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KJC3_009273-T1, KJC3_009273-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009273-T1
Unique NameKJC3_009273-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:5049268..5050714-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009273-T1 ID=KJC3_009273-T1|Name=KJC3_009273-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1447bp|location=Sequence derived from alignment at ch6:5049268..5050714- (Aspergillus niger KJC3)
ATTCACACCCACATTATTAACTGCTGACTCACATCTACAGGCTACAAAGA
CGATGTCTGGTACAAGAGCCTATAACATCCTTGTCCTTCCCGGCGACGGC
ATCGGCCCGGAGGTCATGGCCGAAGCCATAAAGGTCCTGCGAACCTTTAA
CAGTTCCTCCATGCAGTTCCACCTGCAAGAAGAACTCATTGGCGGGATCT
CTATCGATACCCATGGTCATTCCGTCACGCAACCCGTCAAAGACGCTGCG
GTCGCTGCAGACGCTGTACTCTTCGCAGCAGTCGGGGGTCCCAAGTGGGA
TCATATCAGGCGCGGACTCGACGGGCCAGAGGGGGGTCTGTTACAGGTAC
GCAAAGCCATGGACATATACGCAAATTTGAGACCGTGTTCAGTGGATGTA
CCGAGTCGGGAAATTGCGAGGGACTTTTCACCTTTCAGGCAGGAGGTTAT
CGAGGGGGTCGATTTTGTAGTGGTGCGGGAGAATTGTGGAGGGGCCTATT
TTGGCAAAAAGGTTGAGGAAGAGAATTATGGTAAATTCCATTCTACCGTG
TAAGCCAGAAAAGGTGGCTAGCATGATGCTCTAACACGAGTGCAGCAATG
GATGAGTGGGGTTATTCCACCACCGAAATTCAACGCATTGCTCGTCTCGC
TGCAGAGCTTGCCCTGCGGCATGACCCGCCGTGGCCTGTGATTTCTCTTG
ACAAAGCCAATGTACTGGCCTCGTCGCGTCTGTGGCGTCGCGTTGTCGAG
AACACAATTTCAGTAGAGTATCCACAAGTCAAATTGGTCCACCAGCTCGC
AGATTCAGCATCATTGATCATGGCAACCGATCCACGAGTCCTCAACGGTG
TGATTCTGGCAGACAATACCTTCGGAGACATGTTATCAGACCAGGCGGGG
TCACTGATTGGAACATTAGGTGTCCTGCCTAGTGCCAGCTTGGATGGTCT
TCCTCATCCTGGCAAGCAGGAAAAGGTTCGCGGTCTATATGAACCAACGC
ATGGCTCTGCTCCGACGTATGTCTTTCTAGATGGCACGAATATACCATTG
CTGACATCTTGAAGAATAGCCGGTAAGAACATCGCGAATCCAACTGCGAT
GATCCTCTGTGTGAGCCTGATGTTCCGGTACTCTTTCAATATGGAGAACG
AAGCGCGCCAAATTGAGGATGCCGTGCGTGCCGTTTTGGATAGGGGACTT
CGCACTCCTGACCTTGGTGGAAATTCAAGCACTCAAGAGTTTGGAGACGC
CGTTGTTGCAGCACTGCAAGGGAAATATTAGAGAGGATGTGACATACATA
TAGTACCTGGAAGCATCATACGTGTTGACTTTCTATGATATGATGGTGAT
ATCTGGGACGGTATGTGAGTGGCCAAGTCAATATGGTTAGCAAAATGTTA
CTCTGTAGATGGGAGTCTCCATATTATGGCAAGAGAATCGTCTTGAG
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Coding sequence (CDS) from alignment at ch6:5049268..5050714-

>KJC3_009273-T1 ID=KJC3_009273-T1|Name=KJC3_009273-T1|organism=Aspergillus niger KJC3|type=CDS|length=3348bp|location=Sequence derived from alignment at ch6:5049268..5050714- (Aspergillus niger KJC3)
AATAGCCGGTAAGAACATCGCGAATCCAACTGCGATGATCCTCTGTGTGA
GCCTGATGTTCCGGTACTCTTTCAATATGGAGAACGAAGCGCGCCAAATT
GAGGATGCCGTGCGTGCCGTTTTGGATAGGGGACTTCGCACTCCTGACCT
TGGTGGAAATTCAAGCACTCAAGAGTTTGGAGACGCCGTTGTTGCAGCAC
TGCAAGGGAAATATTAGCAATGGATGAGTGGGGTTATTCCACCACCGAAA
TTCAACGCATTGCTCGTCTCGCTGCAGAGCTTGCCCTGCGGCATGACCCG
CCGTGGCCTGTGATTTCTCTTGACAAAGCCAATGTACTGGCCTCGTCGCG
TCTGTGGCGTCGCGTTGTCGAGAACACAATTTCAGTAGAGTATCCACAAG
TCAAATTGGTCCACCAGCTCGCAGATTCAGCATCATTGATCATGGCAACC
GATCCACGAGTCCTCAACGGTGTGATTCTGGCAGACAATACCTTCGGAGA
CATGTTATCAGACCAGGCGGGGTCACTGATTGGAACATTAGGTGTCCTGC
CTAGTGCCAGCTTGGATGGTCTTCCTCATCCTGGCAAGCAGGAAAAGGTT
CGCGGTCTATATGAACCAACGCATGGCTCTGCTCCGACATGTCTGGTACA
AGAGCCTATAACATCCTTGTCCTTCCCGGCGACGGCATCGGCCCGGAGGT
CATGGCCGAAGCCATAAAGGTCCTGCGAACCTTTAACAGTTCCTCCATGC
AGTTCCACCTGCAAGAAGAACTCATTGGCGGGATCTCTATCGATACCCAT
GGTCATTCCGTCACGCAACCCGTCAAAGACGCTGCGGTCGCTGCAGACGC
TGTACTCTTCGCAGCAGTCGGGGGTCCCAAGTGGGATCATATCAGGCGCG
GACTCGACGGGCCAGAGGGGGGTCTGTTACAGGTACGCAAAGCCATGGAC
ATATACGCAAATTTGAGACCGTGTTCAGTGGATGTACCGAGTCGGGAAAT
TGCGAGGGACTTTTCACCTTTCAGGCAGGAGGTTATCGAGGGGGTCGATT
TTGTAGTGGTGCGGGAGAATTGTGGAGGGGCCTATTTTGGCAAAAAGGTT
GAGGAAGAGAATTATGAATAGCCGGTAAGAACATCGCGAATCCAACTGCG
ATGATCCTCTGTGTGAGCCTGATGTTCCGGTACTCTTTCAATATGGAGAA
CGAAGCGCGCCAAATTGAGGATGCCGTGCGTGCCGTTTTGGATAGGGGAC
TTCGCACTCCTGACCTTGGTGGAAATTCAAGCACTCAAGAGTTTGGAGAC
GCCGTTGTTGCAGCACTGCAAGGGAAATATTAGCAATGGATGAGTGGGGT
TATTCCACCACCGAAATTCAACGCATTGCTCGTCTCGCTGCAGAGCTTGC
CCTGCGGCATGACCCGCCGTGGCCTGTGATTTCTCTTGACAAAGCCAATG
TACTGGCCTCGTCGCGTCTGTGGCGTCGCGTTGTCGAGAACACAATTTCA
GTAGAGTATCCACAAGTCAAATTGGTCCACCAGCTCGCAGATTCAGCATC
ATTGATCATGGCAACCGATCCACGAGTCCTCAACGGTGTGATTCTGGCAG
ACAATACCTTCGGAGACATGTTATCAGACCAGGCGGGGTCACTGATTGGA
ACATTAGGTGTCCTGCCTAGTGCCAGCTTGGATGGTCTTCCTCATCCTGG
CAAGCAGGAAAAGGTTCGCGGTCTATATGAACCAACGCATGGCTCTGCTC
CGACATGTCTGGTACAAGAGCCTATAACATCCTTGTCCTTCCCGGCGACG
GCATCGGCCCGGAGGTCATGGCCGAAGCCATAAAGGTCCTGCGAACCTTT
AACAGTTCCTCCATGCAGTTCCACCTGCAAGAAGAACTCATTGGCGGGAT
CTCTATCGATACCCATGGTCATTCCGTCACGCAACCCGTCAAAGACGCTG
CGGTCGCTGCAGACGCTGTACTCTTCGCAGCAGTCGGGGGTCCCAAGTGG
GATCATATCAGGCGCGGACTCGACGGGCCAGAGGGGGGTCTGTTACAGGT
ACGCAAAGCCATGGACATATACGCAAATTTGAGACCGTGTTCAGTGGATG
TACCGAGTCGGGAAATTGCGAGGGACTTTTCACCTTTCAGGCAGGAGGTT
ATCGAGGGGGTCGATTTTGTAGTGGTGCGGGAGAATTGTGGAGGGGCCTA
TTTTGGCAAAAAGGTTGAGGAAGAGAATTATGAATAGCCGGTAAGAACAT
CGCGAATCCAACTGCGATGATCCTCTGTGTGAGCCTGATGTTCCGGTACT
CTTTCAATATGGAGAACGAAGCGCGCCAAATTGAGGATGCCGTGCGTGCC
GTTTTGGATAGGGGACTTCGCACTCCTGACCTTGGTGGAAATTCAAGCAC
TCAAGAGTTTGGAGACGCCGTTGTTGCAGCACTGCAAGGGAAATATTAGC
AATGGATGAGTGGGGTTATTCCACCACCGAAATTCAACGCATTGCTCGTC
TCGCTGCAGAGCTTGCCCTGCGGCATGACCCGCCGTGGCCTGTGATTTCT
CTTGACAAAGCCAATGTACTGGCCTCGTCGCGTCTGTGGCGTCGCGTTGT
CGAGAACACAATTTCAGTAGAGTATCCACAAGTCAAATTGGTCCACCAGC
TCGCAGATTCAGCATCATTGATCATGGCAACCGATCCACGAGTCCTCAAC
GGTGTGATTCTGGCAGACAATACCTTCGGAGACATGTTATCAGACCAGGC
GGGGTCACTGATTGGAACATTAGGTGTCCTGCCTAGTGCCAGCTTGGATG
GTCTTCCTCATCCTGGCAAGCAGGAAAAGGTTCGCGGTCTATATGAACCA
ACGCATGGCTCTGCTCCGACATGTCTGGTACAAGAGCCTATAACATCCTT
GTCCTTCCCGGCGACGGCATCGGCCCGGAGGTCATGGCCGAAGCCATAAA
GGTCCTGCGAACCTTTAACAGTTCCTCCATGCAGTTCCACCTGCAAGAAG
AACTCATTGGCGGGATCTCTATCGATACCCATGGTCATTCCGTCACGCAA
CCCGTCAAAGACGCTGCGGTCGCTGCAGACGCTGTACTCTTCGCAGCAGT
CGGGGGTCCCAAGTGGGATCATATCAGGCGCGGACTCGACGGGCCAGAGG
GGGGTCTGTTACAGGTACGCAAAGCCATGGACATATACGCAAATTTGAGA
CCGTGTTCAGTGGATGTACCGAGTCGGGAAATTGCGAGGGACTTTTCACC
TTTCAGGCAGGAGGTTATCGAGGGGGTCGATTTTGTAGTGGTGCGGGAGA
ATTGTGGAGGGGCCTATTTTGGCAAAAAGGTTGAGGAAGAGAATTATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0051287NAD binding
GO:00038623-isopropylmalate dehydrogenase activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0009098leucine biosynthetic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LEU2BKJC3_009273Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009273-T1KJC3_009273-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009273-T1.cdsKJC3_009273-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009273-T1.utr3p1KJC3_009273-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009273-T1.exon3KJC3_009273-T1.exon3Aspergillus niger KJC3exon
KJC3_009273-T1.exon2KJC3_009273-T1.exon2Aspergillus niger KJC3exon
KJC3_009273-T1.exon1KJC3_009273-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009273-T1.utr5p1KJC3_009273-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019818
DBxrefInterPro:IPR004429
DBxrefInterPro:IPR024084
DBxrefPFAM:PF00180
Product3-isopropylmalate dehydrogenase B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:5049268..5050714 -
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