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KJC3_009313-T1, KJC3_009313-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009313-T1
Unique NameKJC3_009313-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:86758..88269+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009313-T1 ID=KJC3_009313-T1|Name=KJC3_009313-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1512bp|location=Sequence derived from alignment at ch7:86758..88269+ (Aspergillus niger KJC3)
TAATAAGGAAAAGTTCATCCGGGGCGGGACGGTCCACAAAACCAGTCGCA
AGTTGCCAATTGTTGATCATGTCTATACCCTTGCTGGCCTGGTCGTGTTA
GCACAGTCCGAATCCAAGGGGACATCCCACTGGGCTCGGAAAGAAGCTCG
GAAAGTCGAGCAGTGGGTTCTCCAGGCAGAAACGGGACCGGAGGATTACT
GGTGAAACCCACCTGCAATACACGTAAATACCATTGGCGTCTCCCGTATC
ACAACTGTAATACCATTCGGAGCTTGCCCTGTTGGCGGCTCAAAACCTGT
CCATCACTGCCTCCTTCACTATTCAATTACATCCCTCAAATAGCCTCTTC
ATGTCCATTATGTACCTTTTACTTCCTCGCCATGCCTTATCTCAGCTCCA
AAGCCTTTTAGGCACTGTGAGCCAGTCGCAATGGCTCACGCGCGCATCCG
CCTCGTGCTGGCAGCCCTTCTGCTCTTCATTCTAACCTCCCTGCTCGCCC
CATTTTTTTGTAATCTTTACCTACTGCTGCGATTACCCTTCGTGTGGAAA
ACCTCATCTGCCAATGCGATTATCACCCAGCAACATGATGGATTCGATCT
GACCTTTTCCGACTACAACAGCACGTACTCCGTCGCTGACACCAGCCTGT
CCGTCCCTGTCCCTGCACGGCTGCATCACGTCCAACTGGGTGCACAATCC
CCACGTCCAGAGTGGCAGGCTGCTCGCGATGAGTGCCTCAAGCAACATCC
GGACTGGGAGACGTTTCTGTGGACCGACGAGAATGCTAGCCGCTTCGTCC
AGAATTACTACCCGCACTTTCTCCCCACCTGGGAAAATTATCCACACCTT
GTCCAGCGCGTGGATGCATTGCGATACATGGTCCTGCACAAGTATGGAGG
CGCCGTATTGGATTATGATTTGGCATGTAAACGGTCGTTGGAACCCCTGC
GTCGATTCGAATTTGTCGCGCCGGCGGCCAACCCAGTCGGTATCTCCGTT
GGCATGATGCTCGCGGCACCGAACAACTCCTATGTTAATGATCTGGTGCG
GAACCTGCCAAATTTTAATCGACGGTGGTCGTTTCTGCCTTACATCACAG
TTATGTTTAGCACGGGATGCCATTATGCCTCGTATGACTCTTTTTCGACG
CTCACAGAGGAATTGTATCGGAGCTAACAGGTTATAGAACCATCTACACC
ATGCAACGCCAAACCTCCACCCTCCGCGTCCTGACCGGTCCCCCCGAGAA
CCCGCGAATGCATATGCTCAACGGTGTGGTCAATACCCCGCTCTTTCGAC
ATTTAGGCAGTTCCTCATGGCATGAGAAAGACGCACGCTTCATCAAAGCG
TTTGCCAATATGGATCAACGGGTGGCGTTTGGGATGGTTTTGTTCGCTTT
GGTGGGAGGATGCTGGGCTGTGAGCTTATGTGTGTCTCGGTGTCGGGCAT
GGCATCAGAGGGAGGCAATCTCGCAAGAGATAGAGATGTTGCGGAAAGCA
CATGGTTCATAA
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Coding sequence (CDS) from alignment at ch7:86758..88269+

>KJC3_009313-T1 ID=KJC3_009313-T1|Name=KJC3_009313-T1|organism=Aspergillus niger KJC3|type=CDS|length=2052bp|location=Sequence derived from alignment at ch7:86758..88269+ (Aspergillus niger KJC3)
ATGGCTCACGCGCGCATCCGCCTCGTGCTGGCAGCCCTTCTGCTCTTCAT
TCTAACCTCCCTGCTCGCCCCATTTTTTTGTAATCTTTACCTACTGCTGC
GATTACCCTTCGTGTGGAAAACCTCATCTGCCAATGCGATTATCACCCAG
CAACATGATGGATTCGATCTGACCTTTTCCGACTACAACAGCACGTACTC
CGTCGCTGACACCAGCCTGTCCGTCCCTGTCCCTGCACGGCTGCATCACG
TCCAACTGGGTGCACAATCCCCACGTCCAGAGTGGCAGGCTGCTCGCGAT
GAGTGCCTCAAGCAACATCCGGACTGGGAGACGTTTCTGTGGACCGACGA
GAATGCTAGCCGCTTCGTCCAGAATTACTACCCGCACTTTCTCCCCACCT
GGGAAAATTATCCACACCTTGTCCAGCGCGTGGATGCATTGCGATACATG
GTCCTGCACAAGTATGGAGGCGCCGTATTGGATTATGATTTGGCATGTAA
ACGGTCGTTGGAACCCCTGCGTCGATTCGAATTTGTCGCGCCGGCGGCCA
ACCCAGTCGGTATCTCCGTTGGCATGATGCTCGCGGCACCGAACAACTCC
TATGTTAATGATCTGGTGCGGAACCTGCCAAATTTTAATCGACGGTGGTC
GTTTCTGCCTTACATCACAGTTATGTTTAGCACGGGATGCCATTATGCCT
CAACCATCTACACCATGCAACGCCAAACCTCCACCCTCCGCGTCCTGACC
GGTCCCCCCGAGAACCCGCGAATGCATATGCTCAACGGTGTGGTCAATAC
CCCGCTCTTTCGACATTTAGGCAGTTCCTCATGGCATGAGAAAGACGCAC
GCTTCATCAAAGCGTTTGCCAATATGGATCAACGGGTGGCGTTTGGGATG
GTTTTGTTCGCTTTGGTGGGAGGATGCTGGGCTGTGAGCTTATGTGTGTC
TCGGTGTCGGGCATGGCATCAGAGGGAGGCAATCTCGCAAGAGATAGAGA
TGTTGCGGAAAGCACATGGTTCATAAATGGCTCACGCGCGCATCCGCCTC
GTGCTGGCAGCCCTTCTGCTCTTCATTCTAACCTCCCTGCTCGCCCCATT
TTTTTGTAATCTTTACCTACTGCTGCGATTACCCTTCGTGTGGAAAACCT
CATCTGCCAATGCGATTATCACCCAGCAACATGATGGATTCGATCTGACC
TTTTCCGACTACAACAGCACGTACTCCGTCGCTGACACCAGCCTGTCCGT
CCCTGTCCCTGCACGGCTGCATCACGTCCAACTGGGTGCACAATCCCCAC
GTCCAGAGTGGCAGGCTGCTCGCGATGAGTGCCTCAAGCAACATCCGGAC
TGGGAGACGTTTCTGTGGACCGACGAGAATGCTAGCCGCTTCGTCCAGAA
TTACTACCCGCACTTTCTCCCCACCTGGGAAAATTATCCACACCTTGTCC
AGCGCGTGGATGCATTGCGATACATGGTCCTGCACAAGTATGGAGGCGCC
GTATTGGATTATGATTTGGCATGTAAACGGTCGTTGGAACCCCTGCGTCG
ATTCGAATTTGTCGCGCCGGCGGCCAACCCAGTCGGTATCTCCGTTGGCA
TGATGCTCGCGGCACCGAACAACTCCTATGTTAATGATCTGGTGCGGAAC
CTGCCAAATTTTAATCGACGGTGGTCGTTTCTGCCTTACATCACAGTTAT
GTTTAGCACGGGATGCCATTATGCCTCAACCATCTACACCATGCAACGCC
AAACCTCCACCCTCCGCGTCCTGACCGGTCCCCCCGAGAACCCGCGAATG
CATATGCTCAACGGTGTGGTCAATACCCCGCTCTTTCGACATTTAGGCAG
TTCCTCATGGCATGAGAAAGACGCACGCTTCATCAAAGCGTTTGCCAATA
TGGATCAACGGGTGGCGTTTGGGATGGTTTTGTTCGCTTTGGTGGGAGGA
TGCTGGGCTGTGAGCTTATGTGTGTCTCGGTGTCGGGCATGGCATCAGAG
GGAGGCAATCTCGCAAGAGATAGAGATGTTGCGGAAAGCACATGGTTCAT
AA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009313KJC3_009313Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009313-T1.utr5p1KJC3_009313-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009313-T1.exon1KJC3_009313-T1.exon1Aspergillus niger KJC3exon
KJC3_009313-T1.exon2KJC3_009313-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009313-T1.cdsKJC3_009313-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009313-T1KJC3_009313-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteCAZy:GT32
DBxrefInterPro:IPR029044
DBxrefInterPro:IPR007577
DBxrefPFAM:PF04488
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:86758..88269 +
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