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KJC3_009242-T1, KJC3_009242-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009242-T1
Unique NameKJC3_009242-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4955956..4957613-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009242-T1 ID=KJC3_009242-T1|Name=KJC3_009242-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1658bp|location=Sequence derived from alignment at ch6:4955956..4957613- (Aspergillus niger KJC3)
GGGCCTTTACCAACCCTTTTCACTCCCTAAGGCAATCAAATCAATTTATC
ATGTCTCAAGAAGTCAAGGACAAAGGTCCTCAGGAGGTTGTGCACACAAT
CGAGCTGGGCTCCCTCGGGGGCAATTCCAGCAGTGCCAGCCTCCAGCCAC
TCTCTCAAACGCCATCAGAGGCGCCGCCTCCGCCTCCGCCCCATACGGTG
TTGACGGAAAAGAAGAAGATCATGACCATTGCTATAGCGGCCATCGTGGG
ATTCTTAGCTCCGGTGTCAGCAAACATCTACTATCCCGCCATCGACCAAC
TATCCGACGATTTGCATGTCTCCGTCAGCAAAATCAACTTGACCATCACC
ACGTACATGGTAAGATCCTATCCCGGATCCGGGAAGCTGTGTAGCATAAG
CTAACATTGAGTATATCAGATCTTCCAAGGAGTTGCGCCGTTGGTGACGG
GTAGTATTTCCGATGTGTATGGCCGGCGACCCACGATGCTGGTCTGTCTG
ATCACGTACCTCGCCGTCAATATCGGCCTGGCGCTGCAAGACAACTACAT
TGCGCTCATTGTCCTCAGAACCTTCCAAAGTTGCGGAAGCAGTGCCATTT
CAGTCGTTGGCATGGCTGTCACGGCCGACGTGGTGACTAGAAGCGAGCGT
GGCAAATACATGATCTACTCGTCCCTGGGGATAACAATGGGACCTGCACT
GGGACCTATTATTGGAGGTGTCCTGGCCCAGTTTCTCGACTGGCGAAGTA
TCTTCTGGTTCCTGGCCATCTTTGCCGCAGCGATGATAGTCCTGATCCTT
GTCTGCTTCCCTGAAACCTGCCGCATGGTGGTAGGAAATGGATCCATTCC
CGCGCCGCGATGGAATAGGCCACTCATTCCGATCGTGGAGCCCTCAGCCT
ATGAGGGGGCTGAGGCGGCTAAGAAAGAGCTGGAAGACGGGCCTAAGCCC
CGTCGACCGACACCGATAGACAGCATCAAGATCGCCTTGGAAAAGGAAAC
TGGCGCCATCATCGCTTTCTGCGCCATTCTCTACTGTGGGTACTTTGCTG
TTCTCAGTAGTTTGTCTTCGGAGTTGGGAGATAAGTACGGCTACAACTCG
CTCCAGATTGGCCTGTGCTATATCCCTTACGGCATCGGCAGTCTCACCTC
ACGGTGGACCGTTGGACGATTTGTGGACTGGAATTTCCGTCGCGTAGGGC
GGCAGCATGGCTTGGAGGTGTCTAGCAACCGCCAGATGGACCTCGTTGAG
TTTCCTCTCGAAAAGGCCCGTCTCCAGATCACATTGCCGATGGTCTATAT
GTCCTGCATCTGCATCATTGGCTACGGCTGGGTCATGAATTACCGGACTC
ATGTGGCTGGACCGCTTGTTATGCTGTTTTTCACGGCGCATACCATCTCG
GGAGCCACCAGCATCCTGGTCACCCTGCTGATCGACTGCCACGTCAAGCG
GGCAGCGACAGTCACAGCTTCCAACACGATGTTCCGTTGCTTTCTGGGCG
CGGGGGTGGTTGCAGCTGCAGTGCCTATCATTGACGCAATCGGTATGGGC
TGGATGGGGACCCTGATTGCTGTCCTGTGGGCAGTTTCCAGCGTACTTCT
CTGGGGTGTTCTACTCTGGGGCCACGACTACCGCAAGAAGCTGGCGGGGA
GGATCTGA
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Coding sequence (CDS) from alignment at ch6:4955956..4957613-

>KJC3_009242-T1 ID=KJC3_009242-T1|Name=KJC3_009242-T1|organism=Aspergillus niger KJC3|type=CDS|length=3096bp|location=Sequence derived from alignment at ch6:4955956..4957613- (Aspergillus niger KJC3)
ATCTTCCAAGGAGTTGCGCCGTTGGTGACGGGTAGTATTTCCGATGTGTA
TGGCCGGCGACCCACGATGCTGGTCTGTCTGATCACGTACCTCGCCGTCA
ATATCGGCCTGGCGCTGCAAGACAACTACATTGCGCTCATTGTCCTCAGA
ACCTTCCAAAGTTGCGGAAGCAGTGCCATTTCAGTCGTTGGCATGGCTGT
CACGGCCGACGTGGTGACTAGAAGCGAGCGTGGCAAATACATGATCTACT
CGTCCCTGGGGATAACAATGGGACCTGCACTGGGACCTATTATTGGAGGT
GTCCTGGCCCAGTTTCTCGACTGGCGAAGTATCTTCTGGTTCCTGGCCAT
CTTTGCCGCAGCGATGATAGTCCTGATCCTTGTCTGCTTCCCTGAAACCT
GCCGCATGGTGGTAGGAAATGGATCCATTCCCGCGCCGCGATGGAATAGG
CCACTCATTCCGATCGTGGAGCCCTCAGCCTATGAGGGGGCTGAGGCGGC
TAAGAAAGAGCTGGAAGACGGGCCTAAGCCCCGTCGACCGACACCGATAG
ACAGCATCAAGATCGCCTTGGAAAAGGAAACTGGCGCCATCATCGCTTTC
TGCGCCATTCTCTACTGTGGGTACTTTGCTGTTCTCAGTAGTTTGTCTTC
GGAGTTGGGAGATAAGTACGGCTACAACTCGCTCCAGATTGGCCTGTGCT
ATATCCCTTACGGCATCGGCAGTCTCACCTCACGGTGGACCGTTGGACGA
TTTGTGGACTGGAATTTCCGTCGCGTAGGGCGGCAGCATGGCTTGGAGGT
GTCTAGCAACCGCCAGATGGACCTCGTTGAGTTTCCTCTCGAAAAGGCCC
GTCTCCAGATCACATTGCCGATGGTCTATATGTCCTGCATCTGCATCATT
GGCTACGGCTGGGTCATGAATTACCGGACTCATGTGGCTGGACCGCTTGT
TATGCTGTTTTTCACGGCGCATACCATCTCGGGAGCCACCAGCATCCTGG
TCACCCTGCTGATCGACTGCCACGTCAAGCGGGCAGCGACAGTCACAGCT
TCCAACACGATGTTCCGTTGCTTTCTGGGCGCGGGGGTGGTTGCAGCTGC
AGTGCCTATCATTGACGCAATCGGTATGGGCTGGATGGGGACCCTGATTG
CTGTCCTGTGGGCAGTTTCCAGCGTACTTCTCTGGGGTGTTCTACTCTGG
GGCCACGACTACCGCAAGAAGCTGGCGGGGAGGATCTGAATGTCTCAAGA
AGTCAAGGACAAAGGTCCTCAGGAGGTTGTGCACACAATCGAGCTGGGCT
CCCTCGGGGGCAATTCCAGCAGTGCCAGCCTCCAGCCACTCTCTCAAACG
CCATCAGAGGCGCCGCCTCCGCCTCCGCCCCATACGGTGTTGACGGAAAA
GAAGAAGATCATGACCATTGCTATAGCGGCCATCGTGGGATTCTTAGCTC
CGGTGTCAGCAAACATCTACTATCCCGCCATCGACCAACTATCCGACGAT
TTGCATGTCTCCGTCAGCAAAATCAACTTGACCATCACCACGTACATGAT
CTTCCAAGGAGTTGCGCCGTTGGTGACGGGTAGTATTTCCGATGTGTATG
GCCGGCGACCCACGATGCTGGTCTGTCTGATCACGTACCTCGCCGTCAAT
ATCGGCCTGGCGCTGCAAGACAACTACATTGCGCTCATTGTCCTCAGAAC
CTTCCAAAGTTGCGGAAGCAGTGCCATTTCAGTCGTTGGCATGGCTGTCA
CGGCCGACGTGGTGACTAGAAGCGAGCGTGGCAAATACATGATCTACTCG
TCCCTGGGGATAACAATGGGACCTGCACTGGGACCTATTATTGGAGGTGT
CCTGGCCCAGTTTCTCGACTGGCGAAGTATCTTCTGGTTCCTGGCCATCT
TTGCCGCAGCGATGATAGTCCTGATCCTTGTCTGCTTCCCTGAAACCTGC
CGCATGGTGGTAGGAAATGGATCCATTCCCGCGCCGCGATGGAATAGGCC
ACTCATTCCGATCGTGGAGCCCTCAGCCTATGAGGGGGCTGAGGCGGCTA
AGAAAGAGCTGGAAGACGGGCCTAAGCCCCGTCGACCGACACCGATAGAC
AGCATCAAGATCGCCTTGGAAAAGGAAACTGGCGCCATCATCGCTTTCTG
CGCCATTCTCTACTGTGGGTACTTTGCTGTTCTCAGTAGTTTGTCTTCGG
AGTTGGGAGATAAGTACGGCTACAACTCGCTCCAGATTGGCCTGTGCTAT
ATCCCTTACGGCATCGGCAGTCTCACCTCACGGTGGACCGTTGGACGATT
TGTGGACTGGAATTTCCGTCGCGTAGGGCGGCAGCATGGCTTGGAGGTGT
CTAGCAACCGCCAGATGGACCTCGTTGAGTTTCCTCTCGAAAAGGCCCGT
CTCCAGATCACATTGCCGATGGTCTATATGTCCTGCATCTGCATCATTGG
CTACGGCTGGGTCATGAATTACCGGACTCATGTGGCTGGACCGCTTGTTA
TGCTGTTTTTCACGGCGCATACCATCTCGGGAGCCACCAGCATCCTGGTC
ACCCTGCTGATCGACTGCCACGTCAAGCGGGCAGCGACAGTCACAGCTTC
CAACACGATGTTCCGTTGCTTTCTGGGCGCGGGGGTGGTTGCAGCTGCAG
TGCCTATCATTGACGCAATCGGTATGGGCTGGATGGGGACCCTGATTGCT
GTCCTGTGGGCAGTTTCCAGCGTACTTCTCTGGGGTGTTCTACTCTGGGG
CCACGACTACCGCAAGAAGCTGGCGGGGAGGATCTGAATGTCTCAAGAAG
TCAAGGACAAAGGTCCTCAGGAGGTTGTGCACACAATCGAGCTGGGCTCC
CTCGGGGGCAATTCCAGCAGTGCCAGCCTCCAGCCACTCTCTCAAACGCC
ATCAGAGGCGCCGCCTCCGCCTCCGCCCCATACGGTGTTGACGGAAAAGA
AGAAGATCATGACCATTGCTATAGCGGCCATCGTGGGATTCTTAGCTCCG
GTGTCAGCAAACATCTACTATCCCGCCATCGACCAACTATCCGACGATTT
GCATGTCTCCGTCAGCAAAATCAACTTGACCATCACCACGTACATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009242KJC3_009242Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009242-T1KJC3_009242-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009242-T1.cdsKJC3_009242-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009242-T1.exon2KJC3_009242-T1.exon2Aspergillus niger KJC3exon
KJC3_009242-T1.exon1KJC3_009242-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009242-T1.utr5p1KJC3_009242-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4955956..4957613 -
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