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KJC3_009256-T1, KJC3_009256-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009256-T1
Unique NameKJC3_009256-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4999854..5001372+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009256-T1 ID=KJC3_009256-T1|Name=KJC3_009256-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1519bp|location=Sequence derived from alignment at ch6:4999854..5001372+ (Aspergillus niger KJC3)
GCCTATTATAGTTCGGTGGTCTTGAAGGTGAAGCACAATGCCAGGGTTGG
TATTAGTGTTTCCTATGTTGCCTATGATTGTGCGGTTGTTGGGCCATATT
CCGTCGGCTGATCGGATAGACGCGATATATCCTTTTGGTCTAGCGGTTAA
GATGTCGACTGGCAGTTTCTGACTCCACCCAGGGTTCAGGATGCCGGCTA
CATCCACGGTGTAGAATACATCATATCTCAAACAACCCTTCGGAAACCGC
TTCGGAGACCGCTCCGGAGTTAGCGGACTTCACTTCCGTGCAGTGTCTGC
CCCACGACCATCCAACGCCGCATCGACGGCCCCGGGGATAGCCAGACAAC
AAACTCATTCTTCAGTTCGGTTATATATTGACTTCTGCACCCTTATCCCT
GCAGCCGACTTCATCAGAGTTCGTGAACCCCCTGCCTGACAGTGCATCAC
TCGAAATTGGTCTATTCATCATCGTCAATCAGAAAAATGGCTCGCATTCT
CATTACTGGCTCTGTCGATGGACTTGGCCTTGAGGCTGCCAGACAGCTTG
TCCACAGAGGCCACACTGTGTACCTGCATGCACGCAATCAACAACGTGCA
ATGGACGCGAAATCGGCATGTCCAGGTGCCGCCGGGGTGTTGACGGCCGA
CTTATCCAGTGTGGCAGAAACACAGAAGCTCTGCCACGATGTTAACGCAA
TTGGAAATTTTGATGCTGTCATCCTCAACGCTGGACTCATGCAGGGTGGC
TTTCGCAAAACCCCGGATACTGGTGCTCCAGCCTTGGTGTCTGTCAACCT
TATCTCACCTTATGTGATGTCTTGCTTGCTGCGTCCACCGAAGCGCCTCA
TTTTCATTTCCTCAAACCTGCACCGGCAGGCAAACATGGCGAGCATGGAT
GACATGTTCTGGTTCAAGCGCGGGGAGACCAGGTACCAGGACTACCCAGC
ATATTGTGACTCCAAGCTTCATGTCATGCTTCTCGCCAATGCAGTCGCTC
GGCGGTTCAAAAACACTTCAGTGACTTCAGTGCACCCCGGATGGGTGGCG
ACAAAGCTTGGCGGACAGGGTGCTCCAGATAAACTGGAGGACGGTGTCGA
AACGTATGTCATGTTGGCCGAAGGGGATTATGATGAACAGAACCTGTCTG
GAGCTTATTTTGAGCCCAAGAGGAAGATTGGCCAGCCGATTCCGGCTGCA
AGAGATGAGGATCTGCAAGAGAAGGTGGTGCAAGCCTGCGAAGAGGTTAC
TGGATTGAGACTGTCGGCTTAGTATTCAAATGTGGTTATAGAGGAGTTGA
TCATTGGACTGCATATATTGTTTGACCGCCATTGTGAAGCGTACACAATA
GTTAAGGAGGAAATATTGTTTGCTCACCACTTAGATCTCTGTTACATTAG
ATTTCTAGAATAATGAAATTGGCGATTGATAGATGTGCTTTCCCACATAC
CTATATGTGTGAAATTGGTAGTATCGGGAGAGACATTTCGAACATGCCCA
AGTGATAGCCAAGGCTGCT
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Coding sequence (CDS) from alignment at ch6:4999854..5001372+

>KJC3_009256-T1 ID=KJC3_009256-T1|Name=KJC3_009256-T1|organism=Aspergillus niger KJC3|type=CDS|length=786bp|location=Sequence derived from alignment at ch6:4999854..5001372+ (Aspergillus niger KJC3)
ATGGCTCGCATTCTCATTACTGGCTCTGTCGATGGACTTGGCCTTGAGGC
TGCCAGACAGCTTGTCCACAGAGGCCACACTGTGTACCTGCATGCACGCA
ATCAACAACGTGCAATGGACGCGAAATCGGCATGTCCAGGTGCCGCCGGG
GTGTTGACGGCCGACTTATCCAGTGTGGCAGAAACACAGAAGCTCTGCCA
CGATGTTAACGCAATTGGAAATTTTGATGCTGTCATCCTCAACGCTGGAC
TCATGCAGGGTGGCTTTCGCAAAACCCCGGATACTGGTGCTCCAGCCTTG
GTGTCTGTCAACCTTATCTCACCTTATGTGATGTCTTGCTTGCTGCGTCC
ACCGAAGCGCCTCATTTTCATTTCCTCAAACCTGCACCGGCAGGCAAACA
TGGCGAGCATGGATGACATGTTCTGGTTCAAGCGCGGGGAGACCAGGTAC
CAGGACTACCCAGCATATTGTGACTCCAAGCTTCATGTCATGCTTCTCGC
CAATGCAGTCGCTCGGCGGTTCAAAAACACTTCAGTGACTTCAGTGCACC
CCGGATGGGTGGCGACAAAGCTTGGCGGACAGGGTGCTCCAGATAAACTG
GAGGACGGTGTCGAAACGTATGTCATGTTGGCCGAAGGGGATTATGATGA
ACAGAACCTGTCTGGAGCTTATTTTGAGCCCAAGAGGAAGATTGGCCAGC
CGATTCCGGCTGCAAGAGATGAGGATCTGCAAGAGAAGGTGGTGCAAGCC
TGCGAAGAGGTTACTGGATTGAGACTGTCGGCTTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009256KJC3_009256Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009256-T1KJC3_009256-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009256-T1.utr5p1KJC3_009256-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_009256-T1.utr5p2KJC3_009256-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009256-T1.exon1KJC3_009256-T1.exon1Aspergillus niger KJC3exon
KJC3_009256-T1.exon2KJC3_009256-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009256-T1.cdsKJC3_009256-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009256-T1.utr3p1KJC3_009256-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.22
NoteSMCOG1001:short-chain dehydrogenase/reductase SDR
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4999854..5001372 +
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