|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:32254..34115+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009291-T3 ID=KJC3_009291-T3|Name=KJC3_009291-T3|organism=Aspergillus niger KJC3|type=mRNA|length=1862bp|location=Sequence derived from alignment at ch7:32254..34115+ (Aspergillus niger KJC3)
CTTTAGCTTTAGGTCCTAATTATAACCGGGGACCATCCGGAGCTCCCGAA
TCTGTGTACAACTCAATTGGCCAAGTCACATAAGTAGGCCGGTTCGTCCA
GCTGCAAAAAATCAGGCATCATGCAAAAACTTATAATAACTTATCTATCC
AAGATGACGAAACCCCAGGATGGGAATCAGCTTGAACAGCGCTCAACACG
GACTACTCTTCAGGAGACGAGCAGCGACAACACTGTTGATGTCCGGCCTC
CCAATGGCGGATACGGGTGGATTTGTGTGGTCTGTATCTGTTTGATCAAT
GCCCATACTTGGGGAATCAATGGCGTGAGTCTACACACTCTTCTATACTC
GAGTACTTAGACTGATTTGAATTTGTTTCAATCAGTCCTACGGCGTGTTT
CTGGCACATTACATCTCTGCTGATGTGTTTCCCGGAACATCTTCTCTAAT
TTATGCACTGATTGGAGGCTTAACAGTGTCGATGTGCCTTGTTATCTCTC
CCGTGGGTGTTCTAACCACTCGTCTCTGGGGAACCCAGACGACACTTCTA
ATCGGCGTTTTTTTTCAAACCGCGGGCCTTGTGGCGGCGTCCTTCAGTCA
TAAAATCTGGCAGTTGGTTCTCAGTCAGGGCCTATGCTTTGGATGGGGTA
TGGGACTGATGTTTGTGGCTTCTTTCGGGATTCCCGCGCAGTGGTTTACC
ACCAAGCGCAGTCTTGCCAGTGGATTTGCGACCTGTGGTAGTGCCTTAGG
GGGCCTCATATACAGCCTAGGCGCAAATGCTATGATCGAAAACATCAGTC
TGCCCTGGGCGTTTCGTATCCTCGCTATCGTTTCCTTCGTCGTCAACACC
GGAAGCTCCCTACTACTTCGTGACCGCAATACGCAGACCAAAAATCGGCC
CGCTATATTTGAAATTAGTCTCTTAAAGAACTACAATTTCCTTTTAGTTC
TCCTCTGGGCTGCTTTCAGCTTGATAGCTTATACAATTGTGCTGTTTTCG
ATCCCCGACTACGGAGAGAGCGAAGGTCTTTCAGCGGACCAAGGGGCGCT
GCTAGGGGCACTGGTCAACCTTGGGCAGGTGGTGGGGCGGCCGGGAGTTG
GCTTTTTGAGTGATCGATTTGGCCGTCTGAATGTGTCCTCAGTGATGACC
TTTCTCTCAGGCCTCCTTTGTTTCATCTTCTGGATATTTGCCAGGGAGTA
TGTGTCTATCCTAGCCTTTTCGCTGGTCATTGGTTTGTTCGTCGGGACCT
TCTGGGCCTCTTTGGCTCCCATTGTTGCTGAGGTGCTAGGACTGCATCAA
ACAATCAATGGGCTGAACATTTGCTGGATGGTTCTGGTAAGTCCAGTTAC
TGGTAAGTTCTAATCCCTTCCTTGATGACCTCTTACCTCTTCTTGTATGC
TCTAATCATGGAAACAGTTTGCGAGATCATTGGCCTAGTTCTGCGAAAGC
CCGGCGGGAATGAATATTTACATGTCCAGATTTTCACTGGCGCACTGTAT
GTGGCTGCCTCGCTTTGTTTGCTCCTCCTGCGTAGGCAGATGATGCGAAA
CCGTGACCTGAGCAAACCCGGCGCCGCTGAACTTATATTTGGATTCACCA
AATTGTGAGACAAAAGGCATGGCTTTCTGCGTTTTCCCACATGTATACCG
ATAACTCTCTTCATCGGGTCGGACAAACAGAAAATGGAGGGAAGGGAAGC
GAAGATTTTGAAGCCGGGTGCTATAGGGTACGCGCAAAACATATTAAGGC
ACTTGGGCCACTACAGGCCTTGACGAAGGCACTAAGTTTGTCCGAAATTT
AGTGGCTATAGCAGCAGATAGTCTATTCCATACGGCGGGTTAACTCTGTA
TATTTTCCAGGA back to topCoding sequence (CDS) from alignment at ch7:32254..34115+ >KJC3_009291-T3 ID=KJC3_009291-T3|Name=KJC3_009291-T3|organism=Aspergillus niger KJC3|type=CDS|length=2124bp|location=Sequence derived from alignment at ch7:32254..34115+ (Aspergillus niger KJC3)
ATGTGCCTTGTTATCTCTCCCGTGGGTGTTCTAACCACTCGTCTCTGGGG
AACCCAGACGACACTTCTAATCGGCGTTTTTTTTCAAACCGCGGGCCTTG
TGGCGGCGTCCTTCAGTCATAAAATCTGGCAGTTGGTTCTCAGTCAGGGC
CTATGCTTTGGATGGGGTATGGGACTGATGTTTGTGGCTTCTTTCGGGAT
TCCCGCGCAGTGGTTTACCACCAAGCGCAGTCTTGCCAGTGGATTTGCGA
CCTGTGGTAGTGCCTTAGGGGGCCTCATATACAGCCTAGGCGCAAATGCT
ATGATCGAAAACATCAGTCTGCCCTGGGCGTTTCGTATCCTCGCTATCGT
TTCCTTCGTCGTCAACACCGGAAGCTCCCTACTACTTCGTGACCGCAATA
CGCAGACCAAAAATCGGCCCGCTATATTTGAAATTAGTCTCTTAAAGAAC
TACAATTTCCTTTTAGTTCTCCTCTGGGCTGCTTTCAGCTTGATAGCTTA
TACAATTGTGCTGTTTTCGATCCCCGACTACGGAGAGAGCGAAGGTCTTT
CAGCGGACCAAGGGGCGCTGCTAGGGGCACTGGTCAACCTTGGGCAGGTG
GTGGGGCGGCCGGGAGTTGGCTTTTTGAGTGATCGATTTGGCCGTCTGAA
TGTGTCCTCAGTGATGACCTTTCTCTCAGGCCTCCTTTGTTTCATCTTCT
GGATATTTGCCAGGGAGTATGTGTCTATCCTAGCCTTTTCGCTGGTCATT
GGTTTGTTCGTCGGGACCTTCTGGGCCTCTTTGGCTCCCATTGTTGCTGA
GGTGCTAGGACTGCATCAAACAATCAATGGGCTGAACATTTGCTGGATGG
TTCTGGTAAGTCCAGTTACTGTTTGCGAGATCATTGGCCTAGTTCTGCGA
AAGCCCGGCGGGAATGAATATTTACATGTCCAGATTTTCACTGGCGCACT
GTATGTGGCTGCCTCGCTTTGTTTGCTCCTCCTGCGTAGGCAGATGATGC
GAAACCGTGACCTGAGCAAACCCGGCGCCGCTGAACTTATATTTGGATTC
ACCAAATTGTGAATGTGCCTTGTTATCTCTCCCGTGGGTGTTCTAACCAC
TCGTCTCTGGGGAACCCAGACGACACTTCTAATCGGCGTTTTTTTTCAAA
CCGCGGGCCTTGTGGCGGCGTCCTTCAGTCATAAAATCTGGCAGTTGGTT
CTCAGTCAGGGCCTATGCTTTGGATGGGGTATGGGACTGATGTTTGTGGC
TTCTTTCGGGATTCCCGCGCAGTGGTTTACCACCAAGCGCAGTCTTGCCA
GTGGATTTGCGACCTGTGGTAGTGCCTTAGGGGGCCTCATATACAGCCTA
GGCGCAAATGCTATGATCGAAAACATCAGTCTGCCCTGGGCGTTTCGTAT
CCTCGCTATCGTTTCCTTCGTCGTCAACACCGGAAGCTCCCTACTACTTC
GTGACCGCAATACGCAGACCAAAAATCGGCCCGCTATATTTGAAATTAGT
CTCTTAAAGAACTACAATTTCCTTTTAGTTCTCCTCTGGGCTGCTTTCAG
CTTGATAGCTTATACAATTGTGCTGTTTTCGATCCCCGACTACGGAGAGA
GCGAAGGTCTTTCAGCGGACCAAGGGGCGCTGCTAGGGGCACTGGTCAAC
CTTGGGCAGGTGGTGGGGCGGCCGGGAGTTGGCTTTTTGAGTGATCGATT
TGGCCGTCTGAATGTGTCCTCAGTGATGACCTTTCTCTCAGGCCTCCTTT
GTTTCATCTTCTGGATATTTGCCAGGGAGTATGTGTCTATCCTAGCCTTT
TCGCTGGTCATTGGTTTGTTCGTCGGGACCTTCTGGGCCTCTTTGGCTCC
CATTGTTGCTGAGGTGCTAGGACTGCATCAAACAATCAATGGGCTGAACA
TTTGCTGGATGGTTCTGGTAAGTCCAGTTACTGTTTGCGAGATCATTGGC
CTAGTTCTGCGAAAGCCCGGCGGGAATGAATATTTACATGTCCAGATTTT
CACTGGCGCACTGTATGTGGCTGCCTCGCTTTGTTTGCTCCTCCTGCGTA
GGCAGATGATGCGAAACCGTGACCTGAGCAAACCCGGCGCCGCTGAACTT
ATATTTGGATTCACCAAATTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009291-T3.utr3p1 | KJC3_009291-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:32254..34115 + |
|
