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KJC3_009260-T2, KJC3_009260-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009260-T2
Unique NameKJC3_009260-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:5009091..5010679-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009260-T2 ID=KJC3_009260-T2|Name=KJC3_009260-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1589bp|location=Sequence derived from alignment at ch6:5009091..5010679- (Aspergillus niger KJC3)
CTCATATCGTTCCCCCCTCGAGATTTCGTATCCTGCGCTTTTCCTCCTTT
CTCCTCTCCCTCCTCCCCCCATTCCGACAACCGAGCCACAGAAAGAGCAG
TGAAAACTCGCCTCTTCTACAGCCCACTGGTAATCCATTATCTGCATTGC
TCCCACCTCGCCACAACCACAACCCCTCCTTCTACTTCTCATGGCGGGTA
CCAGACTGAACGGTGGGATCGCCCTTGTGACTGGTGTAAGTCGGTCATTG
CTTTTTGCCTCCATCGTATCGAGAACCCACAAAAGCAAAGATTGAATCGA
ATGTGACTGAGAACTCAATCTGCAGGCCGCATCAGGCATTGGGAAAGATG
CCTGCTTCGCTCTCGCCGAAGCCGGCGTCGAAGCAATCCTCCTGGCGGAC
CTCAATCTTCCTACAGATCCCACTCTTCAAGAGTGTCAAAAGTTCGCCTC
CCACCCCAACTTCCGTGCCCTGTCGGTAGTGGTAGACGTCACCGATGAGG
CCAGCGTCGACAATATGGTCCAGCGCGCCGTGAATGAGCTCGGGCGTATT
GACTACTGCGTGCACTCCGCGGGTATCTCTGGAAACTCGCGCACCCGCAC
CGCAACCCTGAACGTCGACGCATTCGACCAATCCATGAGAACCAACTCCC
GTGGGCCTATGCTGGTGCTGCGGGCCGTCTCCCAAGCCATGTCGCTGCAA
GAGCCACGCTCGTACACCAGCACGCGCAGCAACACGACCCGCAGTCTAGG
CCGCGGGTCGATTGTCGTGCTATCTTCGATCAATGGCCTGATCTCAGTGC
CCGGAATGATGCCGTATACGGCATCCAAGCACGCGACCATCGGGATCGCC
CAAACTGCCGCCGTCGACAACTTTGAGCATCACATCCGCGTAAACATTGT
ATGTCCGTCATGGACCGATACTCCCATGATGCAGAAGACAATCAGCAACG
TCCCTACCCTGGAGCAGGCCATTGCGAAACTGTGTCCTCTCGGGAGGATC
GCCATGCCAGAGGAGGTATCTGATGCGGTCGTGTTTCTCTGTAGCCCCGC
CGCTTCCTTTATCAATGGAGAAAGTCTGGTGATTGATGCAGGCTTCACTT
TGACGGGGTTCCGGATGGGCCACTAAATGCTGCGATTGCAGTCGAGCGAG
GTTTGGTAGATGCTAGGGGCCATAAAAAGGATTGATTCCATCTGTTTCAA
AATCTCTTCGATGGAATGCGATCATTGATTCCTGCTGCCTAATACTATGT
TTATAGCTTCGCGGGGTTTCCCAGCGCAGGGTTTGACCGTTGCAAAGGGC
CACTTCAATCCCTTCCATGCAAGTGAGACGCTTACTGGCACGTTCTATAT
ACGAGTTAGTAGCGGCAAAATGCATTCATACTGTAGGACTGCATTGGCCA
TGATCCAATGTCTGTATCTGAGTGACCTCGACATAGAGTGTGTACTGGAT
CAAACCAGGGGTGAGCATCTAGGAGTACAATCAACACATCTAATCGTTGA
TATCCGTCTACCCCATCGTGATACTGCTTTCCTTCAACACAAAACCCCAA
ATGGATGTCGGCATACAGAACTGCCCCCTCCATGAGCAC
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Coding sequence (CDS) from alignment at ch6:5009091..5010679-

>KJC3_009260-T2 ID=KJC3_009260-T2|Name=KJC3_009260-T2|organism=Aspergillus niger KJC3|type=CDS|length=612bp|location=Sequence derived from alignment at ch6:5009091..5010679- (Aspergillus niger KJC3)
ATGGTCCAGCGCGCCGTGAATGAGCTCGGGCGTATTGACTACTGCGTGCA
CTCCGCGGGTATCTCTGGAAACTCGCGCACCCGCACCGCAACCCTGAACG
TCGACGCATTCGACCAATCCATGAGAACCAACTCCCGTGGGCCTATGCTG
GTGCTGCGGGCCGTCTCCCAAGCCATGTCGCTGCAAGAGCCACGCTCGTA
CACCAGCACGCGCAGCAACACGACCCGCAGTCTAGGCCGCGGGTCGATTG
TCGTGCTATCTTCGATCAATGGCCTGATCTCAGTGCCCGGAATGATGCCG
TATACGGCATCCAAGCACGCGACCATCGGGATCGCCCAAACTGCCGCCGT
CGACAACTTTGAGCATCACATCCGCGTAAACATTGTATGTCCGTCATGGA
CCGATACTCCCATGATGCAGAAGACAATCAGCAACGTCCCTACCCTGGAG
CAGGCCATTGCGAAACTGTGTCCTCTCGGGAGGATCGCCATGCCAGAGGA
GGTATCTGATGCGGTCGTGTTTCTCTGTAGCCCCGCCGCTTCCTTTATCA
ATGGAGAAAGTCTGGTGATTGATGCAGGCTTCACTTTGACGGGGTTCCGG
ATGGGCCACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009260KJC3_009260Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009260-T2KJC3_009260-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009260-T2.cdsKJC3_009260-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009260-T2.utr3p1KJC3_009260-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009260-T2.exon2KJC3_009260-T2.exon2Aspergillus niger KJC3exon
KJC3_009260-T2.exon1KJC3_009260-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009260-T2.utr5p2KJC3_009260-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009260-T2.utr5p1KJC3_009260-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.22
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Product variant 2
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:5009091..5010679 -
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