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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:5032402..5034758+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009267-T1 ID=KJC3_009267-T1|Name=KJC3_009267-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2357bp|location=Sequence derived from alignment at ch6:5032402..5034758+ (Aspergillus niger KJC3)
CAGCGGAGCTGCCTCTTGAAAAAGGGCACGAGGGTAGCTGCGGCGACATG
CAGAGAGAGATGGAGAGTATGCTAAATTTCCTAGCGTATGACACAATTCC
AACGTTTTCTTTACATCCACCGCAATGGCTGTCACCATGCATGATTCTGT
CCTGGACAGCAACAAGGCCAACATGACCGGTTTCAAAGCTGAGGTCGTCG
TTAAGGAGCTGGAATGCCCTTCCCCAAAGCCTCCCGTTGACGACAACTTT
ATGTATGACTTCAAATATAATCATGTCTTACCCACTTCAGACATTCTGAG
GATCGAAATTCCCATGGACTGCGATGCCCAAAGGGAGGCCGGAGACATCG
TAGCGCGGCTGTCGCAGGCAATGGGAGCTCGGGATGCTCAGACATTTGCT
GAGATGTTCCTTCCATACGGTGAAATCTAATTCTCCCCGTTCGTGCAGGC
ATCCTTTAACATGTCCTTCTCGGTACAGGCGTTTGGCGTGACAAGTTGTC
CTTCACCTGGGATTACCGCACTTTCAATTTTTACCCAGCAATCCTCAGGG
CTGCCACGGACCTTTTCCCTCAAACGAAAGCCACCGATTTCAAGTTCCTC
ACCCCGGCTCCCACGATTTCCCGGCCCTATCCGGACTTTGCTCAACTGCA
GTTCGTTGTGTGCTTTGAGACTGAAGTCGTGGTTTCTTCAGCCGTGATCA
ATGCAGTCTTCACCCAGGAGGGGTGGAAGATTTATACAATGCACACCGTT
GCAGAGAAGCTGAAACAGTTTCCCGAAATTCCTCCACCCGACGGGCATAT
GACGGGTTCCATTAGCTGGGAAAAGCAAAGAGCTGCGGAAATCGATGCTG
CCAACCCTGAGATACTGATCATTGGTGGCGGCCAAAAGTTAGTCTATCTC
TTCCACGTCTCGATGAACCGTACTGACCCTTTGTTTCCTTCAATAGTGGC
CTCGCACTAGCCGCCAGATGCAAGGCACTTGGTATGGATAGTCTCATAAT
CGAGCGCAGCGAAGAAATCGGCGATGTCTGGAAGAAGCGTTATGAGTACC
TATCACTTCACTTCCCCCACTGGGCTGATGATTTGCCTTACTTTCCATAC
CCCAAGCTTTGGCCCACGTACACACCCGCTCAGAAGCAAGGAATGTACAT
GAAGTGGTATGCGGAGGCCCTGGAATTGAATGTTTGGACCAAATCGGAGG
TCGTGAAGGCAGAGCAAGACGACCAGCATAACTGGACGGTCGTGATCAAC
AAAGAAGGTCAAGAAACCAGACAACTGCACCCCAAACAGGTCATCATGGC
TACCTCCCTTTGCGGCGTCCCCATGACCCCAGAAATTCCTGGTATGGCCG
ATTTCAAGGCAGGTGTTATCCGCCACTCAACGGCCCACGACAGTGCGCGT
GAATTTGTGGGTAAGAAGGTCTGTGTCGTTGGTACCTCATCCTCTGGCTT
CGATACGGCCTTCGATTGCTCCCGCCGGGGCATCGATGTTACACTCCTTC
AACGGTCCCCGACCTACATCATGTCGCTGACCCACTCCGTCCCGCGCACG
ATCGGTAACTATGGTCCTGACGCCGAAGGCAACCGGCCTAGCCATGAGGA
ACAAGACCGCCTTTTCTTTGCCACACCTACTGGACCTGGGGAAGAGCTCG
CCAGACGTAATGCCAAGGTGTTGGAAGACCTTGACCGGCCTCTTCTGGAT
GCACTTCATGCTCGCGGTCTCCGGACCTGGCGTGGTCAGCGCGGCACGGG
CGGTTCCACCCTCGGCCAGACCCGGAACGGTGGCTTTTATTTCGATGCCG
GTGCGTGTGAGCACATCATCAATGGCAAGATCAAGGTAGAGCCAGGGTAC
ATTGAGCGGTTCACGGAGGACAAGGTAATCCTCAACGATGGGCGTGAGCG
CCAATTCGACCTGATCGTCTTCGCTACCGGCTTCTCCAACACCATTGACT
CGGTCCGTGCCACTCTAGGTGACAGGATCGCCGACAAATGCGGTCCTATC
TGGGGTATTGATGAGGAGGGTGAGTTCAAAACTGCGTACCGGCAGACTGG
AGTGCCCAATCTCTGGCTCATGGTCGGCTATCTCCCCTACACCCGCTTCC
ATTCCAAACTGCTCGCTATGCGTATAAAGGCTCTGATGGAAGGTATATCT
CCGGCTCCATACAAGAACTAGACCTTATTTCCTCTACACCCAAGGACCTC
ATAGACGATATAACTACGATAAACATTGCTTTCAGAATGCGCCTGTATGA
TCACATTATTTACAGATTATTGTGTGGGCAGGATTTGCCAACCCCACCTC
AAGGGGAGGGAGGATGTACGTCTCGTGGCCTGTCTAGCCTAAGTACGCGA
ATTCAAC back to topCoding sequence (CDS) from alignment at ch6:5032402..5034758+ >KJC3_009267-T1 ID=KJC3_009267-T1|Name=KJC3_009267-T1|organism=Aspergillus niger KJC3|type=CDS|length=5787bp|location=Sequence derived from alignment at ch6:5032402..5034758+ (Aspergillus niger KJC3)
ATGGCTGTCACCATGCATGATTCTGTCCTGGACAGCAACAAGGCCAACAT
GACCGGTTTCAAAGCTGAGGTCGTCGTTAAGGAGCTGGAATGCCCTTCCC
CAAAGCCTCCCGTTGACGACAACTTTATGTATGACTTCAAATATAATCAT
GTCTTACCCACTTCAGACATTCTGAGGATCGAAATTCCCATGGACTGCGA
TGCCCAAAGGGAGGCCGGAGACATCGTAGCGCGGCTGTCGCAGGCAATGG
GAGCTCGGGATGCTCAGACATTTGCTGAGATGTTCCTTCCATACGGCGTT
TGGCGTGACAAGTTGTCCTTCACCTGGGATTACCGCACTTTCAATTTTTA
CCCAGCAATCCTCAGGGCTGCCACGGACCTTTTCCCTCAAACGAAAGCCA
CCGATTTCAAGTTCCTCACCCCGGCTCCCACGATTTCCCGGCCCTATCCG
GACTTTGCTCAACTGCAGTTCGTTGTGTGCTTTGAGACTGAAGTCGTGGT
TTCTTCAGCCGTGATCAATGCAGTCTTCACCCAGGAGGGGTGGAAGATTT
ATACAATGCACACCGTTGCAGAGAAGCTGAAACAGTTTCCCGAAATTCCT
CCACCCGACGGGCATATGACGGGTTCCATTAGCTGGGAAAAGCAAAGAGC
TGCGGAAATCGATGCTGCCAACCCTGAGATACTGATCATTGGTGGCGGCC
AAAATGGCCTCGCACTAGCCGCCAGATGCAAGGCACTTGGTATGGATAGT
CTCATAATCGAGCGCAGCGAAGAAATCGGCGATGTCTGGAAGAAGCGTTA
TGAGTACCTATCACTTCACTTCCCCCACTGGGCTGATGATTTGCCTTACT
TTCCATACCCCAAGCTTTGGCCCACGTACACACCCGCTCAGAAGCAAGGA
ATGTACATGAAGTGGTATGCGGAGGCCCTGGAATTGAATGTTTGGACCAA
ATCGGAGGTCGTGAAGGCAGAGCAAGACGACCAGCATAACTGGACGGTCG
TGATCAACAAAGAAGGTCAAGAAACCAGACAACTGCACCCCAAACAGGTC
ATCATGGCTACCTCCCTTTGCGGCGTCCCCATGACCCCAGAAATTCCTGG
TATGGCCGATTTCAAGGCAGGTGTTATCCGCCACTCAACGGCCCACGACA
GTGCGCGTGAATTTGTGGGTAAGAAGGTCTGTGTCGTTGGTACCTCATCC
TCTGGCTTCGATACGGCCTTCGATTGCTCCCGCCGGGGCATCGATGTTAC
ACTCCTTCAACGGTCCCCGACCTACATCATGTCGCTGACCCACTCCGTCC
CGCGCACGATCGGTAACTATGGTCCTGACGCCGAAGGCAACCGGCCTAGC
CATGAGGAACAAGACCGCCTTTTCTTTGCCACACCTACTGGACCTGGGGA
AGAGCTCGCCAGACGTAATGCCAAGGTGTTGGAAGACCTTGACCGGCCTC
TTCTGGATGCACTTCATGCTCGCGGTCTCCGGACCTGGCGTGGTCAGCGC
GGCACGGGCGGTTCCACCCTCGGCCAGACCCGGAACGGTGGCTTTTATTT
CGATGCCGGTGCGTGTGAGCACATCATCAATGGCAAGATCAAGGTAGAGC
CAGGGTACATTGAGCGGTTCACGGAGGACAAGGTAATCCTCAACGATGGG
CGTGAGCGCCAATTCGACCTGATCGTCTTCGCTACCGGCTTCTCCAACAC
CATTGACTCGGTCCGTGCCACTCTAGGTGACAGGATCGCCGACAAATGCG
GTCCTATCTGGGGTATTGATGAGGAGGGTGAGTTCAAAACTGCGTACCGG
CAGACTGGAGTGCCCAATCTCTGGCTCATGGTCGGCTATCTCCCCTACAC
CCGCTTCCATTCCAAACTGCTCGCTATGCGTATAAAGGCTCTGATGGAAG
GTATATCTCCGGCTCCATACAAGAACTAGATGGCTGTCACCATGCATGAT
TCTGTCCTGGACAGCAACAAGGCCAACATGACCGGTTTCAAAGCTGAGGT
CGTCGTTAAGGAGCTGGAATGCCCTTCCCCAAAGCCTCCCGTTGACGACA
ACTTTATGTATGACTTCAAATATAATCATGTCTTACCCACTTCAGACATT
CTGAGGATCGAAATTCCCATGGACTGCGATGCCCAAAGGGAGGCCGGAGA
CATCGTAGCGCGGCTGTCGCAGGCAATGGGAGCTCGGGATGCTCAGACAT
TTGCTGAGATGTTCCTTCCATACGGCGTTTGGCGTGACAAGTTGTCCTTC
ACCTGGGATTACCGCACTTTCAATTTTTACCCAGCAATCCTCAGGGCTGC
CACGGACCTTTTCCCTCAAACGAAAGCCACCGATTTCAAGTTCCTCACCC
CGGCTCCCACGATTTCCCGGCCCTATCCGGACTTTGCTCAACTGCAGTTC
GTTGTGTGCTTTGAGACTGAAGTCGTGGTTTCTTCAGCCGTGATCAATGC
AGTCTTCACCCAGGAGGGGTGGAAGATTTATACAATGCACACCGTTGCAG
AGAAGCTGAAACAGTTTCCCGAAATTCCTCCACCCGACGGGCATATGACG
GGTTCCATTAGCTGGGAAAAGCAAAGAGCTGCGGAAATCGATGCTGCCAA
CCCTGAGATACTGATCATTGGTGGCGGCCAAAATGGCCTCGCACTAGCCG
CCAGATGCAAGGCACTTGGTATGGATAGTCTCATAATCGAGCGCAGCGAA
GAAATCGGCGATGTCTGGAAGAAGCGTTATGAGTACCTATCACTTCACTT
CCCCCACTGGGCTGATGATTTGCCTTACTTTCCATACCCCAAGCTTTGGC
CCACGTACACACCCGCTCAGAAGCAAGGAATGTACATGAAGTGGTATGCG
GAGGCCCTGGAATTGAATGTTTGGACCAAATCGGAGGTCGTGAAGGCAGA
GCAAGACGACCAGCATAACTGGACGGTCGTGATCAACAAAGAAGGTCAAG
AAACCAGACAACTGCACCCCAAACAGGTCATCATGGCTACCTCCCTTTGC
GGCGTCCCCATGACCCCAGAAATTCCTGGTATGGCCGATTTCAAGGCAGG
TGTTATCCGCCACTCAACGGCCCACGACAGTGCGCGTGAATTTGTGGGTA
AGAAGGTCTGTGTCGTTGGTACCTCATCCTCTGGCTTCGATACGGCCTTC
GATTGCTCCCGCCGGGGCATCGATGTTACACTCCTTCAACGGTCCCCGAC
CTACATCATGTCGCTGACCCACTCCGTCCCGCGCACGATCGGTAACTATG
GTCCTGACGCCGAAGGCAACCGGCCTAGCCATGAGGAACAAGACCGCCTT
TTCTTTGCCACACCTACTGGACCTGGGGAAGAGCTCGCCAGACGTAATGC
CAAGGTGTTGGAAGACCTTGACCGGCCTCTTCTGGATGCACTTCATGCTC
GCGGTCTCCGGACCTGGCGTGGTCAGCGCGGCACGGGCGGTTCCACCCTC
GGCCAGACCCGGAACGGTGGCTTTTATTTCGATGCCGGTGCGTGTGAGCA
CATCATCAATGGCAAGATCAAGGTAGAGCCAGGGTACATTGAGCGGTTCA
CGGAGGACAAGGTAATCCTCAACGATGGGCGTGAGCGCCAATTCGACCTG
ATCGTCTTCGCTACCGGCTTCTCCAACACCATTGACTCGGTCCGTGCCAC
TCTAGGTGACAGGATCGCCGACAAATGCGGTCCTATCTGGGGTATTGATG
AGGAGGGTGAGTTCAAAACTGCGTACCGGCAGACTGGAGTGCCCAATCTC
TGGCTCATGGTCGGCTATCTCCCCTACACCCGCTTCCATTCCAAACTGCT
CGCTATGCGTATAAAGGCTCTGATGGAAGGTATATCTCCGGCTCCATACA
AGAACTAGATGGCTGTCACCATGCATGATTCTGTCCTGGACAGCAACAAG
GCCAACATGACCGGTTTCAAAGCTGAGGTCGTCGTTAAGGAGCTGGAATG
CCCTTCCCCAAAGCCTCCCGTTGACGACAACTTTATGTATGACTTCAAAT
ATAATCATGTCTTACCCACTTCAGACATTCTGAGGATCGAAATTCCCATG
GACTGCGATGCCCAAAGGGAGGCCGGAGACATCGTAGCGCGGCTGTCGCA
GGCAATGGGAGCTCGGGATGCTCAGACATTTGCTGAGATGTTCCTTCCAT
ACGGCGTTTGGCGTGACAAGTTGTCCTTCACCTGGGATTACCGCACTTTC
AATTTTTACCCAGCAATCCTCAGGGCTGCCACGGACCTTTTCCCTCAAAC
GAAAGCCACCGATTTCAAGTTCCTCACCCCGGCTCCCACGATTTCCCGGC
CCTATCCGGACTTTGCTCAACTGCAGTTCGTTGTGTGCTTTGAGACTGAA
GTCGTGGTTTCTTCAGCCGTGATCAATGCAGTCTTCACCCAGGAGGGGTG
GAAGATTTATACAATGCACACCGTTGCAGAGAAGCTGAAACAGTTTCCCG
AAATTCCTCCACCCGACGGGCATATGACGGGTTCCATTAGCTGGGAAAAG
CAAAGAGCTGCGGAAATCGATGCTGCCAACCCTGAGATACTGATCATTGG
TGGCGGCCAAAATGGCCTCGCACTAGCCGCCAGATGCAAGGCACTTGGTA
TGGATAGTCTCATAATCGAGCGCAGCGAAGAAATCGGCGATGTCTGGAAG
AAGCGTTATGAGTACCTATCACTTCACTTCCCCCACTGGGCTGATGATTT
GCCTTACTTTCCATACCCCAAGCTTTGGCCCACGTACACACCCGCTCAGA
AGCAAGGAATGTACATGAAGTGGTATGCGGAGGCCCTGGAATTGAATGTT
TGGACCAAATCGGAGGTCGTGAAGGCAGAGCAAGACGACCAGCATAACTG
GACGGTCGTGATCAACAAAGAAGGTCAAGAAACCAGACAACTGCACCCCA
AACAGGTCATCATGGCTACCTCCCTTTGCGGCGTCCCCATGACCCCAGAA
ATTCCTGGTATGGCCGATTTCAAGGCAGGTGTTATCCGCCACTCAACGGC
CCACGACAGTGCGCGTGAATTTGTGGGTAAGAAGGTCTGTGTCGTTGGTA
CCTCATCCTCTGGCTTCGATACGGCCTTCGATTGCTCCCGCCGGGGCATC
GATGTTACACTCCTTCAACGGTCCCCGACCTACATCATGTCGCTGACCCA
CTCCGTCCCGCGCACGATCGGTAACTATGGTCCTGACGCCGAAGGCAACC
GGCCTAGCCATGAGGAACAAGACCGCCTTTTCTTTGCCACACCTACTGGA
CCTGGGGAAGAGCTCGCCAGACGTAATGCCAAGGTGTTGGAAGACCTTGA
CCGGCCTCTTCTGGATGCACTTCATGCTCGCGGTCTCCGGACCTGGCGTG
GTCAGCGCGGCACGGGCGGTTCCACCCTCGGCCAGACCCGGAACGGTGGC
TTTTATTTCGATGCCGGTGCGTGTGAGCACATCATCAATGGCAAGATCAA
GGTAGAGCCAGGGTACATTGAGCGGTTCACGGAGGACAAGGTAATCCTCA
ACGATGGGCGTGAGCGCCAATTCGACCTGATCGTCTTCGCTACCGGCTTC
TCCAACACCATTGACTCGGTCCGTGCCACTCTAGGTGACAGGATCGCCGA
CAAATGCGGTCCTATCTGGGGTATTGATGAGGAGGGTGAGTTCAAAACTG
CGTACCGGCAGACTGGAGTGCCCAATCTCTGGCTCATGGTCGGCTATCTC
CCCTACACCCGCTTCCATTCCAAACTGCTCGCTATGCGTATAAAGGCTCT
GATGGAAGGTATATCTCCGGCTCCATACAAGAACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009267-T1.utr5p1 | KJC3_009267-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009267-T1.utr3p1 | KJC3_009267-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.22 |
| Note | SMCOG1092:hypothetical protein |
| DBxref | InterPro:IPR032710 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF13738 |
| DBxref | PFAM:PF07992 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:5032402..5034758 + |
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