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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:5009091..5010679- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009260-T1 ID=KJC3_009260-T1|Name=KJC3_009260-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1589bp|location=Sequence derived from alignment at ch6:5009091..5010679- (Aspergillus niger KJC3)
CTCATATCGTTCCCCCCTCGAGATTTCGTATCCTGCGCTTTTCCTCCTTT
CTCCTCTCCCTCCTCCCCCCATTCCGACAACCGAGCCACAGAAAGAGCAG
TGAAAACTCGCCTCTTCTACAGCCCACTGGTAATCCATTATCTGCATTGC
TCCCACCTCGCCACAACCACAACCCCTCCTTCTACTTCTCATGGCGGGTA
CCAGACTGAACGGTGGGATCGCCCTTGTGACTGGTGTAAGTCGGTCATTG
CTTTTTGCCTCCATCGTATCGAGAACCCACAAAAGCAAAGATTGAATCGA
ATGTGACTGAGAACTCAATCTGCAGGCCGCATCAGGCATTGGGAAAGATG
CCTGCTTCGCTCTCGCCGAAGCCGGCGTCGAAGCAATCCTCCTGGCGGAC
CTCAATCTTCCTACAGATCCCACTCTTCAAGAGTGTCAAAAGTTCGCCTC
CCACCCCAACTTCCGTGCCCTGTCGGTAGTGGTAGACGTCACCGATGAGG
CCAGCGTCGACAATATGGTCCAGCGCGCCGTGAATGAGCTCGGGCGTATT
GACTACTGCGTGCACTCCGCGGGTATCTCTGGAAACTCGCGCACCCGCAC
CGCAACCCTGAACGTCGACGCATTCGACCAATCCATGAGAACCAACTCCC
GTGGGCCTATGCTGGTGCTGCGGGCCGTCTCCCAAGCCATGTCGCTGCAA
GAGCCACGCTCGTACACCAGCACGCGCAGCAACACGACCCGCAGTCTAGG
CCGCGGGTCGATTGTCGTGCTATCTTCGATCAATGGCCTGATCTCAGTGC
CCGGAATGATGCCGTATACGGCATCCAAGCACGCGACCATCGGGATCGCC
CAAACTGCCGCCGTCGACAACTTTGAGCATCACATCCGCGTAAACATTGT
ATGTCCGTCATGGACCGATACTCCCATGATGCAGAAGACAATCAGCAACG
TCCCTACCCTGGAGCAGGCCATTGCGAAACTGTGTCCTCTCGGGAGGATC
GCCATGCCAGAGGAGGTATCTGATGCGGTCGTGTTTCTCTGTAGCCCCGC
CGCTTCCTTTATCAATGGAGAAAGTCTGGTGATTGATGCAGGCTTCACTT
TGACGGGGTTCCGGATGGGCCACTAAATGCTGCGATTGCAGTCGAGCGAG
GTTTGGTAGATGCTAGGGGCCATAAAAAGGATTGATTCCATCTGTTTCAA
AATCTCTTCGATGGAATGCGATCATTGATTCCTGCTGCCTAATACTATGT
TTATAGCTTCGCGGGGTTTCCCAGCGCAGGGTTTGACCGTTGCAAAGGGC
CACTTCAATCCCTTCCATGCAAGTGAGACGCTTACTGGCACGTTCTATAT
ACGAGTTAGTAGCGGCAAAATGCATTCATACTGTAGGACTGCATTGGCCA
TGATCCAATGTCTGTATCTGAGTGACCTCGACATAGAGTGTGTACTGGAT
CAAACCAGGGGTGAGCATCTAGGAGTACAATCAACACATCTAATCGTTGA
TATCCGTCTACCCCATCGTGATACTGCTTTCCTTCAACACAAAACCCCAA
ATGGATGTCGGCATACAGAACTGCCCCCTCCATGAGCAC back to topCoding sequence (CDS) from alignment at ch6:5009091..5010679- >KJC3_009260-T1 ID=KJC3_009260-T1|Name=KJC3_009260-T1|organism=Aspergillus niger KJC3|type=CDS|length=1692bp|location=Sequence derived from alignment at ch6:5009091..5010679- (Aspergillus niger KJC3)
GCCGCATCAGGCATTGGGAAAGATGCCTGCTTCGCTCTCGCCGAAGCCGG
CGTCGAAGCAATCCTCCTGGCGGACCTCAATCTTCCTACAGATCCCACTC
TTCAAGAGTGTCAAAAGTTCGCCTCCCACCCCAACTTCCGTGCCCTGTCG
GTAGTGGTAGACGTCACCGATGAGGCCAGCGTCGACAATATGGTCCAGCG
CGCCGTGAATGAGCTCGGGCGTATTGACTACTGCGTGCACTCCGCGGGTA
TCTCTGGAAACTCGCGCACCCGCACCGCAACCCTGAACGTCGACGCATTC
GACCAATCCATGAGAACCAACTCCCGTGGGCCTATGCTGGTGCTGCGGGC
CGTCTCCCAAGCCATGTCGCTGCAAGAGCCACGCTCGTACACCAGCACGC
GCAGCAACACGACCCGCAGTCTAGGCCGCGGGTCGATTGTCGTGCTATCT
TCGATCAATGGCCTGATCTCAGTGCCCGGAATGATGCCGTATACGGCATC
CAAGCACGCGACCATCGGGATCGCCCAAACTGCCGCCGTCGACAACTTTG
AGCATCACATCCGCGTAAACATTGTATGTCCGTCATGGACCGATACTCCC
ATGATGCAGAAGACAATCAGCAACGTCCCTACCCTGGAGCAGGCCATTGC
GAAACTGTGTCCTCTCGGGAGGATCGCCATGCCAGAGGAGGTATCTGATG
CGGTCGTGTTTCTCTGTAGCCCCGCCGCTTCCTTTATCAATGGAGAAAGT
CTGGTGATTGATGCAGGCTTCACTTTGACGGGGTTCCGGATGGGCCACTA
AATGGCGGGTACCAGACTGAACGGTGGGATCGCCCTTGTGACTGGTGCCG
CATCAGGCATTGGGAAAGATGCCTGCTTCGCTCTCGCCGAAGCCGGCGTC
GAAGCAATCCTCCTGGCGGACCTCAATCTTCCTACAGATCCCACTCTTCA
AGAGTGTCAAAAGTTCGCCTCCCACCCCAACTTCCGTGCCCTGTCGGTAG
TGGTAGACGTCACCGATGAGGCCAGCGTCGACAATATGGTCCAGCGCGCC
GTGAATGAGCTCGGGCGTATTGACTACTGCGTGCACTCCGCGGGTATCTC
TGGAAACTCGCGCACCCGCACCGCAACCCTGAACGTCGACGCATTCGACC
AATCCATGAGAACCAACTCCCGTGGGCCTATGCTGGTGCTGCGGGCCGTC
TCCCAAGCCATGTCGCTGCAAGAGCCACGCTCGTACACCAGCACGCGCAG
CAACACGACCCGCAGTCTAGGCCGCGGGTCGATTGTCGTGCTATCTTCGA
TCAATGGCCTGATCTCAGTGCCCGGAATGATGCCGTATACGGCATCCAAG
CACGCGACCATCGGGATCGCCCAAACTGCCGCCGTCGACAACTTTGAGCA
TCACATCCGCGTAAACATTGTATGTCCGTCATGGACCGATACTCCCATGA
TGCAGAAGACAATCAGCAACGTCCCTACCCTGGAGCAGGCCATTGCGAAA
CTGTGTCCTCTCGGGAGGATCGCCATGCCAGAGGAGGTATCTGATGCGGT
CGTGTTTCTCTGTAGCCCCGCCGCTTCCTTTATCAATGGAGAAAGTCTGG
TGATTGATGCAGGCTTCACTTTGACGGGGTTCCGGATGGGCCACTAAATG
GCGGGTACCAGACTGAACGGTGGGATCGCCCTTGTGACTGGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009260-T1.utr3p1 | KJC3_009260-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009260-T1.utr5p1 | KJC3_009260-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.22 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:5009091..5010679 - |
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