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009237-T1
Unique NameKJC3_009237-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4944446..4945535-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009237-T1 ID=KJC3_009237-T1|Name=KJC3_009237-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1090bp|location=Sequence derived from alignment at ch6:4944446..4945535- (Aspergillus niger KJC3)
ATGCATACTTCATATCTTCTGGGCGCCCTTGCCGCCCTGGCTGCTACCGC
CGTCGGTGCTCCGGCAGAGCACATCAAGAAGCGAGAGAGCCGGACGAGTG
CTCCCTCAGGGTGTCTGACGGTCGGATCGGATGGAACTTATTCCACCATC
GGCGACGCGCTTGACGCTCTAGGCTCATCCACTTCGTCCGCTTGCATTTA
CGTTGCCAGCGGCACGTATGAAGAGCAGTTGACCATTGACTACGCTGGCA
ACCTGACCCTGTACGGTGAGACTACCGACACCAGCACATACAAGGACAAT
GTGGTTACCATTACCCACACCATTTCGTCGCCGGATGCCGGCTCTCTCGA
CAAGAGCGCTACCGTCAACGTGGTCTCGGATGGGTTCAGCATGTACAACA
TCAACGTGGAGAATGGATATGGCGAGGGAGCACAGGCCGTAGCGTAAGCA
TGCCGATCTTCCCAATTCATTGAGATTGTTGGGCTAATGGCTTTGCTAGC
CTTGTCGGAAACGCAGATCAACTGGGCTTCTATGGATGCCAATTCAGTGG
TTATCAAGACACTCTCTATGTCAAGGCCGGCACCCAGTATTACTCCAACT
GCATGATTGAGGGTCAGTATTTGTCCAAACAGCACAATTAGAACATTGAC
TAACTATTCCAGGCGCGGTCGACTACATCTTTGGCGATGCGTCCGTGTGG
TTCGGCGAATGTGACATTGTGTCTAACGGCGCCGGTGCCATCACGGCCTC
ATCGCGCGAAACTTCCTCTGACTCAGGCTGGTACGCTATCGACAACTGCA
ACATCAAGGCTGCTTCAGGAGTCTCTCTCACGGAGGAGGTCTACCTGGGC
CGGCCGTGGCGCGTGCTGGCGCGGGTCATCTACCAGAACTCGGTGTTGTC
GGACATCATCAACCCCAAGGGATGGACGACCATGGCAGACGGTGCGACGC
CGCTGTATTATGAATACAACAACTCTGGTGCGGGATCGGACACCTCTGAT
CGCGAATACGAGACCTCAATTTCTGCTGCGGTTGACAAGACCACGGTGCT
GGGCGAGACTTGGGGAGACTGGATTGATCGGAGCTACTAA
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Coding sequence (CDS) from alignment at ch6:4944446..4945535-

>KJC3_009237-T1 ID=KJC3_009237-T1|Name=KJC3_009237-T1|organism=Aspergillus niger KJC3|type=CDS|length=2952bp|location=Sequence derived from alignment at ch6:4944446..4945535- (Aspergillus niger KJC3)
GCGCGGTCGACTACATCTTTGGCGATGCGTCCGTGTGGTTCGGCGAATGT
GACATTGTGTCTAACGGCGCCGGTGCCATCACGGCCTCATCGCGCGAAAC
TTCCTCTGACTCAGGCTGGTACGCTATCGACAACTGCAACATCAAGGCTG
CTTCAGGAGTCTCTCTCACGGAGGAGGTCTACCTGGGCCGGCCGTGGCGC
GTGCTGGCGCGGGTCATCTACCAGAACTCGGTGTTGTCGGACATCATCAA
CCCCAAGGGATGGACGACCATGGCAGACGGTGCGACGCCGCTGTATTATG
AATACAACAACTCTGGTGCGGGATCGGACACCTCTGATCGCGAATACGAG
ACCTCAATTTCTGCTGCGGTTGACAAGACCACGGTGCTGGGCGAGACTTG
GGGAGACTGGATTGATCGGAGCTACTAACCTTGTCGGAAACGCAGATCAA
CTGGGCTTCTATGGATGCCAATTCAGTGGTTATCAAGACACTCTCTATGT
CAAGGCCGGCACCCAGTATTACTCCAACTGCATGATTGAGGATGCATACT
TCATATCTTCTGGGCGCCCTTGCCGCCCTGGCTGCTACCGCCGTCGGTGC
TCCGGCAGAGCACATCAAGAAGCGAGAGAGCCGGACGAGTGCTCCCTCAG
GGTGTCTGACGGTCGGATCGGATGGAACTTATTCCACCATCGGCGACGCG
CTTGACGCTCTAGGCTCATCCACTTCGTCCGCTTGCATTTACGTTGCCAG
CGGCACGTATGAAGAGCAGTTGACCATTGACTACGCTGGCAACCTGACCC
TGTACGGTGAGACTACCGACACCAGCACATACAAGGACAATGTGGTTACC
ATTACCCACACCATTTCGTCGCCGGATGCCGGCTCTCTCGACAAGAGCGC
TACCGTCAACGTGGTCTCGGATGGGTTCAGCATGTACAACATCAACGTGG
AGAATGGATATGGCGAGGGAGCACAGGCCGTAGCGCGCGGTCGACTACAT
CTTTGGCGATGCGTCCGTGTGGTTCGGCGAATGTGACATTGTGTCTAACG
GCGCCGGTGCCATCACGGCCTCATCGCGCGAAACTTCCTCTGACTCAGGC
TGGTACGCTATCGACAACTGCAACATCAAGGCTGCTTCAGGAGTCTCTCT
CACGGAGGAGGTCTACCTGGGCCGGCCGTGGCGCGTGCTGGCGCGGGTCA
TCTACCAGAACTCGGTGTTGTCGGACATCATCAACCCCAAGGGATGGACG
ACCATGGCAGACGGTGCGACGCCGCTGTATTATGAATACAACAACTCTGG
TGCGGGATCGGACACCTCTGATCGCGAATACGAGACCTCAATTTCTGCTG
CGGTTGACAAGACCACGGTGCTGGGCGAGACTTGGGGAGACTGGATTGAT
CGGAGCTACTAACCTTGTCGGAAACGCAGATCAACTGGGCTTCTATGGAT
GCCAATTCAGTGGTTATCAAGACACTCTCTATGTCAAGGCCGGCACCCAG
TATTACTCCAACTGCATGATTGAGGATGCATACTTCATATCTTCTGGGCG
CCCTTGCCGCCCTGGCTGCTACCGCCGTCGGTGCTCCGGCAGAGCACATC
AAGAAGCGAGAGAGCCGGACGAGTGCTCCCTCAGGGTGTCTGACGGTCGG
ATCGGATGGAACTTATTCCACCATCGGCGACGCGCTTGACGCTCTAGGCT
CATCCACTTCGTCCGCTTGCATTTACGTTGCCAGCGGCACGTATGAAGAG
CAGTTGACCATTGACTACGCTGGCAACCTGACCCTGTACGGTGAGACTAC
CGACACCAGCACATACAAGGACAATGTGGTTACCATTACCCACACCATTT
CGTCGCCGGATGCCGGCTCTCTCGACAAGAGCGCTACCGTCAACGTGGTC
TCGGATGGGTTCAGCATGTACAACATCAACGTGGAGAATGGATATGGCGA
GGGAGCACAGGCCGTAGCGCGCGGTCGACTACATCTTTGGCGATGCGTCC
GTGTGGTTCGGCGAATGTGACATTGTGTCTAACGGCGCCGGTGCCATCAC
GGCCTCATCGCGCGAAACTTCCTCTGACTCAGGCTGGTACGCTATCGACA
ACTGCAACATCAAGGCTGCTTCAGGAGTCTCTCTCACGGAGGAGGTCTAC
CTGGGCCGGCCGTGGCGCGTGCTGGCGCGGGTCATCTACCAGAACTCGGT
GTTGTCGGACATCATCAACCCCAAGGGATGGACGACCATGGCAGACGGTG
CGACGCCGCTGTATTATGAATACAACAACTCTGGTGCGGGATCGGACACC
TCTGATCGCGAATACGAGACCTCAATTTCTGCTGCGGTTGACAAGACCAC
GGTGCTGGGCGAGACTTGGGGAGACTGGATTGATCGGAGCTACTAACCTT
GTCGGAAACGCAGATCAACTGGGCTTCTATGGATGCCAATTCAGTGGTTA
TCAAGACACTCTCTATGTCAAGGCCGGCACCCAGTATTACTCCAACTGCA
TGATTGAGGATGCATACTTCATATCTTCTGGGCGCCCTTGCCGCCCTGGC
TGCTACCGCCGTCGGTGCTCCGGCAGAGCACATCAAGAAGCGAGAGAGCC
GGACGAGTGCTCCCTCAGGGTGTCTGACGGTCGGATCGGATGGAACTTAT
TCCACCATCGGCGACGCGCTTGACGCTCTAGGCTCATCCACTTCGTCCGC
TTGCATTTACGTTGCCAGCGGCACGTATGAAGAGCAGTTGACCATTGACT
ACGCTGGCAACCTGACCCTGTACGGTGAGACTACCGACACCAGCACATAC
AAGGACAATGTGGTTACCATTACCCACACCATTTCGTCGCCGGATGCCGG
CTCTCTCGACAAGAGCGCTACCGTCAACGTGGTCTCGGATGGGTTCAGCA
TGTACAACATCAACGTGGAGAATGGATATGGCGAGGGAGCACAGGCCGTA
GC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009237KJC3_009237Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009237-T1KJC3_009237-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009237-T1.cdsKJC3_009237-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009237-T1.exon3KJC3_009237-T1.exon3Aspergillus niger KJC3exon
KJC3_009237-T1.exon2KJC3_009237-T1.exon2Aspergillus niger KJC3exon
KJC3_009237-T1.exon1KJC3_009237-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
NoteCAZy:CE8
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR033131
DBxrefInterPro:IPR000070
DBxrefInterPro:IPR012334
DBxrefPFAM:PF01095
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4944446..4945535 -
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