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KJC3_009300-T2, KJC3_009300-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009300-T2
Unique NameKJC3_009300-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:59611..61428+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009300-T2 ID=KJC3_009300-T2|Name=KJC3_009300-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1818bp|location=Sequence derived from alignment at ch7:59611..61428+ (Aspergillus niger KJC3)
AGTCCACCTAACGGCATACTCAGCATACTCGATGCTGGGAATCACTTCAG
GTATGGTCGGCTGAATATGCAGTCGATTTCCGGCGCCAGGAACAGTCCGG
TCCCCTCACCACGGACATAGACCCGCCACCAAAACGTCGATAGCGGCCTC
GCTTCGTCAACGACCATTTTGCCCACCCCTGACACCCAGGAAAGACGGCT
TCCGGTAACAATATAAAAGGGCGAGTCTTGTCCTCTTACTTTCCGTCTTT
CGAGTATGCCTTGCCAGTTCCTAACTTGACTTGAGACCTCCCATTTCGTT
CATTTGTCGCCCGCTATAAGAATGGCCCGTCAGCTTATCCTGATCAGCAG
TCTGCTGGCAGCTGTTGCTGTGCGCGCGGCGCCTGCCGATCCGGCTCATC
CCATGGTTACGGAAGCGCCTGACGTCAATTTGGTTGAAAAGAGAGCGACT
ACTTGCACCTTCTCGGGCTCCGAAGGTGCATCCAAGGCCAGCAAGTCGAA
AACCTCTTGCTCCACAATCTACCTGTCCGACGTGGCCGTCCCATCTGGCA
CAACCCTTGATCTCTCTGACCTGAATGATGGAACCCACGTACGTTCCCCG
GGTGATTCATGTCTTATTCTCACCCCCAAACGCGTCAATGGTACCGGCTG
ACAGATGTACTAGGTGATCTTCCAGGGAGAAACCACTTTTGGCTACGAGG
AATGGGAAGGGCCTCTTGTGCGTGTTTCTGGGACTGATATCACGGTTGAG
GGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTGGTGGGATGG
AGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAATTCTTCTATGCCCATG
ACTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAACTCTCCTGTG
CAGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGACTGATATCAC
GGTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCAATACGGATG
GCTTCGACATCGGGGAAAGTACCTATATCACGATCACAGGTGCCGAAATC
TACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGGTATGCGTCCC
CTGGGCACTGGTTGAGAGGGGAGACGCATTGCTGACCATCCCGTAGAACA
TTTATTTCAGTGCCAGTGTGTGTTCTGGTGGCCACGGCCTGTCCATTGGC
TCTGTTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTATGA
TGTCAATGTTCTCAAGTCCCAGCAAGGTAAGGGAACGCATTTGAGCCTTC
CGTTTGCCGTCGTCTAACGTGTGCTTTAGCAATCCGTATCAAGACCATCT
ACGGCGACACTGGCTCCGTCAGCGAAGTCACTTACCATGAGATTGCCTTT
TCGGACGCTACTGATTACGGCATTGTTATTGAGCAGAACTATGATGACAC
CTCCAAGACCCCCACTACCGGGGTACCGATCACGGATTTTGTGCTCGAGA
ACATCATTGGAACGTGTGCAGATGATGATTGTACCGAAGTATACATTGCC
TGCGGTGATGGCAGCTGTTCGGACTGGACTTGGACCGGCGTGAGCGTGAC
CGGCGGCAGTGTCAGTGACGACTGCCTTAATGTTCCCTCCGGAATTAGCT
GCGATTTGTAGGCCGTTGTGATTGGGAGAGATGTTCCCGGGTACTCTGGT
GATTCGTTTAGCCAGCCCTTTCTGTTGAGTGGCCTGTTCTTCTATACTGT
CGATTGTGTGTGAGATTACTACCTTGCCCGAGGAAAGAGCAGTTCATCCT
ATCGTTTATTCTTTGCCG
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Coding sequence (CDS) from alignment at ch7:59611..61428+

>KJC3_009300-T2 ID=KJC3_009300-T2|Name=KJC3_009300-T2|organism=Aspergillus niger KJC3|type=CDS|length=4296bp|location=Sequence derived from alignment at ch7:59611..61428+ (Aspergillus niger KJC3)
ATGGTTACGGAAGCGCCTGACGTCAATTTGGTTGAAAAGAGAGCGACTAC
TTGCACCTTCTCGGGCTCCGAAGGTGCATCCAAGGCCAGCAAGTCGAAAA
CCTCTTGCTCCACAATCTACCTGTCCGACGTGGCCGTCCCATCTGGCACA
ACCCTTGATCTCTCTGACCTGAATGATGGAACCCACGTGATCTTCCAGGG
AGAAACCACTTTTGGCTACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTT
CTGGGACTGATATCACGGTTGAGGGGGAGAGCGACGCGGTGCTCAATGGC
GATGGCAGCCGCTGGTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAA
GCCCAAATTCTTCTATGCCCATGACTTGACCTCTTCCACCATCAAGAGCA
TCTACATCGAGAACTCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACT
GATCTTACCATGACTGATATCACGGTGGATAACACGGATGGTGACACGGA
CGACCTCGCCGCCAATACGGATGGCTTCGACATCGGGGAAAGTACCTATA
TCACGATCACAGGTGCCGAAATCTACAACCAAGATGACTGCGTTGCCATC
AATTCTGGAGAGAACATTTATTTCAGTGCCAGTGTGTGTTCTGGTGGCCA
CGGCCTGTCCATTGGCTCTGTTGGTGGTCGGGATGATAACACTGTCAAGA
ACGTGACGTTTTATGATGTCAATGTTCTCAAGTCCCAGCAAGCAATCCGT
ATCAAGACCATCTACGGCGACACTGGCTCCGTCAGCGAAGTCACTTACCA
TGAGATTGCCTTTTCGGACGCTACTGATTACGGCATTGTTATTGAGCAGA
ACTATGATGACACCTCCAAGACCCCCACTACCGGGGTACCGATCACGGAT
TTTGTGCTCGAGAACATCATTGGAACGTGTGCAGATGATGATTGTACCGA
AGTATACATTGCCTGCGGTGATGGCAGCTGTTCGGACTGGACTTGGACCG
GCGTGAGCGTGACCGGCGGCAGTGTCAGTGACGACTGCCTTAATGTTCCC
TCCGGAATTAGCTGCGATTTGTAGATGGTTACGGAAGCGCCTGACGTCAA
TTTGGTTGAAAAGAGAGCGACTACTTGCACCTTCTCGGGCTCCGAAGGTG
CATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTACCTGTCC
GACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACCTGAATGA
TGGAACCCACGTGATCTTCCAGGGAGAAACCACTTTTGGCTACGAGGAAT
GGGAAGGGCCTCTTGTGCGTGTTTCTGGGACTGATATCACGGTTGAGGGG
GAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTGGTGGGATGGAGA
GGGTGGCAATGGTGGTAAAACAAAGCCCAAATTCTTCTATGCCCATGACT
TGACCTCTTCCACCATCAAGAGCATCTACATCGAGAACTCTCCTGTGCAG
GTGTTCAGCATCGATGGCTCCACTGATCTTACCATGACTGATATCACGGT
GGATAACACGGATGGTGACACGGACGACCTCGCCGCCAATACGGATGGCT
TCGACATCGGGGAAAGTACCTATATCACGATCACAGGTGCCGAAATCTAC
AACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGAACATTTATTTCAG
TGCCAGTGTGTGTTCTGGTGGCCACGGCCTGTCCATTGGCTCTGTTGGTG
GTCGGGATGATAACACTGTCAAGAACGTGACGTTTTATGATGTCAATGTT
CTCAAGTCCCAGCAAGCAATCCGTATCAAGACCATCTACGGCGACACTGG
CTCCGTCAGCGAAGTCACTTACCATGAGATTGCCTTTTCGGACGCTACTG
ATTACGGCATTGTTATTGAGCAGAACTATGATGACACCTCCAAGACCCCC
ACTACCGGGGTACCGATCACGGATTTTGTGCTCGAGAACATCATTGGAAC
GTGTGCAGATGATGATTGTACCGAAGTATACATTGCCTGCGGTGATGGCA
GCTGTTCGGACTGGACTTGGACCGGCGTGAGCGTGACCGGCGGCAGTGTC
AGTGACGACTGCCTTAATGTTCCCTCCGGAATTAGCTGCGATTTGTAGAT
GGTTACGGAAGCGCCTGACGTCAATTTGGTTGAAAAGAGAGCGACTACTT
GCACCTTCTCGGGCTCCGAAGGTGCATCCAAGGCCAGCAAGTCGAAAACC
TCTTGCTCCACAATCTACCTGTCCGACGTGGCCGTCCCATCTGGCACAAC
CCTTGATCTCTCTGACCTGAATGATGGAACCCACGTGATCTTCCAGGGAG
AAACCACTTTTGGCTACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCT
GGGACTGATATCACGGTTGAGGGGGAGAGCGACGCGGTGCTCAATGGCGA
TGGCAGCCGCTGGTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAAGC
CCAAATTCTTCTATGCCCATGACTTGACCTCTTCCACCATCAAGAGCATC
TACATCGAGAACTCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACTGA
TCTTACCATGACTGATATCACGGTGGATAACACGGATGGTGACACGGACG
ACCTCGCCGCCAATACGGATGGCTTCGACATCGGGGAAAGTACCTATATC
ACGATCACAGGTGCCGAAATCTACAACCAAGATGACTGCGTTGCCATCAA
TTCTGGAGAGAACATTTATTTCAGTGCCAGTGTGTGTTCTGGTGGCCACG
GCCTGTCCATTGGCTCTGTTGGTGGTCGGGATGATAACACTGTCAAGAAC
GTGACGTTTTATGATGTCAATGTTCTCAAGTCCCAGCAAGCAATCCGTAT
CAAGACCATCTACGGCGACACTGGCTCCGTCAGCGAAGTCACTTACCATG
AGATTGCCTTTTCGGACGCTACTGATTACGGCATTGTTATTGAGCAGAAC
TATGATGACACCTCCAAGACCCCCACTACCGGGGTACCGATCACGGATTT
TGTGCTCGAGAACATCATTGGAACGTGTGCAGATGATGATTGTACCGAAG
TATACATTGCCTGCGGTGATGGCAGCTGTTCGGACTGGACTTGGACCGGC
GTGAGCGTGACCGGCGGCAGTGTCAGTGACGACTGCCTTAATGTTCCCTC
CGGAATTAGCTGCGATTTGTAGATGGTTACGGAAGCGCCTGACGTCAATT
TGGTTGAAAAGAGAGCGACTACTTGCACCTTCTCGGGCTCCGAAGGTGCA
TCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTACCTGTCCGA
CGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACCTGAATGATG
GAACCCACGTGATCTTCCAGGGAGAAACCACTTTTGGCTACGAGGAATGG
GAAGGGCCTCTTGTGCGTGTTTCTGGGACTGATATCACGGTTGAGGGGGA
GAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTGGTGGGATGGAGAGG
GTGGCAATGGTGGTAAAACAAAGCCCAAATTCTTCTATGCCCATGACTTG
ACCTCTTCCACCATCAAGAGCATCTACATCGAGAACTCTCCTGTGCAGGT
GTTCAGCATCGATGGCTCCACTGATCTTACCATGACTGATATCACGGTGG
ATAACACGGATGGTGACACGGACGACCTCGCCGCCAATACGGATGGCTTC
GACATCGGGGAAAGTACCTATATCACGATCACAGGTGCCGAAATCTACAA
CCAAGATGACTGCGTTGCCATCAATTCTGGAGAGAACATTTATTTCAGTG
CCAGTGTGTGTTCTGGTGGCCACGGCCTGTCCATTGGCTCTGTTGGTGGT
CGGGATGATAACACTGTCAAGAACGTGACGTTTTATGATGTCAATGTTCT
CAAGTCCCAGCAAGCAATCCGTATCAAGACCATCTACGGCGACACTGGCT
CCGTCAGCGAAGTCACTTACCATGAGATTGCCTTTTCGGACGCTACTGAT
TACGGCATTGTTATTGAGCAGAACTATGATGACACCTCCAAGACCCCCAC
TACCGGGGTACCGATCACGGATTTTGTGCTCGAGAACATCATTGGAACGT
GTGCAGATGATGATTGTACCGAAGTATACATTGCCTGCGGTGATGGCAGC
TGTTCGGACTGGACTTGGACCGGCGTGAGCGTGACCGGCGGCAGTGTCAG
TGACGACTGCCTTAATGTTCCCTCCGGAATTAGCTGCGATTTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009300KJC3_009300Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009300-T2KJC3_009300-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009300-T2.utr5p1KJC3_009300-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_009300-T2.utr5p2KJC3_009300-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009300-T2.exon1KJC3_009300-T2.exon1Aspergillus niger KJC3exon
KJC3_009300-T2.exon2KJC3_009300-T2.exon2Aspergillus niger KJC3exon
KJC3_009300-T2.exon3KJC3_009300-T2.exon3Aspergillus niger KJC3exon
KJC3_009300-T2.exon4KJC3_009300-T2.exon4Aspergillus niger KJC3exon
KJC3_009300-T2.exon5KJC3_009300-T2.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009300-T2.cdsKJC3_009300-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009300-T2.utr3p1KJC3_009300-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:59611..61428 +
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