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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:5037478..5038838- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009269-T1 ID=KJC3_009269-T1|Name=KJC3_009269-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1361bp|location=Sequence derived from alignment at ch6:5037478..5038838- (Aspergillus niger KJC3)
ATGTCCCCTTGGAACGTTATGCAGTACAGACTTTTGTTGGCAGGCGACAG
AGCCGACTTCACCACGCTTGGACTCGACCTGAAGACAGGGAAATTGAGCA
TTCTTGCTAATTATGCAGCCCCCTTCAATGCTTCATGGGTCGAGCTATCG
TCATCACAAAGGGGCCTTGATCAACTTGTGGGTCTATCCGAGGGGGTCGA
GTCTGGTCTTTTGTATACCTTTGAAATAGATCACCTAAAAAGGGCTTGCA
CAATTACCAGCCAGTTGCCAACTCTGGGGGCGCCAGGTCACTGTAGGTAG
ACACATCACTCAGTTTACCACACGGTTCTTATTGGTGACAATCTGGTCTT
ACTAGTCATCAAGTTGCGTGATAATGCTGCACTGGCTCTTGGCACGGTTA
GTCTACATCAGGTTCCCGTTCCGGAACATCTACTGACATTTCACTTCATG
TAGTATCTGGGAGGATCTATTGCCCTCTATCCGATTTCCATGACAGACGA
TGGCAAGATGCTGCTCCAAAACGCTCCCCGAGCAGAAATTCTACCGGACT
TTCCATATCATTCGGTTGGACACGGTCCTAACAAGGGCCGTCAGCAACAA
TGCCATGTGCATCAAATATTGGAAGACAGCCGAGGCATACTATACGCCCC
AGATCTGGGATCCGATAGGGTTTGGATACTTCGGCGTGACGGTGTTCAGC
ATCTTGAAGTTTGCGGCTGGCTACAGTGCCCTCCCGGAACAGGCGCTCGA
CATGCCGTATTGACTCCCAATGGTATGTACCCTTACTCAACACGGTGCTC
CCATATCCCGGAGCTAGCTGACTTAAATTGCAAGAGACGATAATGTACGT
TATTGGTGAACTCTCGCACACAGTCATCGCCTTTGATGTATCAGCTGCCC
CCGCAGAGGGCATTCCGCCGATTGATGGCTTCGCACCGAGTATAATCCCC
CCGGAGGTTCACCCTGATCATCAAGGCATGATGGACTCTGCCGAAATTTG
TCTTCATCCCTCCCTTCCTAATGTTATCTACGCCAGTAATCGCTGGGAGA
GGCACATCGCGCAGCGTGAACCATACCTCCGCAATGTGCCTCGTGATCTA
CCGCCGGGAGATGCAATCGCTATTATTCTGCTCTCCAGCGATGGCAGGAA
GGTCATCGACATCAAGCAAGTACGGACGGGTGTTGATGTCATCCGTGGCA
TGCGGCTCAGTGACGACGGCAGATATGTCGTTGTAGTTGGACAAGAAGGG
GGTGGCGTGGAGGTCTATGAAATCAACGGGGACAAGGGAGACGAGTGGAC
TTTAATAGCTGCCATGAAGGAGGGATTAGAGAACGGGATAAAGCATGCCA
TTTGGTTATAA back to topCoding sequence (CDS) from alignment at ch6:5037478..5038838- >KJC3_009269-T1 ID=KJC3_009269-T1|Name=KJC3_009269-T1|organism=Aspergillus niger KJC3|type=CDS|length=4716bp|location=Sequence derived from alignment at ch6:5037478..5038838- (Aspergillus niger KJC3)
AGACGATAATGTACGTTATTGGTGAACTCTCGCACACAGTCATCGCCTTT
GATGTATCAGCTGCCCCCGCAGAGGGCATTCCGCCGATTGATGGCTTCGC
ACCGAGTATAATCCCCCCGGAGGTTCACCCTGATCATCAAGGCATGATGG
ACTCTGCCGAAATTTGTCTTCATCCCTCCCTTCCTAATGTTATCTACGCC
AGTAATCGCTGGGAGAGGCACATCGCGCAGCGTGAACCATACCTCCGCAA
TGTGCCTCGTGATCTACCGCCGGGAGATGCAATCGCTATTATTCTGCTCT
CCAGCGATGGCAGGAAGGTCATCGACATCAAGCAAGTACGGACGGGTGTT
GATGTCATCCGTGGCATGCGGCTCAGTGACGACGGCAGATATGTCGTTGT
AGTTGGACAAGAAGGGGGTGGCGTGGAGGTCTATGAAATCAACGGGGACA
AGGGAGACGAGTGGACTTTAATAGCTGCCATGAAGGAGGGATTAGAGAAC
GGGATAAAGCATGCCATTTGGTTATAATATCTGGGAGGATCTATTGCCCT
CTATCCGATTTCCATGACAGACGATGGCAAGATGCTGCTCCAAAACGCTC
CCCGAGCAGAAATTCTACCGGACTTTCCATATCATTCGGTTGGACACGGT
CCTAACAAGGGCCGTCAGCAACAATGCCATGTGCATCAAATATTGGAAGA
CAGCCGAGGCATACTATACGCCCCAGATCTGGGATCCGATAGGGTTTGGA
TACTTCGGCGTGACGGTGTTCAGCATCTTGAAGTTTGCGGCTGGCTACAG
TGCCCTCCCGGAACAGGCGCTCGACATGCCGTATTGACTCCCAATGTCAT
CAAGTTGCGTGATAATGCTGCACTGGCTCTTGGCACGATGTCCCCTTGGA
ACGTTATGCAGTACAGACTTTTGTTGGCAGGCGACAGAGCCGACTTCACC
ACGCTTGGACTCGACCTGAAGACAGGGAAATTGAGCATTCTTGCTAATTA
TGCAGCCCCCTTCAATGCTTCATGGGTCGAGCTATCGTCATCACAAAGGG
GCCTTGATCAACTTGTGGGTCTATCCGAGGGGGTCGAGTCTGGTCTTTTG
TATACCTTTGAAATAGATCACCTAAAAAGGGCTTGCACAATTACCAGCCA
GTTGCCAACTCTGGGGGCGCCAGGTCACTAGACGATAATGTACGTTATTG
GTGAACTCTCGCACACAGTCATCGCCTTTGATGTATCAGCTGCCCCCGCA
GAGGGCATTCCGCCGATTGATGGCTTCGCACCGAGTATAATCCCCCCGGA
GGTTCACCCTGATCATCAAGGCATGATGGACTCTGCCGAAATTTGTCTTC
ATCCCTCCCTTCCTAATGTTATCTACGCCAGTAATCGCTGGGAGAGGCAC
ATCGCGCAGCGTGAACCATACCTCCGCAATGTGCCTCGTGATCTACCGCC
GGGAGATGCAATCGCTATTATTCTGCTCTCCAGCGATGGCAGGAAGGTCA
TCGACATCAAGCAAGTACGGACGGGTGTTGATGTCATCCGTGGCATGCGG
CTCAGTGACGACGGCAGATATGTCGTTGTAGTTGGACAAGAAGGGGGTGG
CGTGGAGGTCTATGAAATCAACGGGGACAAGGGAGACGAGTGGACTTTAA
TAGCTGCCATGAAGGAGGGATTAGAGAACGGGATAAAGCATGCCATTTGG
TTATAATATCTGGGAGGATCTATTGCCCTCTATCCGATTTCCATGACAGA
CGATGGCAAGATGCTGCTCCAAAACGCTCCCCGAGCAGAAATTCTACCGG
ACTTTCCATATCATTCGGTTGGACACGGTCCTAACAAGGGCCGTCAGCAA
CAATGCCATGTGCATCAAATATTGGAAGACAGCCGAGGCATACTATACGC
CCCAGATCTGGGATCCGATAGGGTTTGGATACTTCGGCGTGACGGTGTTC
AGCATCTTGAAGTTTGCGGCTGGCTACAGTGCCCTCCCGGAACAGGCGCT
CGACATGCCGTATTGACTCCCAATGTCATCAAGTTGCGTGATAATGCTGC
ACTGGCTCTTGGCACGATGTCCCCTTGGAACGTTATGCAGTACAGACTTT
TGTTGGCAGGCGACAGAGCCGACTTCACCACGCTTGGACTCGACCTGAAG
ACAGGGAAATTGAGCATTCTTGCTAATTATGCAGCCCCCTTCAATGCTTC
ATGGGTCGAGCTATCGTCATCACAAAGGGGCCTTGATCAACTTGTGGGTC
TATCCGAGGGGGTCGAGTCTGGTCTTTTGTATACCTTTGAAATAGATCAC
CTAAAAAGGGCTTGCACAATTACCAGCCAGTTGCCAACTCTGGGGGCGCC
AGGTCACTAGACGATAATGTACGTTATTGGTGAACTCTCGCACACAGTCA
TCGCCTTTGATGTATCAGCTGCCCCCGCAGAGGGCATTCCGCCGATTGAT
GGCTTCGCACCGAGTATAATCCCCCCGGAGGTTCACCCTGATCATCAAGG
CATGATGGACTCTGCCGAAATTTGTCTTCATCCCTCCCTTCCTAATGTTA
TCTACGCCAGTAATCGCTGGGAGAGGCACATCGCGCAGCGTGAACCATAC
CTCCGCAATGTGCCTCGTGATCTACCGCCGGGAGATGCAATCGCTATTAT
TCTGCTCTCCAGCGATGGCAGGAAGGTCATCGACATCAAGCAAGTACGGA
CGGGTGTTGATGTCATCCGTGGCATGCGGCTCAGTGACGACGGCAGATAT
GTCGTTGTAGTTGGACAAGAAGGGGGTGGCGTGGAGGTCTATGAAATCAA
CGGGGACAAGGGAGACGAGTGGACTTTAATAGCTGCCATGAAGGAGGGAT
TAGAGAACGGGATAAAGCATGCCATTTGGTTATAATATCTGGGAGGATCT
ATTGCCCTCTATCCGATTTCCATGACAGACGATGGCAAGATGCTGCTCCA
AAACGCTCCCCGAGCAGAAATTCTACCGGACTTTCCATATCATTCGGTTG
GACACGGTCCTAACAAGGGCCGTCAGCAACAATGCCATGTGCATCAAATA
TTGGAAGACAGCCGAGGCATACTATACGCCCCAGATCTGGGATCCGATAG
GGTTTGGATACTTCGGCGTGACGGTGTTCAGCATCTTGAAGTTTGCGGCT
GGCTACAGTGCCCTCCCGGAACAGGCGCTCGACATGCCGTATTGACTCCC
AATGTCATCAAGTTGCGTGATAATGCTGCACTGGCTCTTGGCACGATGTC
CCCTTGGAACGTTATGCAGTACAGACTTTTGTTGGCAGGCGACAGAGCCG
ACTTCACCACGCTTGGACTCGACCTGAAGACAGGGAAATTGAGCATTCTT
GCTAATTATGCAGCCCCCTTCAATGCTTCATGGGTCGAGCTATCGTCATC
ACAAAGGGGCCTTGATCAACTTGTGGGTCTATCCGAGGGGGTCGAGTCTG
GTCTTTTGTATACCTTTGAAATAGATCACCTAAAAAGGGCTTGCACAATT
ACCAGCCAGTTGCCAACTCTGGGGGCGCCAGGTCACTAGACGATAATGTA
CGTTATTGGTGAACTCTCGCACACAGTCATCGCCTTTGATGTATCAGCTG
CCCCCGCAGAGGGCATTCCGCCGATTGATGGCTTCGCACCGAGTATAATC
CCCCCGGAGGTTCACCCTGATCATCAAGGCATGATGGACTCTGCCGAAAT
TTGTCTTCATCCCTCCCTTCCTAATGTTATCTACGCCAGTAATCGCTGGG
AGAGGCACATCGCGCAGCGTGAACCATACCTCCGCAATGTGCCTCGTGAT
CTACCGCCGGGAGATGCAATCGCTATTATTCTGCTCTCCAGCGATGGCAG
GAAGGTCATCGACATCAAGCAAGTACGGACGGGTGTTGATGTCATCCGTG
GCATGCGGCTCAGTGACGACGGCAGATATGTCGTTGTAGTTGGACAAGAA
GGGGGTGGCGTGGAGGTCTATGAAATCAACGGGGACAAGGGAGACGAGTG
GACTTTAATAGCTGCCATGAAGGAGGGATTAGAGAACGGGATAAAGCATG
CCATTTGGTTATAATATCTGGGAGGATCTATTGCCCTCTATCCGATTTCC
ATGACAGACGATGGCAAGATGCTGCTCCAAAACGCTCCCCGAGCAGAAAT
TCTACCGGACTTTCCATATCATTCGGTTGGACACGGTCCTAACAAGGGCC
GTCAGCAACAATGCCATGTGCATCAAATATTGGAAGACAGCCGAGGCATA
CTATACGCCCCAGATCTGGGATCCGATAGGGTTTGGATACTTCGGCGTGA
CGGTGTTCAGCATCTTGAAGTTTGCGGCTGGCTACAGTGCCCTCCCGGAA
CAGGCGCTCGACATGCCGTATTGACTCCCAATGTCATCAAGTTGCGTGAT
AATGCTGCACTGGCTCTTGGCACGATGTCCCCTTGGAACGTTATGCAGTA
CAGACTTTTGTTGGCAGGCGACAGAGCCGACTTCACCACGCTTGGACTCG
ACCTGAAGACAGGGAAATTGAGCATTCTTGCTAATTATGCAGCCCCCTTC
AATGCTTCATGGGTCGAGCTATCGTCATCACAAAGGGGCCTTGATCAACT
TGTGGGTCTATCCGAGGGGGTCGAGTCTGGTCTTTTGTATACCTTTGAAA
TAGATCACCTAAAAAGGGCTTGCACAATTACCAGCCAGTTGCCAACTCTG
GGGGCGCCAGGTCACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.22 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR019405 |
| DBxref | PFAM:PF10282 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:5037478..5038838 - |
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