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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:17136..18790+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009287-T1 ID=KJC3_009287-T1|Name=KJC3_009287-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1655bp|location=Sequence derived from alignment at ch7:17136..18790+ (Aspergillus niger KJC3)
ATGCCCGAGGCTAATACCGCTCTTGTGCAAAATGAGTCGAGCTCTGCCGC
ATTGGCGCATGACGGCACAATCGAGCAAGTGCAACTGCAGTTCCCGCAGG
CTGGCCGCTACAAACAGATTGCGGCCACCATTCAGCTCTCCACAGTCACG
CTGACAGCCAGCGTGCTAAATGGCCTGATCATAGTTGGTCTTCCGACCAT
AACCAAGGATCTGCAGCTTCCAGCTTCCTTGTCCCTCTGGCCGTCATCGG
TCGCGAGTCTTGCTACTGCCACGACACTTCTTTTAGCTGGTTCCATCGCT
GATACTATCGGTCCACGGTGGGTCGAAATTGTCGGATCGTTTGCTAGCGG
CGCATTGATGGTCGGCCAAGGACTGGCGCGGAATGGCGAGGAGTTAGTGA
CTCTTAGAGCTTTGCAAGGAGTTGGACTAGCTATGCATCTAGCCTCCTCG
ATATCTCTTCTGGGACAACTGCTGCCTCCGGGGAAGAGCCGTAATCTAGC
CTTCTCGTGCCTCGGGCTCAGCTTGCCCCTTGGCTTTTCGCTCGGGCTGG
TTGTTGGAGGACTCATGGTTGATAGGATTGGCTGGCGACTAGGCTGGTAC
ATATCCGGAGGCATGACTCTCTTCGTGTCTGTCATAGGCCTCTGGGCGTT
ACCATCAAATACTACCACTAGAGATGTGCACTATTTTCGCGCACTTGCAA
CAAGGGTGGACTGGGTGGGAGCTGCTCTCGGCTCTGCATTCTTGGCGCTA
CTCTGTTATCTCCTCGCGTAAGATACGGGCCAGCCCTAATTCTTCTTTCA
CCACTGACCAGGCTGACTATAGGATACTGAGCGTAACGCCATCGCGCATC
AAGTCCGCCCAATGTATTATAATTGTATGTCTGATTGCTCTTGCCCTACC
GGCATTCATTGCCTGGTCCCATTACCAGGTCAAAGTGGGAAGACCGGCCC
TTATTCCCAATATCGTGTGGAAGAAGAGATCATTTTCCAGTGTATGCGCT
CTAGTGGCGCTATCAAACGGAGTGCTGAATGCCATGGAGCTTTTCACCAG
TCTGTAGTAAGCGATCATCATGCCTATCAACCCGTGTTTGTGCTTGTTTT
TGACCCCGACACAGTTTCCAGGAGATTCAAGGTCTGTCAGCCATACAAGC
TTCCATTCGAATCCTGCCTAGTCTTGTCTCCGGTATCTTCATGAACCTGA
TAGTGGGCCTCTTTGTGCACCGAGTGCCCGCATTCTGGATTGTTACGGCG
GCCACAATTGTTTGTGCTGTGTCGCCTCTGCTTATGGCTCTCGTTCAGCC
TTCTACACCATACTGGGGCAATGCTTTCGTCGCCCAAGTCCTGCAGCCTG
TCAGCTTCGGTGCGCTCTACACGGTCGGACTCATAATAGTCACGGATTGT
TTTGCCGAAGACATGCAAGCCTTGGCTGGCGCCGTGTTTAACACCGCCTC
ACAGTTTGGTAACGCTATTGGATTAGCTGTGCTTCAGGTGATTTCGAATG
TTGTCTCCAAACATTCGGGTGACCAGGAAAATCTAGCCTTGATGGACGGG
TATCGCGCCAGCTTCTGGACAATGTTCGGATCGATGATTCTCTGCACTAT
TCTTGGTTTTTGGGGCCTGTACAAGGCTGGCAAGGTCGGTCTGAAACGGG
ATTAA back to topCoding sequence (CDS) from alignment at ch7:17136..18790+ >KJC3_009287-T1 ID=KJC3_009287-T1|Name=KJC3_009287-T1|organism=Aspergillus niger KJC3|type=CDS|length=4626bp|location=Sequence derived from alignment at ch7:17136..18790+ (Aspergillus niger KJC3)
ATGCCCGAGGCTAATACCGCTCTTGTGCAAAATGAGTCGAGCTCTGCCGC
ATTGGCGCATGACGGCACAATCGAGCAAGTGCAACTGCAGTTCCCGCAGG
CTGGCCGCTACAAACAGATTGCGGCCACCATTCAGCTCTCCACAGTCACG
CTGACAGCCAGCGTGCTAAATGGCCTGATCATAGTTGGTCTTCCGACCAT
AACCAAGGATCTGCAGCTTCCAGCTTCCTTGTCCCTCTGGCCGTCATCGG
TCGCGAGTCTTGCTACTGCCACGACACTTCTTTTAGCTGGTTCCATCGCT
GATACTATCGGTCCACGGTGGGTCGAAATTGTCGGATCGTTTGCTAGCGG
CGCATTGATGGTCGGCCAAGGACTGGCGCGGAATGGCGAGGAGTTAGTGA
CTCTTAGAGCTTTGCAAGGAGTTGGACTAGCTATGCATCTAGCCTCCTCG
ATATCTCTTCTGGGACAACTGCTGCCTCCGGGGAAGAGCCGTAATCTAGC
CTTCTCGTGCCTCGGGCTCAGCTTGCCCCTTGGCTTTTCGCTCGGGCTGG
TTGTTGGAGGACTCATGGTTGATAGGATTGGCTGGCGACTAGGCTGGTAC
ATATCCGGAGGCATGACTCTCTTCGTGTCTGTCATAGGCCTCTGGGCGTT
ACCATCAAATACTACCACTAGAGATGTGCACTATTTTCGCGCACTTGCAA
CAAGGGTGGACTGGGTGGGAGCTGCTCTCGGCTCTGCATTCTTGGCGCTA
CTCTGTTATCTCCTCGCGATACTGAGCGTAACGCCATCGCGCATCAAGTC
CGCCCAATGTATTATAATTGTATGTCTGATTGCTCTTGCCCTACCGGCAT
TCATTGCCTGGTCCCATTACCAGGTCAAAGTGGGAAGACCGGCCCTTATT
CCCAATATCGTGTGGAAGAAGAGATCATTTTCCAGTGTATGCGCTCTAGT
GGCGCTATCAAACGGAGTGCTGAATGCCATGGAGCTTTTCACCAGTCTGT
ATTTCCAGGAGATTCAAGGTCTGTCAGCCATACAAGCTTCCATTCGAATC
CTGCCTAGTCTTGTCTCCGGTATCTTCATGAACCTGATAGTGGGCCTCTT
TGTGCACCGAGTGCCCGCATTCTGGATTGTTACGGCGGCCACAATTGTTT
GTGCTGTGTCGCCTCTGCTTATGGCTCTCGTTCAGCCTTCTACACCATAC
TGGGGCAATGCTTTCGTCGCCCAAGTCCTGCAGCCTGTCAGCTTCGGTGC
GCTCTACACGGTCGGACTCATAATAGTCACGGATTGTTTTGCCGAAGACA
TGCAAGCCTTGGCTGGCGCCGTGTTTAACACCGCCTCACAGTTTGGTAAC
GCTATTGGATTAGCTGTGCTTCAGGTGATTTCGAATGTTGTCTCCAAACA
TTCGGGTGACCAGGAAAATCTAGCCTTGATGGACGGGTATCGCGCCAGCT
TCTGGACAATGTTCGGATCGATGATTCTCTGCACTATTCTTGGTTTTTGG
GGCCTGTACAAGGCTGGCAAGGTCGGTCTGAAACGGGATTAAATGCCCGA
GGCTAATACCGCTCTTGTGCAAAATGAGTCGAGCTCTGCCGCATTGGCGC
ATGACGGCACAATCGAGCAAGTGCAACTGCAGTTCCCGCAGGCTGGCCGC
TACAAACAGATTGCGGCCACCATTCAGCTCTCCACAGTCACGCTGACAGC
CAGCGTGCTAAATGGCCTGATCATAGTTGGTCTTCCGACCATAACCAAGG
ATCTGCAGCTTCCAGCTTCCTTGTCCCTCTGGCCGTCATCGGTCGCGAGT
CTTGCTACTGCCACGACACTTCTTTTAGCTGGTTCCATCGCTGATACTAT
CGGTCCACGGTGGGTCGAAATTGTCGGATCGTTTGCTAGCGGCGCATTGA
TGGTCGGCCAAGGACTGGCGCGGAATGGCGAGGAGTTAGTGACTCTTAGA
GCTTTGCAAGGAGTTGGACTAGCTATGCATCTAGCCTCCTCGATATCTCT
TCTGGGACAACTGCTGCCTCCGGGGAAGAGCCGTAATCTAGCCTTCTCGT
GCCTCGGGCTCAGCTTGCCCCTTGGCTTTTCGCTCGGGCTGGTTGTTGGA
GGACTCATGGTTGATAGGATTGGCTGGCGACTAGGCTGGTACATATCCGG
AGGCATGACTCTCTTCGTGTCTGTCATAGGCCTCTGGGCGTTACCATCAA
ATACTACCACTAGAGATGTGCACTATTTTCGCGCACTTGCAACAAGGGTG
GACTGGGTGGGAGCTGCTCTCGGCTCTGCATTCTTGGCGCTACTCTGTTA
TCTCCTCGCGATACTGAGCGTAACGCCATCGCGCATCAAGTCCGCCCAAT
GTATTATAATTGTATGTCTGATTGCTCTTGCCCTACCGGCATTCATTGCC
TGGTCCCATTACCAGGTCAAAGTGGGAAGACCGGCCCTTATTCCCAATAT
CGTGTGGAAGAAGAGATCATTTTCCAGTGTATGCGCTCTAGTGGCGCTAT
CAAACGGAGTGCTGAATGCCATGGAGCTTTTCACCAGTCTGTATTTCCAG
GAGATTCAAGGTCTGTCAGCCATACAAGCTTCCATTCGAATCCTGCCTAG
TCTTGTCTCCGGTATCTTCATGAACCTGATAGTGGGCCTCTTTGTGCACC
GAGTGCCCGCATTCTGGATTGTTACGGCGGCCACAATTGTTTGTGCTGTG
TCGCCTCTGCTTATGGCTCTCGTTCAGCCTTCTACACCATACTGGGGCAA
TGCTTTCGTCGCCCAAGTCCTGCAGCCTGTCAGCTTCGGTGCGCTCTACA
CGGTCGGACTCATAATAGTCACGGATTGTTTTGCCGAAGACATGCAAGCC
TTGGCTGGCGCCGTGTTTAACACCGCCTCACAGTTTGGTAACGCTATTGG
ATTAGCTGTGCTTCAGGTGATTTCGAATGTTGTCTCCAAACATTCGGGTG
ACCAGGAAAATCTAGCCTTGATGGACGGGTATCGCGCCAGCTTCTGGACA
ATGTTCGGATCGATGATTCTCTGCACTATTCTTGGTTTTTGGGGCCTGTA
CAAGGCTGGCAAGGTCGGTCTGAAACGGGATTAAATGCCCGAGGCTAATA
CCGCTCTTGTGCAAAATGAGTCGAGCTCTGCCGCATTGGCGCATGACGGC
ACAATCGAGCAAGTGCAACTGCAGTTCCCGCAGGCTGGCCGCTACAAACA
GATTGCGGCCACCATTCAGCTCTCCACAGTCACGCTGACAGCCAGCGTGC
TAAATGGCCTGATCATAGTTGGTCTTCCGACCATAACCAAGGATCTGCAG
CTTCCAGCTTCCTTGTCCCTCTGGCCGTCATCGGTCGCGAGTCTTGCTAC
TGCCACGACACTTCTTTTAGCTGGTTCCATCGCTGATACTATCGGTCCAC
GGTGGGTCGAAATTGTCGGATCGTTTGCTAGCGGCGCATTGATGGTCGGC
CAAGGACTGGCGCGGAATGGCGAGGAGTTAGTGACTCTTAGAGCTTTGCA
AGGAGTTGGACTAGCTATGCATCTAGCCTCCTCGATATCTCTTCTGGGAC
AACTGCTGCCTCCGGGGAAGAGCCGTAATCTAGCCTTCTCGTGCCTCGGG
CTCAGCTTGCCCCTTGGCTTTTCGCTCGGGCTGGTTGTTGGAGGACTCAT
GGTTGATAGGATTGGCTGGCGACTAGGCTGGTACATATCCGGAGGCATGA
CTCTCTTCGTGTCTGTCATAGGCCTCTGGGCGTTACCATCAAATACTACC
ACTAGAGATGTGCACTATTTTCGCGCACTTGCAACAAGGGTGGACTGGGT
GGGAGCTGCTCTCGGCTCTGCATTCTTGGCGCTACTCTGTTATCTCCTCG
CGATACTGAGCGTAACGCCATCGCGCATCAAGTCCGCCCAATGTATTATA
ATTGTATGTCTGATTGCTCTTGCCCTACCGGCATTCATTGCCTGGTCCCA
TTACCAGGTCAAAGTGGGAAGACCGGCCCTTATTCCCAATATCGTGTGGA
AGAAGAGATCATTTTCCAGTGTATGCGCTCTAGTGGCGCTATCAAACGGA
GTGCTGAATGCCATGGAGCTTTTCACCAGTCTGTATTTCCAGGAGATTCA
AGGTCTGTCAGCCATACAAGCTTCCATTCGAATCCTGCCTAGTCTTGTCT
CCGGTATCTTCATGAACCTGATAGTGGGCCTCTTTGTGCACCGAGTGCCC
GCATTCTGGATTGTTACGGCGGCCACAATTGTTTGTGCTGTGTCGCCTCT
GCTTATGGCTCTCGTTCAGCCTTCTACACCATACTGGGGCAATGCTTTCG
TCGCCCAAGTCCTGCAGCCTGTCAGCTTCGGTGCGCTCTACACGGTCGGA
CTCATAATAGTCACGGATTGTTTTGCCGAAGACATGCAAGCCTTGGCTGG
CGCCGTGTTTAACACCGCCTCACAGTTTGGTAACGCTATTGGATTAGCTG
TGCTTCAGGTGATTTCGAATGTTGTCTCCAAACATTCGGGTGACCAGGAA
AATCTAGCCTTGATGGACGGGTATCGCGCCAGCTTCTGGACAATGTTCGG
ATCGATGATTCTCTGCACTATTCTTGGTTTTTGGGGCCTGTACAAGGCTG
GCAAGGTCGGTCTGAAACGGGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:17136..18790 + |
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