|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:35864..38014- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009292-T1 ID=KJC3_009292-T1|Name=KJC3_009292-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2151bp|location=Sequence derived from alignment at ch7:35864..38014- (Aspergillus niger KJC3) CCCAAGGCTTCGGTTCTCGCTAGGTTATTTCGGGCGGATCCGGCGTGTCG
TTTCTCAGGTTGACGAACGTCAGGGATTGAGTCTCACGATCCGGTCATGA
CATAGGCCGCGTTATAAATAGTCCAACCACTACCGGTTGCGCTACTGTTT
GTGCTAAGGAATTGAAAGCATAACTGATAAACTCCTAGTTTCATTCAGTG
CGTTTCAGCGTGACCAAGAATATGGGGTATGCAACGTTTTGGAGGCGGTT
ATCCCCACGCCAACTCAATGTTATGATTCAGACCCTTTCTCTCGTTTGCA
TATTCTTCGAGGGATATGATCAAGGTGTCATGGGAGGCGTCAACAGCTCT
CCCAGATACGTTACAGAGGTTGGAATTGGCGAACCAGATGGCACAGTAAC
CGACACCACCCATCAAGGAGGCATTGTCAGCATCTACTACCTTGGATGCA
TTTTTGGTTGTTTCGGAGGTGGCTGGCTGGCTGATCGGTTAGGCCGCATC
AATGGCCTCCTGGTCGGTTCTTTGCTTGCGCTTGTGGGAGGTGCTTTGCA
AGCTGCAGCTCAGAGTTCAAATTTCATGCTCGTCGCCAGGGTGGTGACAG
GCGTTGGCACTGGTGGTATGCCCACCTTCCGTACTTAGACCCCCCTGGGA
GAAGCTGATCTGGCTAGCATTGACTGGCATAGCACCAGTACTGGTATCAG
AGACGTCAACAGCTGATCACCGCGGAGCCTTCCTTGGATATGTTTTCATT
GCAAACTGTAAGTGCCAGACGTTGGATGAAGCTCCTCCGGAATATAAACT
GACCGGTTTATCCTGAAGATCTAGGAATCTCCGTCGCATACTGGCTGTCA
TTTGGTCTTGCTTTCATCAATAATGGTTATTCCGATATTCGCTGGCGCTT
TTTGTTGGCGTTTCAGTGCATTCCAGCACTCATCTTGCTGTTGTTTATCA
AGATGCTTCCAGATAGTCCACGGTTCCTTGCATCTGTCGGTCGTTATGAC
GAAGCTCAGCAGGTTCTTAACAAGATCCGTTGCCATAGAGCCAGCCAATC
AGAGATTGACCTCGAATACAAAGAAATCATTGCGACTGTGCAAGAAGGCA
AACCAAGCTCGCCCCTTCAGTTCGCCAAAATATTGATCGGCAAAGGAGGA
AGCCCTGGCTCCAATCTGGGTCGACGCGCCTGGCTGTGTATATGGCTCCA
GATCATGGCGTCCTGGACTGGTATTACGGTAAGTGGCGTTAAAGTATGAA
GTCGCATGGATAGCCTGGCTGATATGTATCAACCTTGACAGGCTGTTACT
GCATATTCTCCTGTTCTGCTTCGACAGGCGGGCTACAGCGAGCTGACCCA
AAATGGCCTTGCTGGAGGATTAAATACAATTGGTATTTTCGGCACTATAA
TCAGTACGCAAATCGTAGATCGGATTGGAAGGCGAAAATGTTTGATGCTT
GGCTCTACTATCTTGTTTGTCGTCGAGCTTGTGGTAAGTTCCACGCGCCC
CTATAACGTCATTAACTCCGATTCTAAGATGTATCCTCTCCAGGCGGGAT
CTGTCTACGAGGCGTCCCTTCATCAGCCGGATAAAGCCAGCCAATTTGCA
CCTGCTGCTGTTGCGATGCTGTTCCTGTTCAACTTGGGATATGCCGCGAC
CTGGGGAACCGTCGCTTTCTTGATACCAACCGAGATCTTTCCCTCCGACC
TCCGGGCTCAAGGTAACGGCTTTGGCATCACCGGCTGGGCCGTTGGTGTT
GGGATGACCACACTGGTGAACCCAATTATGTTTGCAAGTATTGGAAGTCG
CAGTTACTTCCTCCTCGCTGGATTAAATCTTCTGTGGGTTCCAACTATTT
ACCTTTTCTACCCAGAGACCCGCAACCGGACTCTAGAGTCTATTGACTAC
CTGTTCTCGACCTCGGGTCCATTTTATTGGGATATGGAGAGGGCCTTCAG
GCTGTGCATGGATGGGAAGGTGGAGGAGCATGTCGATGAGCAGGCCATAA
AGGGTGCGGGCCAGCATGAAACCCAGCAGGAGTTTCATGAGAACATCCAG
AATAGAGTGTAAAGTAAGGGTATACAAACACATGTGAACGGTTGCCAACT
AACGTACAGCGGGCAATAGCGGCCATCAGGCAATAATAAGTTTTGGTTGT
C back to topCoding sequence (CDS) from alignment at ch7:35864..38014- >KJC3_009292-T1 ID=KJC3_009292-T1|Name=KJC3_009292-T1|organism=Aspergillus niger KJC3|type=CDS|length=8025bp|location=Sequence derived from alignment at ch7:35864..38014- (Aspergillus niger KJC3) GCGGGATCTGTCTACGAGGCGTCCCTTCATCAGCCGGATAAAGCCAGCCA ATTTGCACCTGCTGCTGTTGCGATGCTGTTCCTGTTCAACTTGGGATATG CCGCGACCTGGGGAACCGTCGCTTTCTTGATACCAACCGAGATCTTTCCC TCCGACCTCCGGGCTCAAGGTAACGGCTTTGGCATCACCGGCTGGGCCGT TGGTGTTGGGATGACCACACTGGTGAACCCAATTATGTTTGCAAGTATTG GAAGTCGCAGTTACTTCCTCCTCGCTGGATTAAATCTTCTGTGGGTTCCA ACTATTTACCTTTTCTACCCAGAGACCCGCAACCGGACTCTAGAGTCTAT TGACTACCTGTTCTCGACCTCGGGTCCATTTTATTGGGATATGGAGAGGG CCTTCAGGCTGTGCATGGATGGGAAGGTGGAGGAGCATGTCGATGAGCAG GCCATAAAGGGTGCGGGCCAGCATGAAACCCAGCAGGAGTTTCATGAGAA CATCCAGAATAGAGTGTAAGCTGTTACTGCATATTCTCCTGTTCTGCTTC GACAGGCGGGCTACAGCGAGCTGACCCAAAATGGCCTTGCTGGAGGATTA AATACAATTGGTATTTTCGGCACTATAATCAGTACGCAAATCGTAGATCG GATTGGAAGGCGAAAATGTTTGATGCTTGGCTCTACTATCTTGTTTGTCG TCGAGCTTGTGATCTAGGAATCTCCGTCGCATACTGGCTGTCATTTGGTC TTGCTTTCATCAATAATGGTTATTCCGATATTCGCTGGCGCTTTTTGTTG GCGTTTCAGTGCATTCCAGCACTCATCTTGCTGTTGTTTATCAAGATGCT TCCAGATAGTCCACGGTTCCTTGCATCTGTCGGTCGTTATGACGAAGCTC AGCAGGTTCTTAACAAGATCCGTTGCCATAGAGCCAGCCAATCAGAGATT GACCTCGAATACAAAGAAATCATTGCGACTGTGCAAGAAGGCAAACCAAG CTCGCCCCTTCAGTTCGCCAAAATATTGATCGGCAAAGGAGGAAGCCCTG GCTCCAATCTGGGTCGACGCGCCTGGCTGTGTATATGGCTCCAGATCATG GCGTCCTGGACTGGTATTACGCATTGACTGGCATAGCACCAGTACTGGTA TCAGAGACGTCAACAGCTGATCACCGCGGAGCCTTCCTTGGATATGTTTT CATTGCAAACTATGGGGTATGCAACGTTTTGGAGGCGGTTATCCCCACGC CAACTCAATGTTATGATTCAGACCCTTTCTCTCGTTTGCATATTCTTCGA GGGATATGATCAAGGTGTCATGGGAGGCGTCAACAGCTCTCCCAGATACG TTACAGAGGTTGGAATTGGCGAACCAGATGGCACAGTAACCGACACCACC CATCAAGGAGGCATTGTCAGCATCTACTACCTTGGATGCATTTTTGGTTG TTTCGGAGGTGGCTGGCTGGCTGATCGGTTAGGCCGCATCAATGGCCTCC TGGTCGGTTCTTTGCTTGCGCTTGTGGGAGGTGCTTTGCAAGCTGCAGCT CAGAGTTCAAATTTCATGCTCGTCGCCAGGGTGGTGACAGGCGTTGGCAC TGGTGGCGGGATCTGTCTACGAGGCGTCCCTTCATCAGCCGGATAAAGCC AGCCAATTTGCACCTGCTGCTGTTGCGATGCTGTTCCTGTTCAACTTGGG ATATGCCGCGACCTGGGGAACCGTCGCTTTCTTGATACCAACCGAGATCT TTCCCTCCGACCTCCGGGCTCAAGGTAACGGCTTTGGCATCACCGGCTGG GCCGTTGGTGTTGGGATGACCACACTGGTGAACCCAATTATGTTTGCAAG TATTGGAAGTCGCAGTTACTTCCTCCTCGCTGGATTAAATCTTCTGTGGG TTCCAACTATTTACCTTTTCTACCCAGAGACCCGCAACCGGACTCTAGAG TCTATTGACTACCTGTTCTCGACCTCGGGTCCATTTTATTGGGATATGGA GAGGGCCTTCAGGCTGTGCATGGATGGGAAGGTGGAGGAGCATGTCGATG AGCAGGCCATAAAGGGTGCGGGCCAGCATGAAACCCAGCAGGAGTTTCAT GAGAACATCCAGAATAGAGTGTAAGCTGTTACTGCATATTCTCCTGTTCT GCTTCGACAGGCGGGCTACAGCGAGCTGACCCAAAATGGCCTTGCTGGAG GATTAAATACAATTGGTATTTTCGGCACTATAATCAGTACGCAAATCGTA GATCGGATTGGAAGGCGAAAATGTTTGATGCTTGGCTCTACTATCTTGTT TGTCGTCGAGCTTGTGATCTAGGAATCTCCGTCGCATACTGGCTGTCATT TGGTCTTGCTTTCATCAATAATGGTTATTCCGATATTCGCTGGCGCTTTT TGTTGGCGTTTCAGTGCATTCCAGCACTCATCTTGCTGTTGTTTATCAAG ATGCTTCCAGATAGTCCACGGTTCCTTGCATCTGTCGGTCGTTATGACGA AGCTCAGCAGGTTCTTAACAAGATCCGTTGCCATAGAGCCAGCCAATCAG AGATTGACCTCGAATACAAAGAAATCATTGCGACTGTGCAAGAAGGCAAA CCAAGCTCGCCCCTTCAGTTCGCCAAAATATTGATCGGCAAAGGAGGAAG CCCTGGCTCCAATCTGGGTCGACGCGCCTGGCTGTGTATATGGCTCCAGA TCATGGCGTCCTGGACTGGTATTACGCATTGACTGGCATAGCACCAGTAC TGGTATCAGAGACGTCAACAGCTGATCACCGCGGAGCCTTCCTTGGATAT GTTTTCATTGCAAACTATGGGGTATGCAACGTTTTGGAGGCGGTTATCCC CACGCCAACTCAATGTTATGATTCAGACCCTTTCTCTCGTTTGCATATTC TTCGAGGGATATGATCAAGGTGTCATGGGAGGCGTCAACAGCTCTCCCAG ATACGTTACAGAGGTTGGAATTGGCGAACCAGATGGCACAGTAACCGACA CCACCCATCAAGGAGGCATTGTCAGCATCTACTACCTTGGATGCATTTTT GGTTGTTTCGGAGGTGGCTGGCTGGCTGATCGGTTAGGCCGCATCAATGG CCTCCTGGTCGGTTCTTTGCTTGCGCTTGTGGGAGGTGCTTTGCAAGCTG CAGCTCAGAGTTCAAATTTCATGCTCGTCGCCAGGGTGGTGACAGGCGTT GGCACTGGTGGCGGGATCTGTCTACGAGGCGTCCCTTCATCAGCCGGATA AAGCCAGCCAATTTGCACCTGCTGCTGTTGCGATGCTGTTCCTGTTCAAC TTGGGATATGCCGCGACCTGGGGAACCGTCGCTTTCTTGATACCAACCGA GATCTTTCCCTCCGACCTCCGGGCTCAAGGTAACGGCTTTGGCATCACCG GCTGGGCCGTTGGTGTTGGGATGACCACACTGGTGAACCCAATTATGTTT GCAAGTATTGGAAGTCGCAGTTACTTCCTCCTCGCTGGATTAAATCTTCT GTGGGTTCCAACTATTTACCTTTTCTACCCAGAGACCCGCAACCGGACTC TAGAGTCTATTGACTACCTGTTCTCGACCTCGGGTCCATTTTATTGGGAT ATGGAGAGGGCCTTCAGGCTGTGCATGGATGGGAAGGTGGAGGAGCATGT CGATGAGCAGGCCATAAAGGGTGCGGGCCAGCATGAAACCCAGCAGGAGT TTCATGAGAACATCCAGAATAGAGTGTAAGCTGTTACTGCATATTCTCCT GTTCTGCTTCGACAGGCGGGCTACAGCGAGCTGACCCAAAATGGCCTTGC TGGAGGATTAAATACAATTGGTATTTTCGGCACTATAATCAGTACGCAAA TCGTAGATCGGATTGGAAGGCGAAAATGTTTGATGCTTGGCTCTACTATC TTGTTTGTCGTCGAGCTTGTGATCTAGGAATCTCCGTCGCATACTGGCTG TCATTTGGTCTTGCTTTCATCAATAATGGTTATTCCGATATTCGCTGGCG CTTTTTGTTGGCGTTTCAGTGCATTCCAGCACTCATCTTGCTGTTGTTTA TCAAGATGCTTCCAGATAGTCCACGGTTCCTTGCATCTGTCGGTCGTTAT GACGAAGCTCAGCAGGTTCTTAACAAGATCCGTTGCCATAGAGCCAGCCA ATCAGAGATTGACCTCGAATACAAAGAAATCATTGCGACTGTGCAAGAAG GCAAACCAAGCTCGCCCCTTCAGTTCGCCAAAATATTGATCGGCAAAGGA GGAAGCCCTGGCTCCAATCTGGGTCGACGCGCCTGGCTGTGTATATGGCT CCAGATCATGGCGTCCTGGACTGGTATTACGCATTGACTGGCATAGCACC AGTACTGGTATCAGAGACGTCAACAGCTGATCACCGCGGAGCCTTCCTTG GATATGTTTTCATTGCAAACTATGGGGTATGCAACGTTTTGGAGGCGGTT ATCCCCACGCCAACTCAATGTTATGATTCAGACCCTTTCTCTCGTTTGCA TATTCTTCGAGGGATATGATCAAGGTGTCATGGGAGGCGTCAACAGCTCT CCCAGATACGTTACAGAGGTTGGAATTGGCGAACCAGATGGCACAGTAAC CGACACCACCCATCAAGGAGGCATTGTCAGCATCTACTACCTTGGATGCA TTTTTGGTTGTTTCGGAGGTGGCTGGCTGGCTGATCGGTTAGGCCGCATC AATGGCCTCCTGGTCGGTTCTTTGCTTGCGCTTGTGGGAGGTGCTTTGCA AGCTGCAGCTCAGAGTTCAAATTTCATGCTCGTCGCCAGGGTGGTGACAG GCGTTGGCACTGGTGGCGGGATCTGTCTACGAGGCGTCCCTTCATCAGCC GGATAAAGCCAGCCAATTTGCACCTGCTGCTGTTGCGATGCTGTTCCTGT TCAACTTGGGATATGCCGCGACCTGGGGAACCGTCGCTTTCTTGATACCA ACCGAGATCTTTCCCTCCGACCTCCGGGCTCAAGGTAACGGCTTTGGCAT CACCGGCTGGGCCGTTGGTGTTGGGATGACCACACTGGTGAACCCAATTA TGTTTGCAAGTATTGGAAGTCGCAGTTACTTCCTCCTCGCTGGATTAAAT CTTCTGTGGGTTCCAACTATTTACCTTTTCTACCCAGAGACCCGCAACCG GACTCTAGAGTCTATTGACTACCTGTTCTCGACCTCGGGTCCATTTTATT GGGATATGGAGAGGGCCTTCAGGCTGTGCATGGATGGGAAGGTGGAGGAG CATGTCGATGAGCAGGCCATAAAGGGTGCGGGCCAGCATGAAACCCAGCA GGAGTTTCATGAGAACATCCAGAATAGAGTGTAAGCTGTTACTGCATATT CTCCTGTTCTGCTTCGACAGGCGGGCTACAGCGAGCTGACCCAAAATGGC CTTGCTGGAGGATTAAATACAATTGGTATTTTCGGCACTATAATCAGTAC GCAAATCGTAGATCGGATTGGAAGGCGAAAATGTTTGATGCTTGGCTCTA CTATCTTGTTTGTCGTCGAGCTTGTGATCTAGGAATCTCCGTCGCATACT GGCTGTCATTTGGTCTTGCTTTCATCAATAATGGTTATTCCGATATTCGC TGGCGCTTTTTGTTGGCGTTTCAGTGCATTCCAGCACTCATCTTGCTGTT GTTTATCAAGATGCTTCCAGATAGTCCACGGTTCCTTGCATCTGTCGGTC GTTATGACGAAGCTCAGCAGGTTCTTAACAAGATCCGTTGCCATAGAGCC AGCCAATCAGAGATTGACCTCGAATACAAAGAAATCATTGCGACTGTGCA AGAAGGCAAACCAAGCTCGCCCCTTCAGTTCGCCAAAATATTGATCGGCA AAGGAGGAAGCCCTGGCTCCAATCTGGGTCGACGCGCCTGGCTGTGTATA TGGCTCCAGATCATGGCGTCCTGGACTGGTATTACGCATTGACTGGCATA GCACCAGTACTGGTATCAGAGACGTCAACAGCTGATCACCGCGGAGCCTT CCTTGGATATGTTTTCATTGCAAACTATGGGGTATGCAACGTTTTGGAGG CGGTTATCCCCACGCCAACTCAATGTTATGATTCAGACCCTTTCTCTCGT TTGCATATTCTTCGAGGGATATGATCAAGGTGTCATGGGAGGCGTCAACA GCTCTCCCAGATACGTTACAGAGGTTGGAATTGGCGAACCAGATGGCACA GTAACCGACACCACCCATCAAGGAGGCATTGTCAGCATCTACTACCTTGG ATGCATTTTTGGTTGTTTCGGAGGTGGCTGGCTGGCTGATCGGTTAGGCC GCATCAATGGCCTCCTGGTCGGTTCTTTGCTTGCGCTTGTGGGAGGTGCT TTGCAAGCTGCAGCTCAGAGTTCAAATTTCATGCTCGTCGCCAGGGTGGT GACAGGCGTTGGCACTGGTGGCGGGATCTGTCTACGAGGCGTCCCTTCAT CAGCCGGATAAAGCCAGCCAATTTGCACCTGCTGCTGTTGCGATGCTGTT CCTGTTCAACTTGGGATATGCCGCGACCTGGGGAACCGTCGCTTTCTTGA TACCAACCGAGATCTTTCCCTCCGACCTCCGGGCTCAAGGTAACGGCTTT GGCATCACCGGCTGGGCCGTTGGTGTTGGGATGACCACACTGGTGAACCC AATTATGTTTGCAAGTATTGGAAGTCGCAGTTACTTCCTCCTCGCTGGAT TAAATCTTCTGTGGGTTCCAACTATTTACCTTTTCTACCCAGAGACCCGC AACCGGACTCTAGAGTCTATTGACTACCTGTTCTCGACCTCGGGTCCATT TTATTGGGATATGGAGAGGGCCTTCAGGCTGTGCATGGATGGGAAGGTGG AGGAGCATGTCGATGAGCAGGCCATAAAGGGTGCGGGCCAGCATGAAACC CAGCAGGAGTTTCATGAGAACATCCAGAATAGAGTGTAAGCTGTTACTGC ATATTCTCCTGTTCTGCTTCGACAGGCGGGCTACAGCGAGCTGACCCAAA ATGGCCTTGCTGGAGGATTAAATACAATTGGTATTTTCGGCACTATAATC AGTACGCAAATCGTAGATCGGATTGGAAGGCGAAAATGTTTGATGCTTGG CTCTACTATCTTGTTTGTCGTCGAGCTTGTGATCTAGGAATCTCCGTCGC ATACTGGCTGTCATTTGGTCTTGCTTTCATCAATAATGGTTATTCCGATA TTCGCTGGCGCTTTTTGTTGGCGTTTCAGTGCATTCCAGCACTCATCTTG CTGTTGTTTATCAAGATGCTTCCAGATAGTCCACGGTTCCTTGCATCTGT CGGTCGTTATGACGAAGCTCAGCAGGTTCTTAACAAGATCCGTTGCCATA GAGCCAGCCAATCAGAGATTGACCTCGAATACAAAGAAATCATTGCGACT GTGCAAGAAGGCAAACCAAGCTCGCCCCTTCAGTTCGCCAAAATATTGAT CGGCAAAGGAGGAAGCCCTGGCTCCAATCTGGGTCGACGCGCCTGGCTGT GTATATGGCTCCAGATCATGGCGTCCTGGACTGGTATTACGCATTGACTG GCATAGCACCAGTACTGGTATCAGAGACGTCAACAGCTGATCACCGCGGA GCCTTCCTTGGATATGTTTTCATTGCAAACTATGGGGTATGCAACGTTTT GGAGGCGGTTATCCCCACGCCAACTCAATGTTATGATTCAGACCCTTTCT CTCGTTTGCATATTCTTCGAGGGATATGATCAAGGTGTCATGGGAGGCGT CAACAGCTCTCCCAGATACGTTACAGAGGTTGGAATTGGCGAACCAGATG GCACAGTAACCGACACCACCCATCAAGGAGGCATTGTCAGCATCTACTAC CTTGGATGCATTTTTGGTTGTTTCGGAGGTGGCTGGCTGGCTGATCGGTT AGGCCGCATCAATGGCCTCCTGGTCGGTTCTTTGCTTGCGCTTGTGGGAG GTGCTTTGCAAGCTGCAGCTCAGAGTTCAAATTTCATGCTCGTCGCCAGG GTGGTGACAGGCGTTGGCACTGGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
GO:0016020 | membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009292-T1.utr3p1 | KJC3_009292-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009292-T1.utr5p1 | KJC3_009292-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR005829 |
DBxref | InterPro:IPR005828 |
DBxref | InterPro:IPR003663 |
DBxref | PFAM:PF00083 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:35864..38014 - |
|